EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001732 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3247 bases
Position: chrNHOQ01001156.1:15333136-15336382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002521	RRM_1	PF00076.22	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002550	-	369	-	ENSGAFP00000002521	122 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001732's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001732	-	95	72.414	ENSG00000153914	SREK1	85	85.882	Homo_sapiens
ENSGAFG00000001732	-	68	69.880	ENSG00000116754	SRSF11	67	69.767	Homo_sapiens
ENSGAFG00000001732	-	67	68.293	ENSAPOG00000004488	-	75	69.136	Acanthochromis_polyacanthus
ENSGAFG00000001732	-	67	67.073	ENSAPOG00000007244	-	59	67.073	Acanthochromis_polyacanthus
ENSGAFG00000001732	-	68	67.470	ENSACIG00000012348	-	87	67.470	Amphilophus_citrinellus
ENSGAFG00000001732	-	100	83.333	ENSACIG00000015055	-	100	83.333	Amphilophus_citrinellus
ENSGAFG00000001732	-	67	68.293	ENSACIG00000018075	-	75	69.136	Amphilophus_citrinellus
ENSGAFG00000001732	-	72	95.455	ENSAOCG00000024368	-	89	95.455	Amphiprion_ocellaris
ENSGAFG00000001732	-	66	67.901	ENSAOCG00000000739	-	86	67.901	Amphiprion_ocellaris
ENSGAFG00000001732	-	72	63.636	ENSAPEG00000003142	SRSF11	91	63.636	Amphiprion_percula
ENSGAFG00000001732	-	71	97.701	ENSAPEG00000002218	-	95	97.701	Amphiprion_percula
ENSGAFG00000001732	-	67	68.293	ENSAPEG00000003619	SRSF11	75	69.136	Amphiprion_percula
ENSGAFG00000001732	-	70	94.186	ENSATEG00000009464	-	92	94.186	Anabas_testudineus
ENSGAFG00000001732	-	69	67.857	ENSATEG00000011691	srsf11	77	66.265	Anabas_testudineus
ENSGAFG00000001732	-	67	68.293	ENSATEG00000007534	-	75	69.136	Anabas_testudineus
ENSGAFG00000001732	-	98	70.833	ENSANAG00000031358	SREK1	85	85.882	Aotus_nancymaae
ENSGAFG00000001732	-	67	67.073	ENSACLG00000000623	srsf11	84	67.073	Astatotilapia_calliptera
ENSGAFG00000001732	-	66	90.123	ENSBTAG00000007321	SREK1	85	87.059	Bos_taurus
ENSGAFG00000001732	-	66	88.889	ENSCJAG00000015950	SREK1	85	85.882	Callithrix_jacchus
ENSGAFG00000001732	-	95	73.276	ENSCAFG00020019449	-	85	87.059	Canis_lupus_dingo
ENSGAFG00000001732	-	68	69.880	ENSCAFG00020017255	-	74	70.238	Canis_lupus_dingo
ENSGAFG00000001732	-	68	69.880	ENSCHIG00000025295	SRSF11	75	68.182	Capra_hircus
ENSGAFG00000001732	-	66	90.123	ENSCHIG00000025052	-	85	87.059	Capra_hircus
ENSGAFG00000001732	-	68	67.470	ENSTSYG00000033270	-	61	66.667	Carlito_syrichta
ENSGAFG00000001732	-	95	73.276	ENSTSYG00000036957	SREK1	85	87.059	Carlito_syrichta
ENSGAFG00000001732	-	98	70.833	ENSCCAG00000020591	SREK1	85	85.882	Cebus_capucinus
