EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001776 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4461 bases
Position: chrNHOQ01001485.1:5091-9551
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002585	RNase_H	PF00075.24	2.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002614	-	2089	-	ENSGAFP00000002585	295 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001776	rnaseh1	90	54.682	ENSG00000171865	RNASEH1	90	54.682	Homo_sapiens
ENSGAFG00000001776	rnaseh1	99	70.548	ENSAPOG00000000412	rnaseh1	97	70.548	Acanthochromis_polyacanthus
ENSGAFG00000001776	rnaseh1	90	54.478	ENSAMEG00000018433	RNASEH1	89	54.887	Ailuropoda_melanoleuca
ENSGAFG00000001776	rnaseh1	99	72.603	ENSACIG00000014666	rnaseh1	96	72.603	Amphilophus_citrinellus
ENSGAFG00000001776	rnaseh1	99	71.918	ENSAOCG00000015210	rnaseh1	97	71.918	Amphiprion_ocellaris
ENSGAFG00000001776	rnaseh1	99	72.014	ENSAPEG00000014104	rnaseh1	97	72.014	Amphiprion_percula
ENSGAFG00000001776	rnaseh1	99	71.575	ENSATEG00000000598	rnaseh1	95	75.373	Anabas_testudineus
ENSGAFG00000001776	rnaseh1	86	54.651	ENSAPLG00000001961	RNASEH1	100	54.651	Anas_platyrhynchos
ENSGAFG00000001776	rnaseh1	91	49.667	ENSACAG00000016857	rnaseh1	93	49.667	Anolis_carolinensis
ENSGAFG00000001776	rnaseh1	90	54.511	ENSANAG00000024055	RNASEH1	90	54.511	Aotus_nancymaae
ENSGAFG00000001776	rnaseh1	99	72.391	ENSACLG00000006741	rnaseh1	96	72.333	Astatotilapia_calliptera
ENSGAFG00000001776	rnaseh1	99	51.027	ENSAMXG00000042940	rnaseh1	97	54.152	Astyanax_mexicanus
ENSGAFG00000001776	rnaseh1	91	57.249	ENSBTAG00000016235	RNASEH1	92	56.727	Bos_taurus
ENSGAFG00000001776	rnaseh1	89	35.741	WBGene00004382	rnh-1.0	95	35.741	Caenorhabditis_elegans
ENSGAFG00000001776	rnaseh1	90	54.044	ENSCJAG00000035450	RNASEH1	90	54.044	Callithrix_jacchus
ENSGAFG00000001776	rnaseh1	98	51.020	ENSCAFG00000003259	RNASEH1	98	51.020	Canis_familiaris
ENSGAFG00000001776	rnaseh1	51	65.563	ENSCAFG00020004994	RNASEH1	97	65.563	Canis_lupus_dingo
ENSGAFG00000001776	rnaseh1	91	57.249	ENSCHIG00000022264	-	90	57.249	Capra_hircus
ENSGAFG00000001776	rnaseh1	83	46.154	ENSCHIG00000022230	-	99	46.154	Capra_hircus
ENSGAFG00000001776	rnaseh1	90	53.506	ENSTSYG00000012926	RNASEH1	89	53.506	Carlito_syrichta
ENSGAFG00000001776	rnaseh1	84	55.600	ENSCAPG00000004813	RNASEH1	98	55.600	Cavia_aperea
ENSGAFG00000001776	rnaseh1	91	55.224	ENSCPOG00000022278	Rnaseh1	87	55.224	Cavia_porcellus
ENSGAFG00000001776	rnaseh1	89	55.556	ENSCCAG00000038017	RNASEH1	89	55.556	Cebus_capucinus
ENSGAFG00000001776	rnaseh1	90	48.679	ENSCATG00000016818	-	89	48.679	Cercocebus_atys
ENSGAFG00000001776	rnaseh1	90	53.558	ENSCATG00000016515	-	90	53.558	Cercocebus_atys
