EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000001693 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11029 bases
Position: chrNHOQ01001578.1:2385738-2396766
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002499	RNA_pol_L_2	PF13656.6	6.4e-30	1	1
ENSGAFP00000002462	RNA_pol_L_2	PF13656.6	6.6e-30	1	1
ENSGAFP00000002480	RNA_pol_L_2	PF13656.6	1.2e-29	1	1
ENSGAFP00000002485	RNA_pol_L_2	PF13656.6	5.9e-16	1	1
ENSGAFP00000002474	RNA_pol_L_2	PF13656.6	5.9e-16	1	1
ENSGAFP00000002499	RNA_pol_L	PF01193.24	1.1e-12	1	1
ENSGAFP00000002462	RNA_pol_L	PF01193.24	1.1e-12	1	1
ENSGAFP00000002480	RNA_pol_L	PF01193.24	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002528	-	3820	-	ENSGAFP00000002499	114 (aa)	-	UPI000DD2988B
ENSGAFT00000002514	-	3979	-	ENSGAFP00000002485	136 (aa)	-	-
ENSGAFT00000002502	-	3772	-	ENSGAFP00000002474	114 (aa)	-	-
ENSGAFT00000002509	-	2801	-	ENSGAFP00000002480	148 (aa)	-	-
ENSGAFT00000002489	-	3775	-	ENSGAFP00000002462	115 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000001693	polr1d	94	33.645	ENSGAFG00000019555	polr2j	89	33.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001693	polr1d	92	72.381	ENSG00000186184	POLR1D	91	72.381	Homo_sapiens
ENSGAFG00000001693	polr1d	90	85.437	ENSAPOG00000021882	polr1d	95	88.119	Acanthochromis_polyacanthus
ENSGAFG00000001693	polr1d	92	73.333	ENSAMEG00000019095	POLR1D	88	69.643	Ailuropoda_melanoleuca
ENSGAFG00000001693	polr1d	100	83.478	ENSACIG00000013328	polr1d	100	83.478	Amphilophus_citrinellus
ENSGAFG00000001693	polr1d	100	83.333	ENSAOCG00000018500	polr1d	100	83.333	Amphiprion_ocellaris
ENSGAFG00000001693	polr1d	100	84.211	ENSAPEG00000009489	polr1d	100	84.211	Amphiprion_percula
ENSGAFG00000001693	polr1d	100	86.842	ENSATEG00000019322	polr1d	100	86.842	Anabas_testudineus
ENSGAFG00000001693	polr1d	97	66.667	ENSACAG00000015753	POLR1D	96	66.667	Anolis_carolinensis
ENSGAFG00000001693	polr1d	92	72.381	ENSANAG00000024486	POLR1D	79	72.381	Aotus_nancymaae
ENSGAFG00000001693	polr1d	100	88.596	ENSACLG00000023805	polr1d	100	88.596	Astatotilapia_calliptera
ENSGAFG00000001693	polr1d	99	75.221	ENSAMXG00000036118	polr1d	98	75.221	Astyanax_mexicanus
ENSGAFG00000001693	polr1d	92	73.333	ENSBTAG00000033252	-	83	69.643	Bos_taurus
ENSGAFG00000001693	polr1d	92	73.333	ENSBTAG00000008642	POLR1D	83	69.643	Bos_taurus
ENSGAFG00000001693	polr1d	70	38.750	WBGene00010230	rpac-19	61	35.484	Caenorhabditis_elegans
ENSGAFG00000001693	polr1d	92	73.333	ENSCJAG00000044669	POLR1D	79	73.333	Callithrix_jacchus
ENSGAFG00000001693	polr1d	92	73.333	ENSCAFG00000006755	POLR1D	83	69.643	Canis_familiaris
ENSGAFG00000001693	polr1d	92	72.381	ENSCHIG00000021910	POLR1D	83	68.750	Capra_hircus
ENSGAFG00000001693	polr1d	91	74.038	ENSTSYG00000026817	-	78	74.038	Carlito_syrichta
ENSGAFG00000001693	polr1d	91	63.208	ENSTSYG00000034852	-	88	63.208	Carlito_syrichta
