EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001455 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine-rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 67291 bases
Position: chrNHOQ01001229.1:17564524-17631814
Accession: ZDB-GENE-030131-7887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002084	PPR	PF01535.20	2.8e-37	1	6
ENSGAFP00000002084	PPR	PF01535.20	2.8e-37	2	6
ENSGAFP00000002084	PPR	PF01535.20	2.8e-37	3	6
ENSGAFP00000002084	PPR	PF01535.20	2.8e-37	4	6
ENSGAFP00000002084	PPR	PF01535.20	2.8e-37	5	6
ENSGAFP00000002084	PPR	PF01535.20	2.8e-37	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002106	-	4523	-	ENSGAFP00000002084	1415 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001455	lrpprc	99	75.106	ENSAPOG00000016610	lrpprc	99	75.106	Acanthochromis_polyacanthus
ENSGAFG00000001455	lrpprc	94	52.659	ENSAMEG00000005852	LRPPRC	97	52.659	Ailuropoda_melanoleuca
ENSGAFG00000001455	lrpprc	100	71.036	ENSACIG00000009604	lrpprc	99	71.036	Amphilophus_citrinellus
ENSGAFG00000001455	lrpprc	99	75.579	ENSAOCG00000005886	lrpprc	99	75.579	Amphiprion_ocellaris
ENSGAFG00000001455	lrpprc	99	71.640	ENSAPEG00000002937	lrpprc	98	71.640	Amphiprion_percula
ENSGAFG00000001455	lrpprc	99	73.333	ENSATEG00000010555	lrpprc	99	71.947	Anabas_testudineus
ENSGAFG00000001455	lrpprc	95	56.352	ENSACAG00000029278	LRPPRC	99	54.749	Anolis_carolinensis
ENSGAFG00000001455	lrpprc	99	51.340	ENSANAG00000027440	LRPPRC	97	55.722	Aotus_nancymaae
ENSGAFG00000001455	lrpprc	96	69.376	ENSACLG00000023712	lrpprc	92	78.858	Astatotilapia_calliptera
ENSGAFG00000001455	lrpprc	99	51.058	ENSCJAG00000000794	LRPPRC	97	55.347	Callithrix_jacchus
ENSGAFG00000001455	lrpprc	98	51.977	ENSCHIG00000020173	LRPPRC	99	51.654	Capra_hircus
ENSGAFG00000001455	lrpprc	95	41.679	ENSCAPG00000013631	LRPPRC	99	41.679	Cavia_aperea
ENSGAFG00000001455	lrpprc	86	49.712	ENSCPOG00000000204	LRPPRC	99	49.712	Cavia_porcellus
ENSGAFG00000001455	lrpprc	99	50.770	ENSCCAG00000031900	LRPPRC	97	54.731	Cebus_capucinus
ENSGAFG00000001455	lrpprc	95	51.893	ENSCATG00000014187	LRPPRC	97	54.089	Cercocebus_atys
ENSGAFG00000001455	lrpprc	99	49.265	ENSCLAG00000005203	LRPPRC	99	49.265	Chinchilla_lanigera
ENSGAFG00000001455	lrpprc	95	52.190	ENSCSAG00000013233	LRPPRC	99	50.914	Chlorocebus_sabaeus
ENSGAFG00000001455	lrpprc	84	51.220	ENSCHOG00000003631	LRPPRC	84	51.220	Choloepus_hoffmanni
ENSGAFG00000001455	lrpprc	95	50.111	ENSCANG00000034961	LRPPRC	99	59.420	Colobus_angolensis_palliatus
ENSGAFG00000001455	lrpprc	99	49.859	ENSCGRG00001016261	Lrpprc	99	50.071	Cricetulus_griseus_chok1gshd
ENSGAFG00000001455	lrpprc	99	49.859	ENSCGRG00000004072	Lrpprc	99	50.071	Cricetulus_griseus_crigri