ENSGAFG00000001776	rnaseh1	89	55.263	ENSCLAG00000002440	RNASEH1	89	55.263	Chinchilla_lanigera
ENSGAFG00000001776	rnaseh1	90	54.104	ENSCSAG00000006943	RNASEH1	90	54.104	Chlorocebus_sabaeus
ENSGAFG00000001776	rnaseh1	56	65.060	ENSCHOG00000008547	RNASEH1	81	65.060	Choloepus_hoffmanni
ENSGAFG00000001776	rnaseh1	90	55.474	ENSCPBG00000021620	RNASEH1	99	55.474	Chrysemys_picta_bellii
ENSGAFG00000001776	rnaseh1	98	37.000	ENSCING00000014054	-	99	37.000	Ciona_intestinalis
ENSGAFG00000001776	rnaseh1	76	38.197	ENSCSAVG00000000009	-	96	38.197	Ciona_savignyi
ENSGAFG00000001776	rnaseh1	90	54.478	ENSCANG00000037763	RNASEH1	90	54.478	Colobus_angolensis_palliatus
ENSGAFG00000001776	rnaseh1	90	54.613	ENSCGRG00001008950	Rnaseh1	90	55.185	Cricetulus_griseus_chok1gshd
ENSGAFG00000001776	rnaseh1	90	54.613	ENSCGRG00000006029	Rnaseh1	90	55.185	Cricetulus_griseus_crigri
ENSGAFG00000001776	rnaseh1	99	63.333	ENSCSEG00000005741	rnaseh1	95	66.787	Cynoglossus_semilaevis
ENSGAFG00000001776	rnaseh1	99	80.822	ENSCVAG00000018717	rnaseh1	97	80.822	Cyprinodon_variegatus
ENSGAFG00000001776	rnaseh1	91	66.058	ENSDARG00000042571	rnaseh1	98	66.058	Danio_rerio
ENSGAFG00000001776	rnaseh1	90	53.585	ENSDNOG00000016056	RNASEH1	90	53.585	Dasypus_novemcinctus
ENSGAFG00000001776	rnaseh1	90	53.333	ENSDORG00000000704	Rnaseh1	90	53.333	Dipodomys_ordii
ENSGAFG00000001776	rnaseh1	89	39.655	FBgn0023171	rnh1	92	39.655	Drosophila_melanogaster
ENSGAFG00000001776	rnaseh1	90	51.128	ENSETEG00000012674	RNASEH1	89	51.128	Echinops_telfairi
ENSGAFG00000001776	rnaseh1	90	43.189	ENSEBUG00000008898	rnaseh1	98	43.189	Eptatretus_burgeri
ENSGAFG00000001776	rnaseh1	89	46.241	ENSEBUG00000006116	rnaseh1	78	46.241	Eptatretus_burgeri
ENSGAFG00000001776	rnaseh1	90	55.185	ENSEASG00005022200	RNASEH1	88	55.185	Equus_asinus_asinus
ENSGAFG00000001776	rnaseh1	90	55.185	ENSECAG00000020695	RNASEH1	88	55.185	Equus_caballus
ENSGAFG00000001776	rnaseh1	99	65.116	ENSELUG00000010112	rnaseh1	99	65.116	Esox_lucius
ENSGAFG00000001776	rnaseh1	98	51.203	ENSFCAG00000025832	RNASEH1	98	51.203	Felis_catus
ENSGAFG00000001776	rnaseh1	91	55.235	ENSFALG00000002069	RNASEH1	93	55.235	Ficedula_albicollis
ENSGAFG00000001776	rnaseh1	89	53.759	ENSFDAG00000002035	RNASEH1	79	53.759	Fukomys_damarensis
ENSGAFG00000001776	rnaseh1	99	64.746	ENSGMOG00000013818	rnaseh1	99	64.746	Gadus_morhua
ENSGAFG00000001776	rnaseh1	96	54.138	ENSGALG00000016389	RNASEH1	99	54.138	Gallus_gallus
ENSGAFG00000001776	rnaseh1	99	69.932	ENSGACG00000011935	rnaseh1	99	69.932	Gasterosteus_aculeatus
ENSGAFG00000001776	rnaseh1	99	52.244	ENSGAGG00000009150	RNASEH1	70	52.885	Gopherus_agassizii
ENSGAFG00000001776	rnaseh1	90	54.511	ENSGGOG00000034822	RNASEH1	90	54.511	Gorilla_gorilla