ENSGAFG00000001693	polr1d	56	60.938	ENSCAPG00000006058	-	65	60.938	Cavia_aperea
ENSGAFG00000001693	polr1d	56	60.938	ENSCPOG00000030450	-	65	60.938	Cavia_porcellus
ENSGAFG00000001693	polr1d	92	56.190	ENSCCAG00000020191	-	81	55.670	Cebus_capucinus
ENSGAFG00000001693	polr1d	92	73.333	ENSCCAG00000021349	-	79	73.333	Cebus_capucinus
ENSGAFG00000001693	polr1d	91	62.500	ENSCATG00000022900	-	77	62.500	Cercocebus_atys
ENSGAFG00000001693	polr1d	92	72.381	ENSCATG00000030710	-	79	72.381	Cercocebus_atys
ENSGAFG00000001693	polr1d	92	72.381	ENSCLAG00000017623	POLR1D	85	72.381	Chinchilla_lanigera
ENSGAFG00000001693	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSGAFG00000001693	polr1d	92	72.381	ENSCANG00000028632	-	79	72.381	Colobus_angolensis_palliatus
ENSGAFG00000001693	polr1d	91	72.115	ENSCANG00000037694	-	78	72.115	Colobus_angolensis_palliatus
ENSGAFG00000001693	polr1d	92	72.381	ENSCGRG00001021251	Polr1d	79	72.381	Cricetulus_griseus_chok1gshd
ENSGAFG00000001693	polr1d	92	72.381	ENSCGRG00000011639	Polr1d	79	72.381	Cricetulus_griseus_crigri
ENSGAFG00000001693	polr1d	93	84.906	ENSCSEG00000018268	polr1d	100	82.051	Cynoglossus_semilaevis
ENSGAFG00000001693	polr1d	100	90.351	ENSCVAG00000018527	polr1d	100	90.351	Cyprinodon_variegatus
ENSGAFG00000001693	polr1d	94	74.766	ENSDARG00000037570	polr1d	95	74.766	Danio_rerio
ENSGAFG00000001693	polr1d	92	70.476	ENSDNOG00000046247	-	78	70.476	Dasypus_novemcinctus
ENSGAFG00000001693	polr1d	92	71.429	ENSDNOG00000043676	-	79	71.429	Dasypus_novemcinctus
ENSGAFG00000001693	polr1d	91	73.077	ENSDORG00000029155	Polr1d	78	73.077	Dipodomys_ordii
ENSGAFG00000001693	polr1d	84	45.833	FBgn0086447	l(2)37Cg	90	45.833	Drosophila_melanogaster
ENSGAFG00000001693	polr1d	92	72.381	ENSETEG00000012797	POLR1D	85	72.381	Echinops_telfairi
ENSGAFG00000001693	polr1d	87	63.000	ENSEBUG00000011748	polr1d	77	56.410	Eptatretus_burgeri
ENSGAFG00000001693	polr1d	92	73.333	ENSEASG00005022487	POLR1D	81	73.333	Equus_asinus_asinus
ENSGAFG00000001693	polr1d	92	73.333	ENSEEUG00000013144	POLR1D	89	69.643	Erinaceus_europaeus
ENSGAFG00000001693	polr1d	97	77.679	ENSELUG00000005105	rpac2	98	77.679	Esox_lucius
ENSGAFG00000001693	polr1d	92	73.333	ENSFCAG00000030162	POLR1D	85	67.826	Felis_catus
ENSGAFG00000001693	polr1d	88	75.000	ENSFALG00000011463	POLR1D	100	74.257	Ficedula_albicollis
ENSGAFG00000001693	polr1d	92	71.429	ENSFDAG00000004463	POLR1D	79	71.429	Fukomys_damarensis
ENSGAFG00000001693	polr1d	100	89.474	ENSFHEG00000015410	polr1d	99	89.474	Fundulus_heteroclitus
ENSGAFG00000001693	polr1d	61	65.217	ENSGALG00000007470	POLR1D	68	65.217	Gallus_gallus
ENSGAFG00000001693	polr1d	94	86.916	ENSGACG00000018585	polr1d	91	86.916	Gasterosteus_aculeatus
ENSGAFG00000001693	polr1d	100	77.193	ENSGAGG00000008503	POLR1D	100	77.193	Gopherus_agassizii
ENSGAFG00000001693	polr1d	92	72.381	ENSGGOG00000004235	POLR1D	79	72.381	Gorilla_gorilla