ENSGAFG00000001455	lrpprc	99	51.989	ENSCSEG00000003850	lrpprc	96	59.375	Cynoglossus_semilaevis
ENSGAFG00000001455	lrpprc	99	83.864	ENSCVAG00000012967	lrpprc	99	83.864	Cyprinodon_variegatus
ENSGAFG00000001455	lrpprc	99	58.130	ENSDARG00000043970	lrpprc	98	58.130	Danio_rerio
ENSGAFG00000001455	lrpprc	99	50.881	ENSDNOG00000012594	-	99	50.913	Dasypus_novemcinctus
ENSGAFG00000001455	lrpprc	77	42.144	ENSDNOG00000032336	-	95	42.144	Dasypus_novemcinctus
ENSGAFG00000001455	lrpprc	99	50.317	ENSDORG00000012233	Lrpprc	99	50.422	Dipodomys_ordii
ENSGAFG00000001455	lrpprc	99	51.541	ENSETEG00000006657	LRPPRC	99	51.784	Echinops_telfairi
ENSGAFG00000001455	lrpprc	73	54.613	ENSEEUG00000012340	LRPPRC	80	54.613	Erinaceus_europaeus
ENSGAFG00000001455	lrpprc	95	59.985	ENSELUG00000012803	lrpprc	99	59.985	Esox_lucius
ENSGAFG00000001455	lrpprc	99	51.515	ENSFCAG00000013468	LRPPRC	99	51.688	Felis_catus
ENSGAFG00000001455	lrpprc	94	49.925	ENSFALG00000012738	LRPPRC	98	49.925	Ficedula_albicollis
ENSGAFG00000001455	lrpprc	99	48.500	ENSFDAG00000015328	LRPPRC	99	48.500	Fukomys_damarensis
ENSGAFG00000001455	lrpprc	99	79.689	ENSFHEG00000019604	lrpprc	99	79.689	Fundulus_heteroclitus
ENSGAFG00000001455	lrpprc	99	62.853	ENSGMOG00000008337	lrpprc	99	62.853	Gadus_morhua
ENSGAFG00000001455	lrpprc	99	70.106	ENSGACG00000010679	lrpprc	99	72.107	Gasterosteus_aculeatus
ENSGAFG00000001455	lrpprc	100	76.247	ENSHBUG00000000393	lrpprc	98	76.247	Haplochromis_burtoni
ENSGAFG00000001455	lrpprc	99	48.565	ENSHGLG00000006123	LRPPRC	99	48.565	Heterocephalus_glaber_female
ENSGAFG00000001455	lrpprc	59	48.223	ENSHGLG00100005960	-	99	48.223	Heterocephalus_glaber_male
ENSGAFG00000001455	lrpprc	98	71.315	ENSHCOG00000002107	lrpprc	100	71.315	Hippocampus_comes
ENSGAFG00000001455	lrpprc	99	62.132	ENSIPUG00000009406	lrpprc	99	62.132	Ictalurus_punctatus
ENSGAFG00000001455	lrpprc	99	50.106	ENSSTOG00000011185	LRPPRC	99	50.564	Ictidomys_tridecemlineatus
ENSGAFG00000001455	lrpprc	99	49.541	ENSJJAG00000020475	Lrpprc	99	49.647	Jaculus_jaculus
ENSGAFG00000001455	lrpprc	98	66.547	ENSKMAG00000003287	lrpprc	84	66.547	Kryptolebias_marmoratus
ENSGAFG00000001455	lrpprc	99	63.073	ENSLBEG00000023225	lrpprc	96	71.984	Labrus_bergylta
ENSGAFG00000001455	lrpprc	99	58.281	ENSLACG00000014030	LRPPRC	99	58.281	Latimeria_chalumnae
ENSGAFG00000001455	lrpprc	99	61.759	ENSLOCG00000016390	lrpprc	97	61.759	Lepisosteus_oculatus
ENSGAFG00000001455	lrpprc	99	48.953	ENSLAFG00000008614	LRPPRC	99	48.987	Loxodonta_africana
ENSGAFG00000001455	lrpprc	95	52.116	ENSMFAG00000041560	LRPPRC	99	58.571	Macaca_fascicularis
ENSGAFG00000001455	lrpprc	95	51.558	ENSMMUG00000019841	LRPPRC	99	58.571	Macaca_mulatta
ENSGAFG00000001455	lrpprc	99	50.635	ENSMNEG00000031613	LRPPRC	98	53.704	Macaca_nemestrina