ENSGAFG00000001776	rnaseh1	100	72.000	ENSHBUG00000004666	rnaseh1	96	72.000	Haplochromis_burtoni
ENSGAFG00000001776	rnaseh1	89	54.924	ENSHGLG00000002585	Rnaseh1	82	54.924	Heterocephalus_glaber_female
ENSGAFG00000001776	rnaseh1	89	54.924	ENSHGLG00100005105	Rnaseh1	82	54.924	Heterocephalus_glaber_male
ENSGAFG00000001776	rnaseh1	99	63.123	ENSHCOG00000012329	rnaseh1	97	64.120	Hippocampus_comes
ENSGAFG00000001776	rnaseh1	100	58.389	ENSIPUG00000023060	rnaseh1	99	61.679	Ictalurus_punctatus
ENSGAFG00000001776	rnaseh1	89	55.970	ENSSTOG00000012774	RNASEH1	91	55.970	Ictidomys_tridecemlineatus
ENSGAFG00000001776	rnaseh1	88	44.231	ENSJJAG00000008994	-	89	44.231	Jaculus_jaculus
ENSGAFG00000001776	rnaseh1	90	50.752	ENSJJAG00000021481	-	89	50.752	Jaculus_jaculus
ENSGAFG00000001776	rnaseh1	81	52.697	ENSJJAG00000020238	Rnaseh1	90	52.697	Jaculus_jaculus
ENSGAFG00000001776	rnaseh1	97	74.035	ENSKMAG00000001373	rnaseh1	95	74.035	Kryptolebias_marmoratus
ENSGAFG00000001776	rnaseh1	99	65.753	ENSLBEG00000004480	rnaseh1	97	71.004	Labrus_bergylta
ENSGAFG00000001776	rnaseh1	92	56.071	ENSLACG00000007100	RNASEH1	90	56.071	Latimeria_chalumnae
ENSGAFG00000001776	rnaseh1	92	58.156	ENSLOCG00000017212	rnaseh1	99	58.511	Lepisosteus_oculatus
ENSGAFG00000001776	rnaseh1	89	57.407	ENSLAFG00000015091	RNASEH1	89	57.407	Loxodonta_africana
ENSGAFG00000001776	rnaseh1	90	54.478	ENSMFAG00000000063	-	90	54.478	Macaca_fascicularis
ENSGAFG00000001776	rnaseh1	92	47.887	ENSMFAG00000002323	-	91	47.887	Macaca_fascicularis
ENSGAFG00000001776	rnaseh1	92	49.632	ENSMMUG00000019280	-	91	49.632	Macaca_mulatta
ENSGAFG00000001776	rnaseh1	92	48.239	ENSMNEG00000029676	-	91	48.239	Macaca_nemestrina
ENSGAFG00000001776	rnaseh1	90	54.851	ENSMNEG00000040183	-	90	54.851	Macaca_nemestrina
ENSGAFG00000001776	rnaseh1	84	54.400	ENSMLEG00000039352	-	98	54.400	Mandrillus_leucophaeus
ENSGAFG00000001776	rnaseh1	92	49.648	ENSMLEG00000028662	-	91	49.648	Mandrillus_leucophaeus
ENSGAFG00000001776	rnaseh1	100	67.905	ENSMAMG00000019725	rnaseh1	95	71.324	Mastacembelus_armatus
ENSGAFG00000001776	rnaseh1	99	72.391	ENSMZEG00005013006	rnaseh1	96	72.333	Maylandia_zebra
ENSGAFG00000001776	rnaseh1	81	54.618	ENSMGAG00000013979	RNASEH1	100	54.618	Meleagris_gallopavo
ENSGAFG00000001776	rnaseh1	90	56.458	ENSMAUG00000014957	Rnaseh1	90	56.458	Mesocricetus_auratus
ENSGAFG00000001776	rnaseh1	89	55.597	ENSMICG00000033156	RNASEH1	88	55.597	Microcebus_murinus
ENSGAFG00000001776	rnaseh1	90	55.849	ENSMOCG00000015522	Rnaseh1	90	55.849	Microtus_ochrogaster
ENSGAFG00000001776	rnaseh1	100	69.492	ENSMMOG00000015902	rnaseh1	97	69.492	Mola_mola
ENSGAFG00000001776	rnaseh1	99	52.203	ENSMODG00000014491	-	98	52.203	Monodelphis_domestica