ENSGAFG00000001693	polr1d	100	88.596	ENSHBUG00000002111	polr1d	100	88.596	Haplochromis_burtoni
ENSGAFG00000001693	polr1d	92	70.476	ENSHGLG00000003202	POLR1D	79	70.476	Heterocephalus_glaber_female
ENSGAFG00000001693	polr1d	92	70.476	ENSHGLG00100009393	POLR1D	79	70.476	Heterocephalus_glaber_male
ENSGAFG00000001693	polr1d	100	82.456	ENSHCOG00000003258	polr1d	100	82.456	Hippocampus_comes
ENSGAFG00000001693	polr1d	100	78.261	ENSIPUG00000014810	polr1d	100	78.261	Ictalurus_punctatus
ENSGAFG00000001693	polr1d	92	72.381	ENSSTOG00000013877	POLR1D	79	72.381	Ictidomys_tridecemlineatus
ENSGAFG00000001693	polr1d	92	70.476	ENSJJAG00000022671	-	88	70.476	Jaculus_jaculus
ENSGAFG00000001693	polr1d	92	55.238	ENSJJAG00000021667	-	64	53.097	Jaculus_jaculus
ENSGAFG00000001693	polr1d	100	86.842	ENSKMAG00000015256	polr1d	100	86.842	Kryptolebias_marmoratus
ENSGAFG00000001693	polr1d	100	86.842	ENSLBEG00000015919	polr1d	100	86.842	Labrus_bergylta
ENSGAFG00000001693	polr1d	94	67.593	ENSLACG00000006810	POLR1D	90	67.593	Latimeria_chalumnae
ENSGAFG00000001693	polr1d	62	87.324	ENSLOCG00000014976	polr1d	95	88.571	Lepisosteus_oculatus
ENSGAFG00000001693	polr1d	93	71.698	ENSLAFG00000032290	POLR1D	80	71.698	Loxodonta_africana
ENSGAFG00000001693	polr1d	92	72.381	ENSMFAG00000045264	POLR1D	81	72.381	Macaca_fascicularis
ENSGAFG00000001693	polr1d	92	72.381	ENSMMUG00000020386	POLR1D	91	72.381	Macaca_mulatta
ENSGAFG00000001693	polr1d	69	69.620	ENSMMUG00000041570	-	71	69.620	Macaca_mulatta
ENSGAFG00000001693	polr1d	91	58.654	ENSMNEG00000038120	-	76	58.654	Macaca_nemestrina
ENSGAFG00000001693	polr1d	92	72.381	ENSMNEG00000008630	-	79	72.381	Macaca_nemestrina
ENSGAFG00000001693	polr1d	92	72.381	ENSMLEG00000041048	-	79	72.381	Mandrillus_leucophaeus
ENSGAFG00000001693	polr1d	91	64.423	ENSMLEG00000032251	-	77	64.423	Mandrillus_leucophaeus
ENSGAFG00000001693	polr1d	88	88.000	ENSMAMG00000014834	polr1d	94	87.129	Mastacembelus_armatus
ENSGAFG00000001693	polr1d	91	84.615	ENSMZEG00005006638	polr1d	92	84.615	Maylandia_zebra
ENSGAFG00000001693	polr1d	81	79.348	ENSMGAG00000005322	POLR1D	84	79.348	Meleagris_gallopavo
ENSGAFG00000001693	polr1d	92	72.381	ENSMAUG00000001946	Polr1d	79	72.381	Mesocricetus_auratus
ENSGAFG00000001693	polr1d	86	59.184	ENSMICG00000007349	-	85	52.632	Microcebus_murinus
ENSGAFG00000001693	polr1d	92	71.429	ENSMICG00000016883	-	79	71.429	Microcebus_murinus
ENSGAFG00000001693	polr1d	92	71.429	ENSMOCG00000021288	Polr1d	79	71.429	Microtus_ochrogaster
ENSGAFG00000001693	polr1d	100	89.474	ENSMMOG00000009605	polr1d	100	89.474	Mola_mola
ENSGAFG00000001693	polr1d	100	75.439	ENSMODG00000023881	POLR1D	100	75.439	Monodelphis_domestica
ENSGAFG00000001693	polr1d	100	84.211	ENSMALG00000010652	polr1d	100	84.211	Monopterus_albus
ENSGAFG00000001693	polr1d	91	71.154	MGP_CAROLIEiJ_G0028034	Polr1d	78	71.154	Mus_caroli