ENSGAFG00000001732	-	70	86.047	ENSCATG00000031482	SREK1	85	85.882	Cercocebus_atys
ENSGAFG00000001732	-	96	54.701	ENSCPBG00000022430	-	89	54.701	Chrysemys_picta_bellii
ENSGAFG00000001732	-	95	72.414	ENSCPBG00000026866	SREK1	88	72.414	Chrysemys_picta_bellii
ENSGAFG00000001732	-	72	84.091	ENSCANG00000030421	SREK1	85	85.882	Colobus_angolensis_palliatus
ENSGAFG00000001732	-	100	88.618	ENSCSEG00000013934	-	91	91.250	Cynoglossus_semilaevis
ENSGAFG00000001732	-	100	84.000	ENSCVAG00000002404	-	100	84.000	Cyprinodon_variegatus
ENSGAFG00000001732	-	68	66.265	ENSDARG00000098574	srsf11	91	66.265	Danio_rerio
ENSGAFG00000001732	-	95	75.000	ENSDORG00000023160	-	90	73.333	Dipodomys_ordii
ENSGAFG00000001732	-	68	69.880	ENSEASG00005007847	SRSF11	74	70.238	Equus_asinus_asinus
ENSGAFG00000001732	-	95	73.276	ENSEASG00005006832	-	75	87.059	Equus_asinus_asinus
ENSGAFG00000001732	-	95	73.276	ENSECAG00000035731	-	90	71.667	Equus_caballus
ENSGAFG00000001732	-	71	67.816	ENSFCAG00000034448	-	68	69.767	Felis_catus
ENSGAFG00000001732	-	66	90.123	ENSFCAG00000036884	-	85	87.059	Felis_catus
ENSGAFG00000001732	-	98	76.613	ENSFHEG00000020959	-	96	76.613	Fundulus_heteroclitus
ENSGAFG00000001732	-	66	90.123	ENSGALG00000043541	SREK1	82	90.123	Gallus_gallus
ENSGAFG00000001732	-	71	70.115	ENSGAGG00000022411	-	84	70.115	Gopherus_agassizii
ENSGAFG00000001732	-	95	72.414	ENSGAGG00000006087	SREK1	88	72.414	Gopherus_agassizii
ENSGAFG00000001732	-	95	72.414	ENSGGOG00000004737	SREK1	85	85.882	Gorilla_gorilla
ENSGAFG00000001732	-	98	82.114	ENSHBUG00000007082	-	90	82.114	Haplochromis_burtoni
ENSGAFG00000001732	-	66	92.593	ENSHCOG00000017228	-	80	91.860	Hippocampus_comes
ENSGAFG00000001732	-	67	67.073	ENSHCOG00000016860	-	84	67.073	Hippocampus_comes
ENSGAFG00000001732	-	66	90.123	ENSSTOG00000008850	SREK1	85	87.059	Ictidomys_tridecemlineatus
ENSGAFG00000001732	-	95	74.138	ENSJJAG00000008846	-	92	72.500	Jaculus_jaculus
ENSGAFG00000001732	-	98	81.890	ENSLBEG00000022954	-	92	81.890	Labrus_bergylta
ENSGAFG00000001732	-	68	66.265	ENSLBEG00000024167	srsf11	84	67.073	Labrus_bergylta
ENSGAFG00000001732	-	95	72.414	ENSMFAG00000039823	SREK1	85	85.882	Macaca_fascicularis
ENSGAFG00000001732	-	70	86.047	ENSMMUG00000014586	SREK1	79	84.884	Macaca_mulatta
ENSGAFG00000001732	-	70	86.047	ENSMNEG00000030723	SREK1	85	85.882	Macaca_nemestrina
ENSGAFG00000001732	-	66	88.889	ENSMLEG00000039078	SREK1	85	85.882	Mandrillus_leucophaeus
ENSGAFG00000001732	-	67	68.293	ENSMAMG00000015002	-	76	69.136	Mastacembelus_armatus
ENSGAFG00000001732	-	79	92.708	ENSMAMG00000003099	-	91	92.708	Mastacembelus_armatus