ENSGAFG00000001455	lrpprc	98	63.559	ENSMAMG00000021835	lrpprc	98	63.649	Mastacembelus_armatus
ENSGAFG00000001455	lrpprc	100	76.247	ENSMZEG00005027379	lrpprc	99	76.247	Maylandia_zebra
ENSGAFG00000001455	lrpprc	99	49.894	ENSMAUG00000012118	Lrpprc	99	50.371	Mesocricetus_auratus
ENSGAFG00000001455	lrpprc	99	51.125	ENSMICG00000010486	LRPPRC	98	53.803	Microcebus_murinus
ENSGAFG00000001455	lrpprc	99	51.058	ENSMOCG00000006048	Lrpprc	99	51.058	Microtus_ochrogaster
ENSGAFG00000001455	lrpprc	99	67.230	ENSMMOG00000007830	lrpprc	94	77.104	Mola_mola
ENSGAFG00000001455	lrpprc	95	51.656	ENSMODG00000000648	LRPPRC	99	51.656	Monodelphis_domestica
ENSGAFG00000001455	lrpprc	99	69.225	ENSMALG00000001271	lrpprc	99	69.296	Monopterus_albus
ENSGAFG00000001455	lrpprc	99	52.662	ENSMPUG00000011800	LRPPRC	100	52.975	Mustela_putorius_furo
ENSGAFG00000001455	lrpprc	99	51.581	ENSMLUG00000010575	LRPPRC	99	51.789	Myotis_lucifugus
ENSGAFG00000001455	lrpprc	99	50.176	ENSNGAG00000013069	Lrpprc	99	50.176	Nannospalax_galili
ENSGAFG00000001455	lrpprc	94	68.084	ENSNBRG00000013202	lrpprc	92	78.224	Neolamprologus_brichardi
ENSGAFG00000001455	lrpprc	99	50.561	ENSNLEG00000016782	LRPPRC	97	54.512	Nomascus_leucogenys
ENSGAFG00000001455	lrpprc	87	55.738	ENSOPRG00000016774	LRPPRC	92	45.791	Ochotona_princeps
ENSGAFG00000001455	lrpprc	99	49.402	ENSODEG00000011211	LRPPRC	99	49.404	Octodon_degus
ENSGAFG00000001455	lrpprc	100	76.458	ENSONIG00000000917	lrpprc	99	75.549	Oreochromis_niloticus
ENSGAFG00000001455	lrpprc	54	47.876	ENSOANG00000014670	-	100	47.876	Ornithorhynchus_anatinus
ENSGAFG00000001455	lrpprc	99	50.912	ENSOCUG00000015046	LRPPRC	95	50.976	Oryctolagus_cuniculus
ENSGAFG00000001455	lrpprc	99	70.934	ENSORLG00000004605	lrpprc	96	70.934	Oryzias_latipes
ENSGAFG00000001455	lrpprc	91	74.690	ENSORLG00020012536	lrpprc	99	74.701	Oryzias_latipes_hni
ENSGAFG00000001455	lrpprc	99	69.024	ENSORLG00015018270	lrpprc	92	76.143	Oryzias_latipes_hsok
ENSGAFG00000001455	lrpprc	99	50.809	ENSOGAG00000012798	LRPPRC	99	50.947	Otolemur_garnettii
ENSGAFG00000001455	lrpprc	95	52.780	ENSOARG00000006522	LRPPRC	99	51.654	Ovis_aries
ENSGAFG00000001455	lrpprc	99	49.790	ENSPPAG00000040876	LRPPRC	98	53.875	Pan_paniscus
ENSGAFG00000001455	lrpprc	99	51.547	ENSPPRG00000006578	LRPPRC	99	51.547	Panthera_pardus
ENSGAFG00000001455	lrpprc	95	52.858	ENSPTIG00000000933	LRPPRC	96	52.858	Panthera_tigris_altaica
ENSGAFG00000001455	lrpprc	99	50.880	ENSPTRG00000011880	LRPPRC	98	54.259	Pan_troglodytes
ENSGAFG00000001455	lrpprc	95	51.819	ENSPANG00000020731	LRPPRC	97	53.903	Papio_anubis
ENSGAFG00000001455	lrpprc	95	48.968	ENSPKIG00000022232	lrpprc	97	58.527	Paramormyrops_kingsleyae
ENSGAFG00000001455	lrpprc	61	54.661	ENSPSIG00000006830	-	98	54.619	Pelodiscus_sinensis