ENSGAFG00000001693	polr1d	91	71.154	ENSMUSG00000029642	Polr1d	78	71.154	Mus_musculus
ENSGAFG00000001693	polr1d	91	71.154	MGP_PahariEiJ_G0024600	Polr1d	78	71.154	Mus_pahari
ENSGAFG00000001693	polr1d	91	71.154	MGP_SPRETEiJ_G0029032	Polr1d	78	71.154	Mus_spretus
ENSGAFG00000001693	polr1d	92	66.667	ENSMLUG00000004118	-	83	65.179	Myotis_lucifugus
ENSGAFG00000001693	polr1d	92	72.381	ENSMLUG00000027169	-	79	72.381	Myotis_lucifugus
ENSGAFG00000001693	polr1d	95	71.296	ENSNGAG00000006014	Polr1d	95	69.643	Nannospalax_galili
ENSGAFG00000001693	polr1d	100	88.596	ENSNBRG00000020327	polr1d	100	88.596	Neolamprologus_brichardi
ENSGAFG00000001693	polr1d	92	72.381	ENSNLEG00000000358	POLR1D	79	72.381	Nomascus_leucogenys
ENSGAFG00000001693	polr1d	92	72.381	ENSODEG00000005294	-	79	72.381	Octodon_degus
ENSGAFG00000001693	polr1d	92	60.952	ENSODEG00000014801	-	81	59.794	Octodon_degus
ENSGAFG00000001693	polr1d	93	80.189	ENSOANG00000008708	-	98	80.189	Ornithorhynchus_anatinus
ENSGAFG00000001693	polr1d	92	72.381	ENSOCUG00000015706	POLR1D	64	72.381	Oryctolagus_cuniculus
ENSGAFG00000001693	polr1d	100	84.211	ENSORLG00000010257	polr1d	100	84.211	Oryzias_latipes
ENSGAFG00000001693	polr1d	100	84.211	ENSORLG00020000533	polr1d	77	84.211	Oryzias_latipes_hni
ENSGAFG00000001693	polr1d	100	85.088	ENSORLG00015013267	polr1d	75	85.088	Oryzias_latipes_hsok
ENSGAFG00000001693	polr1d	100	84.211	ENSOMEG00000014912	polr1d	76	84.211	Oryzias_melastigma
ENSGAFG00000001693	polr1d	98	69.643	ENSOGAG00000014601	POLR1D	84	69.643	Otolemur_garnettii
ENSGAFG00000001693	polr1d	92	72.381	ENSOARG00000017005	POLR1D	85	68.750	Ovis_aries
ENSGAFG00000001693	polr1d	92	72.381	ENSPPAG00000028138	POLR1D	79	72.381	Pan_paniscus
ENSGAFG00000001693	polr1d	92	73.333	ENSPPRG00000003381	POLR1D	85	67.826	Panthera_pardus
ENSGAFG00000001693	polr1d	92	73.333	ENSPTIG00000018137	POLR1D	85	67.826	Panthera_tigris_altaica
ENSGAFG00000001693	polr1d	92	72.381	ENSPTRG00000005734	POLR1D	79	72.381	Pan_troglodytes
ENSGAFG00000001693	polr1d	91	63.462	ENSPANG00000035051	-	77	63.462	Papio_anubis
ENSGAFG00000001693	polr1d	92	72.381	ENSPANG00000020259	-	79	72.381	Papio_anubis
ENSGAFG00000001693	polr1d	95	74.312	ENSPKIG00000021891	polr1d	100	61.417	Paramormyrops_kingsleyae
ENSGAFG00000001693	polr1d	100	72.807	ENSPSIG00000011822	POLR1D	88	72.807	Pelodiscus_sinensis
ENSGAFG00000001693	polr1d	100	75.439	ENSPMGG00000012998	POLR1D	84	75.439	Periophthalmus_magnuspinnatus
ENSGAFG00000001693	polr1d	100	83.333	ENSPMGG00000010359	polr1d	99	83.333	Periophthalmus_magnuspinnatus
ENSGAFG00000001693	polr1d	92	71.429	ENSPEMG00000006336	-	81	71.429	Peromyscus_maniculatus_bairdii
ENSGAFG00000001693	polr1d	95	56.481	ENSPMAG00000004228	polr1d	91	56.481	Petromyzon_marinus
ENSGAFG00000001693	polr1d	100	74.561	ENSPCIG00000001673	POLR1D	100	74.561	Phascolarctos_cinereus
