EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001759 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6128 bases
Position: chrNHOQ01001237.1:25121-31248
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002951	YTH	PF04146.15	3.8e-41	1	1
ENSGAFP00000002986	YTH	PF04146.15	4.5e-41	1	1
ENSGAFP00000002899	YTH	PF04146.15	4.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003021	-	1491	-	ENSGAFP00000002986	496 (aa)	-	-
ENSGAFT00000002986	-	1368	-	ENSGAFP00000002951	456 (aa)	-	-
ENSGAFT00000002934	-	1515	-	ENSGAFP00000002899	504 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001759's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001759	ythdc1	54	67.391	ENSG00000083896	YTHDC1	51	66.548	Homo_sapiens
ENSGAFG00000001759	ythdc1	54	67.391	ENSAMEG00000005688	YTHDC1	55	64.194	Ailuropoda_melanoleuca
ENSGAFG00000001759	ythdc1	91	79.572	ENSACIG00000019728	ythdc1	72	81.206	Amphilophus_citrinellus
ENSGAFG00000001759	ythdc1	54	67.391	ENSANAG00000001522	YTHDC1	51	65.233	Aotus_nancymaae
ENSGAFG00000001759	ythdc1	54	67.391	ENSCJAG00000009934	YTHDC1	51	65.233	Callithrix_jacchus
ENSGAFG00000001759	ythdc1	54	67.391	ENSCAFG00000002821	YTHDC1	55	64.194	Canis_familiaris
ENSGAFG00000001759	ythdc1	54	67.391	ENSCAFG00020027112	YTHDC1	55	64.194	Canis_lupus_dingo
ENSGAFG00000001759	ythdc1	63	61.017	ENSCHIG00000004810	YTHDC1	67	65.693	Capra_hircus
ENSGAFG00000001759	ythdc1	54	67.391	ENSTSYG00000011668	YTHDC1	51	65.233	Carlito_syrichta
ENSGAFG00000001759	ythdc1	54	67.391	ENSCCAG00000035754	YTHDC1	51	65.233	Cebus_capucinus
ENSGAFG00000001759	ythdc1	54	67.391	ENSCATG00000036320	YTHDC1	70	65.052	Cercocebus_atys
ENSGAFG00000001759	ythdc1	54	67.391	ENSCSAG00000005252	YTHDC1	51	65.233	Chlorocebus_sabaeus
ENSGAFG00000001759	ythdc1	54	67.391	ENSCANG00000004769	YTHDC1	70	65.052	Colobus_angolensis_palliatus
ENSGAFG00000001759	ythdc1	54	67.029	ENSCGRG00001000816	Ythdc1	50	65.637	Cricetulus_griseus_chok1gshd
ENSGAFG00000001759	ythdc1	54	67.029	ENSCGRG00000009807	Ythdc1	51	64.875	Cricetulus_griseus_crigri
ENSGAFG00000001759	ythdc1	51	88.412	ENSCSEG00000020404	ythdc1	71	66.667	Cynoglossus_semilaevis
ENSGAFG00000001759	ythdc1	54	91.093	ENSCVAG00000022349	ythdc1	70	69.854	Cyprinodon_variegatus
ENSGAFG00000001759	ythdc1	69	66.431	ENSEASG00005018383	YTHDC1	73	46.765	Equus_asinus_asinus
ENSGAFG00000001759	ythdc1	72	67.658	ENSECAG00000018303	YTHDC1	73	64.918	Equus_caballus
ENSGAFG00000001759	ythdc1	80	67.029	ENSEEUG00000015466	YTHDC1	53	66.058	Erinaceus_europaeus
ENSGAFG00000001759	ythdc1	69	67.176	ENSFCAG00000026791	YTHDC1	50	66.788	Felis_catus
ENSGAFG00000001759	ythdc1	70	64.029	ENSFALG00000006581	YTHDC1	51	78.155	Ficedula_albicollis
ENSGAFG00000001759	ythdc1	95	66.452	ENSFHEG00000001286	ythdc1	73	62.979	Fundulus_heteroclitus
ENSGAFG00000001759	ythdc1	68	80.357	ENSGMOG00000018815	ythdc1	64	80.357	Gadus_morhua
ENSGAFG00000001759	ythdc1	54	67.391	ENSGGOG00000021958	YTHDC1	70	65.052	Gorilla_gorilla
ENSGAFG00000001759	ythdc1	55	87.368	ENSHCOG00000001520	ythdc1	57	87.368	Hippocampus_comes
ENSGAFG00000001759	ythdc1	72	67.176	ENSSTOG00000013652	YTHDC1	50	66.548	Ictidomys_tridecemlineatus
ENSGAFG00000001759	ythdc1	50	90.476	ENSKMAG00000006483	ythdc1	52	90.323	Kryptolebias_marmoratus
ENSGAFG00000001759	ythdc1	59	91.429	ENSLBEG00000020831	ythdc1	51	91.429	Labrus_bergylta
ENSGAFG00000001759	ythdc1	91	54.989	ENSLOCG00000003045	ythdc1	69	54.681	Lepisosteus_oculatus
ENSGAFG00000001759	ythdc1	94	52.043	ENSLAFG00000021592	YTHDC1	85	52.431	Loxodonta_africana
ENSGAFG00000001759	ythdc1	54	67.391	ENSMFAG00000031927	YTHDC1	70	65.052	Macaca_fascicularis