ENSGAFG00000001732	-	91	81.579	ENSMZEG00005005707	-	88	81.579	Maylandia_zebra
ENSGAFG00000001732	-	66	90.123	ENSMICG00000034959	SREK1	85	87.059	Microcebus_murinus
ENSGAFG00000001732	-	74	64.444	ENSMMOG00000008877	-	87	64.444	Mola_mola
ENSGAFG00000001732	-	68	68.675	ENSMMOG00000016751	-	78	68.675	Mola_mola
ENSGAFG00000001732	-	71	96.552	ENSMALG00000017086	srek1	98	96.552	Monopterus_albus
ENSGAFG00000001732	-	67	68.293	ENSMALG00000016608	srsf11	84	68.293	Monopterus_albus
ENSGAFG00000001732	-	67	71.951	MGP_CAROLIEiJ_G0025767	Srsf11	82	71.951	Mus_caroli
ENSGAFG00000001732	-	67	71.951	ENSMUSG00000055436	Srsf11	81	71.951	Mus_musculus
ENSGAFG00000001732	-	67	71.951	MGP_PahariEiJ_G0027217	Srsf11	82	71.951	Mus_pahari
ENSGAFG00000001732	-	67	71.951	MGP_SPRETEiJ_G0026719	Srsf11	82	71.951	Mus_spretus
ENSGAFG00000001732	-	95	75.000	ENSNGAG00000014631	-	90	73.333	Nannospalax_galili
ENSGAFG00000001732	-	98	82.114	ENSNBRG00000010656	-	90	82.114	Neolamprologus_brichardi
ENSGAFG00000001732	-	68	67.470	ENSNBRG00000020213	-	87	67.470	Neolamprologus_brichardi
ENSGAFG00000001732	-	72	84.091	ENSNLEG00000003827	SREK1	85	85.882	Nomascus_leucogenys
ENSGAFG00000001732	-	95	73.276	ENSODEG00000016218	-	83	88.235	Octodon_degus
ENSGAFG00000001732	-	62	96.053	ENSORLG00000002711	-	63	96.053	Oryzias_latipes
ENSGAFG00000001732	-	84	59.223	ENSORLG00000030366	-	88	59.223	Oryzias_latipes
ENSGAFG00000001732	-	95	77.586	ENSORLG00020012815	-	91	77.686	Oryzias_latipes_hni
ENSGAFG00000001732	-	84	59.223	ENSORLG00020009393	-	88	59.223	Oryzias_latipes_hni
ENSGAFG00000001732	-	84	59.223	ENSORLG00015009374	-	88	59.223	Oryzias_latipes_hsok
ENSGAFG00000001732	-	100	77.049	ENSORLG00015020455	-	95	77.049	Oryzias_latipes_hsok
ENSGAFG00000001732	-	95	72.414	ENSPPAG00000031605	SREK1	79	84.884	Pan_paniscus
ENSGAFG00000001732	-	66	90.123	ENSPPRG00000024617	SREK1	85	87.059	Panthera_pardus
ENSGAFG00000001732	-	66	90.123	ENSPTIG00000006608	SREK1	85	87.059	Panthera_tigris_altaica
ENSGAFG00000001732	-	95	72.414	ENSPTRG00000016936	SREK1	85	85.882	Pan_troglodytes
ENSGAFG00000001732	-	95	72.414	ENSPANG00000008953	SREK1	85	85.882	Papio_anubis
ENSGAFG00000001732	-	68	66.265	ENSPKIG00000021576	-	87	66.265	Paramormyrops_kingsleyae
ENSGAFG00000001732	-	68	66.265	ENSPMGG00000000954	-	78	66.265	Periophthalmus_magnuspinnatus
ENSGAFG00000001732	-	69	65.476	ENSPMGG00000005045	-	74	65.476	Periophthalmus_magnuspinnatus
ENSGAFG00000001732	-	72	89.773	ENSPMGG00000017029	-	77	89.773	Periophthalmus_magnuspinnatus
ENSGAFG00000001732	-	98	97.479	ENSPLAG00000014609	-	88	97.479	Poecilia_latipinna