ENSGAFG00000001693	polr1d	100	99.123	ENSPFOG00000023343	polr1d	100	100.000	Poecilia_formosa
ENSGAFG00000001693	polr1d	100	99.123	ENSPLAG00000009675	polr1d	100	99.123	Poecilia_latipinna
ENSGAFG00000001693	polr1d	100	99.123	ENSPMEG00000004628	polr1d	100	99.123	Poecilia_mexicana
ENSGAFG00000001693	polr1d	100	99.123	ENSPREG00000022032	polr1d	100	99.123	Poecilia_reticulata
ENSGAFG00000001693	polr1d	92	70.476	ENSPCOG00000028175	POLR1D	79	70.476	Propithecus_coquereli
ENSGAFG00000001693	polr1d	100	88.596	ENSPNYG00000000107	polr1d	100	88.596	Pundamilia_nyererei
ENSGAFG00000001693	polr1d	96	71.560	ENSPNAG00000001512	polr1d	100	68.908	Pygocentrus_nattereri
ENSGAFG00000001693	polr1d	91	70.192	ENSRBIG00000000336	-	78	70.192	Rhinopithecus_bieti
ENSGAFG00000001693	polr1d	92	72.381	ENSRBIG00000036378	-	79	72.381	Rhinopithecus_bieti
ENSGAFG00000001693	polr1d	91	71.154	ENSRROG00000026751	-	78	71.154	Rhinopithecus_roxellana
ENSGAFG00000001693	polr1d	92	72.381	ENSRROG00000042232	-	79	72.381	Rhinopithecus_roxellana
ENSGAFG00000001693	polr1d	79	52.222	YNL113W	RPC19	70	48.485	Saccharomyces_cerevisiae
ENSGAFG00000001693	polr1d	87	69.697	ENSSBOG00000030146	-	82	63.063	Saimiri_boliviensis_boliviensis
ENSGAFG00000001693	polr1d	92	72.381	ENSSBOG00000028482	-	79	72.381	Saimiri_boliviensis_boliviensis
ENSGAFG00000001693	polr1d	97	72.973	ENSSHAG00000001190	POLR1D	86	72.973	Sarcophilus_harrisii
ENSGAFG00000001693	polr1d	94	79.630	ENSSFOG00015011375	polr1d	95	79.630	Scleropages_formosus
ENSGAFG00000001693	polr1d	100	87.719	ENSSMAG00000011861	polr1d	100	87.719	Scophthalmus_maximus
ENSGAFG00000001693	polr1d	100	86.842	ENSSDUG00000011930	polr1d	100	86.842	Seriola_dumerili
ENSGAFG00000001693	polr1d	99	78.947	ENSSLDG00000023871	polr1d	97	78.947	Seriola_lalandi_dorsalis
ENSGAFG00000001693	polr1d	92	73.333	ENSSARG00000007840	POLR1D	83	69.643	Sorex_araneus
ENSGAFG00000001693	polr1d	92	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSGAFG00000001693	polr1d	100	87.719	ENSSPAG00000011764	polr1d	100	87.719	Stegastes_partitus
ENSGAFG00000001693	polr1d	92	71.429	ENSSSCG00000009310	POLR1D	79	71.429	Sus_scrofa
ENSGAFG00000001693	polr1d	82	78.495	ENSTGUG00000005450	POLR1D	97	78.495	Taeniopygia_guttata
ENSGAFG00000001693	polr1d	100	81.579	ENSTRUG00000019741	polr1d	100	81.579	Takifugu_rubripes
ENSGAFG00000001693	polr1d	98	68.750	ENSTBEG00000007006	POLR1D	90	68.750	Tupaia_belangeri
ENSGAFG00000001693	polr1d	92	73.333	ENSUAMG00000011413	POLR1D	83	69.643	Ursus_americanus
ENSGAFG00000001693	polr1d	92	73.333	ENSUMAG00000016968	POLR1D	86	69.643	Ursus_maritimus
ENSGAFG00000001693	polr1d	92	73.333	ENSVVUG00000009216	POLR1D	83	69.643	Vulpes_vulpes
ENSGAFG00000001693	polr1d	89	97.030	ENSXCOG00000011731	polr1d	78	97.030	Xiphophorus_couchianus
ENSGAFG00000001693	polr1d	89	96.040	ENSXMAG00000017538	polr1d	78	96.040	Xiphophorus_maculatus