ENSGAFG00000001759	ythdc1	54	67.391	ENSMMUG00000002265	YTHDC1	67	65.799	Macaca_mulatta
ENSGAFG00000001759	ythdc1	54	67.391	ENSMNEG00000033751	YTHDC1	70	65.052	Macaca_nemestrina
ENSGAFG00000001759	ythdc1	54	67.391	ENSMLEG00000042147	YTHDC1	70	65.052	Mandrillus_leucophaeus
ENSGAFG00000001759	ythdc1	54	67.029	ENSMAUG00000001286	Ythdc1	50	64.875	Mesocricetus_auratus
ENSGAFG00000001759	ythdc1	56	67.133	ENSMICG00000034640	YTHDC1	50	66.788	Microcebus_murinus
ENSGAFG00000001759	ythdc1	52	80.315	ENSMMOG00000021200	ythdc1	76	70.021	Mola_mola
ENSGAFG00000001759	ythdc1	54	91.093	ENSMALG00000013412	ythdc1	78	71.762	Monopterus_albus
ENSGAFG00000001759	ythdc1	56	66.084	ENSMUSG00000035851	Ythdc1	68	64.662	Mus_musculus
ENSGAFG00000001759	ythdc1	61	69.399	ENSNGAG00000024000	Ythdc1	58	68.208	Nannospalax_galili
ENSGAFG00000001759	ythdc1	82	70.984	ENSNBRG00000007663	ythdc1	67	75.510	Neolamprologus_brichardi
ENSGAFG00000001759	ythdc1	54	66.304	ENSNLEG00000009202	YTHDC1	67	64.964	Nomascus_leucogenys
ENSGAFG00000001759	ythdc1	91	94.118	ENSONIG00000012651	ythdc1	68	91.667	Oreochromis_niloticus
ENSGAFG00000001759	ythdc1	94	77.273	ENSOCUG00000015886	YTHDC1	51	78.155	Oryctolagus_cuniculus
ENSGAFG00000001759	ythdc1	51	84.519	ENSOMEG00000000551	ythdc1	71	68.723	Oryzias_melastigma
ENSGAFG00000001759	ythdc1	54	68.116	ENSOGAG00000003362	YTHDC1	50	66.788	Otolemur_garnettii
ENSGAFG00000001759	ythdc1	54	67.391	ENSPPAG00000041315	YTHDC1	70	65.052	Pan_paniscus
ENSGAFG00000001759	ythdc1	54	67.391	ENSPPRG00000011979	YTHDC1	50	65.950	Panthera_pardus
ENSGAFG00000001759	ythdc1	50	67.969	ENSPTIG00000015527	YTHDC1	50	66.058	Panthera_tigris_altaica
ENSGAFG00000001759	ythdc1	54	67.391	ENSPTRG00000016105	YTHDC1	70	65.052	Pan_troglodytes
ENSGAFG00000001759	ythdc1	54	67.391	ENSPANG00000021590	YTHDC1	69	65.052	Papio_anubis
ENSGAFG00000001759	ythdc1	94	56.818	ENSPKIG00000018497	ythdc1	70	56.198	Paramormyrops_kingsleyae
ENSGAFG00000001759	ythdc1	65	79.835	ENSPMGG00000000970	-	62	81.702	Periophthalmus_magnuspinnatus
ENSGAFG00000001759	ythdc1	54	67.029	ENSPEMG00000013850	Ythdc1	51	64.875	Peromyscus_maniculatus_bairdii
ENSGAFG00000001759	ythdc1	55	99.197	ENSPFOG00000013404	ythdc1	69	83.333	Poecilia_formosa
ENSGAFG00000001759	ythdc1	60	99.267	ENSPLAG00000011079	ythdc1	58	99.267	Poecilia_latipinna
ENSGAFG00000001759	ythdc1	55	99.197	ENSPMEG00000009238	ythdc1	69	83.772	Poecilia_mexicana
ENSGAFG00000001759	ythdc1	55	99.197	ENSPREG00000016973	ythdc1	76	83.406	Poecilia_reticulata
ENSGAFG00000001759	ythdc1	62	64.815	ENSPVAG00000015551	YTHDC1	50	61.679	Pteropus_vampyrus
ENSGAFG00000001759	ythdc1	72	66.078	ENSRNOG00000001996	Ythdc1	59	65.693	Rattus_norvegicus
ENSGAFG00000001759	ythdc1	56	66.436	ENSRBIG00000028279	YTHDC1	67	66.544	Rhinopithecus_bieti
ENSGAFG00000001759	ythdc1	54	67.391	ENSRROG00000035028	YTHDC1	70	65.052	Rhinopithecus_roxellana
ENSGAFG00000001759	ythdc1	54	67.391	ENSSBOG00000022353	YTHDC1	67	66.058	Saimiri_boliviensis_boliviensis
ENSGAFG00000001759	ythdc1	54	66.667	ENSSARG00000010960	YTHDC1	53	63.548	Sorex_araneus
ENSGAFG00000001759	ythdc1	64	82.051	ENSTRUG00000010142	ythdc1	50	82.051	Takifugu_rubripes
ENSGAFG00000001759	ythdc1	94	71.363	ENSTNIG00000013243	ythdc1	68	70.670	Tetraodon_nigroviridis
ENSGAFG00000001759	ythdc1	56	55.088	ENSUMAG00000013668	YTHDC1	69	46.281	Ursus_maritimus
ENSGAFG00000001759	ythdc1	71	65.314	ENSVPAG00000009040	YTHDC1	50	66.023	Vicugna_pacos
ENSGAFG00000001759	ythdc1	53	67.138	ENSVVUG00000005387	YTHDC1	61	58.754	Vulpes_vulpes
ENSGAFG00000001759	ythdc1	79	90.816	ENSXCOG00000000530	ythdc1	90	86.667	Xiphophorus_couchianus
ENSGAFG00000001759	ythdc1	55	98.795	ENSXMAG00000005196	ythdc1	70	85.161	Xiphophorus_maculatus