ENSGAFG00000001732	-	67	68.293	ENSPLAG00000009484	-	56	69.136	Poecilia_latipinna
ENSGAFG00000001732	-	98	97.479	ENSPLAG00000008818	-	88	97.479	Poecilia_latipinna
ENSGAFG00000001732	-	69	65.476	ENSPMEG00000018837	srsf11	69	65.476	Poecilia_mexicana
ENSGAFG00000001732	-	98	97.479	ENSPMEG00000006607	-	88	97.479	Poecilia_mexicana
ENSGAFG00000001732	-	67	68.293	ENSPMEG00000023453	-	56	69.136	Poecilia_mexicana
ENSGAFG00000001732	-	98	97.479	ENSPMEG00000006824	-	88	97.479	Poecilia_mexicana
ENSGAFG00000001732	-	100	83.200	ENSPREG00000019922	-	100	83.200	Poecilia_reticulata
ENSGAFG00000001732	-	95	73.276	ENSPCOG00000026230	SREK1	85	87.059	Propithecus_coquereli
ENSGAFG00000001732	-	98	82.114	ENSPNYG00000007178	-	90	82.114	Pundamilia_nyererei
ENSGAFG00000001732	-	71	67.816	ENSRBIG00000042971	SRSF11	71	66.304	Rhinopithecus_bieti
ENSGAFG00000001732	-	95	72.414	ENSRBIG00000033818	SREK1	85	85.882	Rhinopithecus_bieti
ENSGAFG00000001732	-	72	84.091	ENSRROG00000017210	SREK1	85	85.882	Rhinopithecus_roxellana
ENSGAFG00000001732	-	71	67.816	ENSSBOG00000033461	SRSF11	71	66.304	Saimiri_boliviensis_boliviensis
ENSGAFG00000001732	-	98	70.833	ENSSBOG00000031230	SREK1	85	85.882	Saimiri_boliviensis_boliviensis
ENSGAFG00000001732	-	78	61.053	ENSSFOG00015016086	-	85	61.053	Scleropages_formosus
ENSGAFG00000001732	-	75	94.565	ENSSDUG00000010395	-	89	94.565	Seriola_dumerili
ENSGAFG00000001732	-	67	68.293	ENSSLDG00000012105	-	75	69.136	Seriola_lalandi_dorsalis
ENSGAFG00000001732	-	75	94.565	ENSSLDG00000016285	-	89	94.565	Seriola_lalandi_dorsalis
ENSGAFG00000001732	-	67	67.073	ENSSLDG00000015477	-	84	67.073	Seriola_lalandi_dorsalis
ENSGAFG00000001732	-	68	67.470	ENSSPAG00000016483	-	66	67.470	Stegastes_partitus
ENSGAFG00000001732	-	71	95.402	ENSSPAG00000022310	-	88	95.402	Stegastes_partitus
ENSGAFG00000001732	-	100	80.952	ENSTRUG00000022058	-	100	80.952	Takifugu_rubripes
ENSGAFG00000001732	-	71	67.816	ENSUAMG00000008403	-	71	66.304	Ursus_americanus
ENSGAFG00000001732	-	66	90.123	ENSUAMG00000022662	-	79	86.047	Ursus_americanus
ENSGAFG00000001732	-	95	73.276	ENSVVUG00000005888	-	85	87.059	Vulpes_vulpes
ENSGAFG00000001732	-	98	99.167	ENSXCOG00000017792	-	94	99.167	Xiphophorus_couchianus
ENSGAFG00000001732	-	70	67.059	ENSXCOG00000003220	-	73	67.059	Xiphophorus_couchianus
ENSGAFG00000001732	-	68	67.470	ENSXCOG00000015127	-	89	67.470	Xiphophorus_couchianus
ENSGAFG00000001732	-	67	68.293	ENSXMAG00000019180	SRSF11	54	69.136	Xiphophorus_maculatus
ENSGAFG00000001732	-	100	99.180	ENSXMAG00000028210	-	100	99.180	Xiphophorus_maculatus