ENSGAFG00000001455	lrpprc	67	61.407	ENSPMGG00000016597	lrpprc	96	61.407	Periophthalmus_magnuspinnatus
ENSGAFG00000001455	lrpprc	93	47.178	ENSPMAG00000002147	lrpprc	99	47.178	Petromyzon_marinus
ENSGAFG00000001455	lrpprc	100	90.530	ENSPFOG00000011227	lrpprc	100	90.530	Poecilia_formosa
ENSGAFG00000001455	lrpprc	100	89.965	ENSPLAG00000004018	lrpprc	100	89.965	Poecilia_latipinna
ENSGAFG00000001455	lrpprc	100	90.247	ENSPMEG00000016425	lrpprc	100	90.247	Poecilia_mexicana
ENSGAFG00000001455	lrpprc	100	89.965	ENSPREG00000003662	lrpprc	100	89.965	Poecilia_reticulata
ENSGAFG00000001455	lrpprc	57	48.578	ENSPPYG00000029532	-	99	48.578	Pongo_abelii
ENSGAFG00000001455	lrpprc	77	53.578	ENSPCAG00000001430	LRPPRC	84	50.850	Procavia_capensis
ENSGAFG00000001455	lrpprc	99	49.083	ENSPVAG00000002007	LRPPRC	99	49.260	Pteropus_vampyrus
ENSGAFG00000001455	lrpprc	100	66.877	ENSPNYG00000000756	lrpprc	90	78.132	Pundamilia_nyererei
ENSGAFG00000001455	lrpprc	99	64.336	ENSPNAG00000002895	lrpprc	99	64.336	Pygocentrus_nattereri
ENSGAFG00000001455	lrpprc	99	50.247	ENSRNOG00000005877	Lrpprc	99	50.318	Rattus_norvegicus
ENSGAFG00000001455	lrpprc	99	49.579	ENSRBIG00000031552	LRPPRC	99	49.860	Rhinopithecus_bieti
ENSGAFG00000001455	lrpprc	99	51.058	ENSSBOG00000011807	LRPPRC	97	55.722	Saimiri_boliviensis_boliviensis
ENSGAFG00000001455	lrpprc	95	50.778	ENSSHAG00000018725	LRPPRC	99	50.778	Sarcophilus_harrisii
ENSGAFG00000001455	lrpprc	99	55.911	ENSSFOG00015001042	lrpprc	99	55.911	Scleropages_formosus
ENSGAFG00000001455	lrpprc	99	72.753	ENSSDUG00000019062	lrpprc	99	72.753	Seriola_dumerili
ENSGAFG00000001455	lrpprc	99	65.753	ENSSLDG00000023028	lrpprc	99	66.781	Seriola_lalandi_dorsalis
ENSGAFG00000001455	lrpprc	90	49.307	ENSSARG00000000426	LRPPRC	99	49.307	Sorex_araneus
ENSGAFG00000001455	lrpprc	100	65.534	ENSSPAG00000000162	lrpprc	100	65.811	Stegastes_partitus
ENSGAFG00000001455	lrpprc	99	50.881	ENSSSCG00000008452	LRPPRC	99	50.881	Sus_scrofa
ENSGAFG00000001455	lrpprc	93	49.132	ENSTGUG00000003759	LRPPRC	99	49.132	Taeniopygia_guttata
ENSGAFG00000001455	lrpprc	99	68.417	ENSTRUG00000008409	lrpprc	96	68.417	Takifugu_rubripes
ENSGAFG00000001455	lrpprc	99	66.925	ENSTNIG00000007470	lrpprc	99	67.530	Tetraodon_nigroviridis
ENSGAFG00000001455	lrpprc	99	49.403	ENSTTRG00000006403	LRPPRC	99	49.544	Tursiops_truncatus
ENSGAFG00000001455	lrpprc	95	49.703	ENSVPAG00000008993	LRPPRC	99	49.703	Vicugna_pacos
ENSGAFG00000001455	lrpprc	99	55.681	ENSXETG00000009296	lrpprc	99	55.893	Xenopus_tropicalis
ENSGAFG00000001455	lrpprc	99	79.529	ENSXCOG00000013343	lrpprc	95	84.736	Xiphophorus_couchianus
ENSGAFG00000001455	lrpprc	100	93.569	ENSXMAG00000018108	lrpprc	100	93.569	Xiphophorus_maculatus