ENSGAFG00000001776	rnaseh1	79	48.945	ENSMODG00000028814	-	91	51.261	Monodelphis_domestica
ENSGAFG00000001776	rnaseh1	99	69.521	ENSMALG00000010565	rnaseh1	95	69.521	Monopterus_albus
ENSGAFG00000001776	rnaseh1	90	55.720	MGP_CAROLIEiJ_G0017660	Rnaseh1	90	55.720	Mus_caroli
ENSGAFG00000001776	rnaseh1	90	56.089	ENSMUSG00000020630	Rnaseh1	90	56.089	Mus_musculus
ENSGAFG00000001776	rnaseh1	89	54.444	MGP_PahariEiJ_G0029418	Rnaseh1	90	56.296	Mus_pahari
ENSGAFG00000001776	rnaseh1	90	55.263	MGP_SPRETEiJ_G0018502	Rnaseh1	90	55.263	Mus_spretus
ENSGAFG00000001776	rnaseh1	51	65.563	ENSMPUG00000012984	RNASEH1	73	65.563	Mustela_putorius_furo
ENSGAFG00000001776	rnaseh1	90	54.647	ENSNGAG00000015966	Rnaseh1	85	54.647	Nannospalax_galili
ENSGAFG00000001776	rnaseh1	99	71.717	ENSNBRG00000008739	rnaseh1	96	71.667	Neolamprologus_brichardi
ENSGAFG00000001776	rnaseh1	82	47.131	ENSNLEG00000000059	-	88	47.131	Nomascus_leucogenys
ENSGAFG00000001776	rnaseh1	90	48.134	ENSNLEG00000015400	RNASEH1	88	48.134	Nomascus_leucogenys
ENSGAFG00000001776	rnaseh1	99	35.154	ENSMEUG00000003610	-	99	35.154	Notamacropus_eugenii
ENSGAFG00000001776	rnaseh1	91	59.176	ENSOPRG00000005072	RNASEH1	90	59.176	Ochotona_princeps
ENSGAFG00000001776	rnaseh1	89	56.654	ENSODEG00000000235	Rnaseh1	86	56.654	Octodon_degus
ENSGAFG00000001776	rnaseh1	91	75.458	ENSONIG00000018697	rnaseh1	98	75.458	Oreochromis_niloticus
ENSGAFG00000001776	rnaseh1	90	55.970	ENSOCUG00000006117	RNASEH1	90	55.970	Oryctolagus_cuniculus
ENSGAFG00000001776	rnaseh1	91	73.333	ENSORLG00000018127	rnaseh1	96	73.333	Oryzias_latipes
ENSGAFG00000001776	rnaseh1	99	69.283	ENSORLG00020013660	rnaseh1	97	69.283	Oryzias_latipes_hni
ENSGAFG00000001776	rnaseh1	99	69.283	ENSORLG00015011338	rnaseh1	97	69.283	Oryzias_latipes_hsok
ENSGAFG00000001776	rnaseh1	91	68.889	ENSOMEG00000004710	rnaseh1	99	68.889	Oryzias_melastigma
ENSGAFG00000001776	rnaseh1	89	55.351	ENSOGAG00000017176	RNASEH1	89	55.351	Otolemur_garnettii
ENSGAFG00000001776	rnaseh1	93	48.084	ENSOARG00000005386	RNASEH1	93	48.084	Ovis_aries
ENSGAFG00000001776	rnaseh1	90	54.682	ENSPPAG00000034221	RNASEH1	90	54.682	Pan_paniscus
ENSGAFG00000001776	rnaseh1	99	50.853	ENSPPRG00000015513	RNASEH1	99	50.853	Panthera_pardus
ENSGAFG00000001776	rnaseh1	84	54.435	ENSPTIG00000019034	RNASEH1	83	54.435	Panthera_tigris_altaica
ENSGAFG00000001776	rnaseh1	90	54.682	ENSPTRG00000011614	RNASEH1	90	54.682	Pan_troglodytes
ENSGAFG00000001776	rnaseh1	83	47.809	ENSPTRG00000043403	-	91	47.809	Pan_troglodytes
ENSGAFG00000001776	rnaseh1	90	47.670	ENSPANG00000018246	-	89	47.670	Papio_anubis
ENSGAFG00000001776	rnaseh1	90	53.731	ENSPANG00000000443	RNASEH1	98	53.571	Papio_anubis
ENSGAFG00000001776	rnaseh1	92	58.696	ENSPKIG00000003146	rnaseh1	99	59.420	Paramormyrops_kingsleyae
ENSGAFG00000001776	rnaseh1	90	54.044	ENSPSIG00000002937	RNASEH1	99	54.044	Pelodiscus_sinensis
ENSGAFG00000001776	rnaseh1	98	63.230	ENSPMGG00000017463	rnaseh1	98	63.230	Periophthalmus_magnuspinnatus
ENSGAFG00000001776	rnaseh1	90	55.056	ENSPEMG00000022465	-	90	56.716	Peromyscus_maniculatus_bairdii
ENSGAFG00000001776	rnaseh1	99	49.664	ENSPCIG00000023334	-	98	49.664	Phascolarctos_cinereus
ENSGAFG00000001776	rnaseh1	51	34.868	ENSPCIG00000026047	-	85	34.868	Phascolarctos_cinereus
ENSGAFG00000001776	rnaseh1	99	92.517	ENSPFOG00000002841	rnaseh1	99	92.517	Poecilia_formosa
ENSGAFG00000001776	rnaseh1	75	75.225	ENSPLAG00000021349	-	85	75.225	Poecilia_latipinna
ENSGAFG00000001776	rnaseh1	99	92.857	ENSPMEG00000016826	rnaseh1	99	92.857	Poecilia_mexicana
ENSGAFG00000001776	rnaseh1	99	91.667	ENSPREG00000012197	rnaseh1	99	91.667	Poecilia_reticulata
ENSGAFG00000001776	rnaseh1	82	50.813	ENSPPYG00000008067	-	90	50.813	Pongo_abelii
ENSGAFG00000001776	rnaseh1	90	44.403	ENSPPYG00000025873	RNASEH1	88	44.403	Pongo_abelii
ENSGAFG00000001776	rnaseh1	91	55.109	ENSPCAG00000002500	RNASEH1	90	55.109	Procavia_capensis
ENSGAFG00000001776	rnaseh1	90	49.630	ENSPCOG00000019444	RNASEH1	89	49.630	Propithecus_coquereli
ENSGAFG00000001776	rnaseh1	91	53.285	ENSPVAG00000002070	RNASEH1	90	53.285	Pteropus_vampyrus
ENSGAFG00000001776	rnaseh1	99	72.054	ENSPNYG00000001292	rnaseh1	96	72.000	Pundamilia_nyererei
ENSGAFG00000001776	rnaseh1	99	60.333	ENSPNAG00000022344	rnaseh1	99	60.333	Pygocentrus_nattereri
ENSGAFG00000001776	rnaseh1	89	56.654	ENSRNOG00000008584	Rnaseh1	90	57.358	Rattus_norvegicus
ENSGAFG00000001776	rnaseh1	90	54.478	ENSRBIG00000034222	RNASEH1	89	54.478	Rhinopithecus_bieti
ENSGAFG00000001776	rnaseh1	90	54.478	ENSRROG00000041761	RNASEH1	89	54.478	Rhinopithecus_roxellana
ENSGAFG00000001776	rnaseh1	90	40.323	YMR234W	-	90	40.323	Saccharomyces_cerevisiae
ENSGAFG00000001776	rnaseh1	89	55.926	ENSSBOG00000025411	RNASEH1	89	55.926	Saimiri_boliviensis_boliviensis
ENSGAFG00000001776	rnaseh1	90	56.296	ENSSHAG00000013051	RNASEH1	88	56.296	Sarcophilus_harrisii
ENSGAFG00000001776	rnaseh1	99	60.000	ENSSFOG00015002709	rnaseh1	99	60.000	Scleropages_formosus
ENSGAFG00000001776	rnaseh1	99	68.836	ENSSMAG00000007586	rnaseh1	96	68.836	Scophthalmus_maximus
ENSGAFG00000001776	rnaseh1	96	72.085	ENSSDUG00000008217	rnaseh1	94	74.157	Seriola_dumerili
ENSGAFG00000001776	rnaseh1	89	69.847	ENSSLDG00000000442	rnaseh1	95	72.112	Seriola_lalandi_dorsalis
ENSGAFG00000001776	rnaseh1	91	55.019	ENSSPUG00000006644	RNASEH1	93	55.019	Sphenodon_punctatus
ENSGAFG00000001776	rnaseh1	99	72.945	ENSSPAG00000009353	rnaseh1	96	72.945	Stegastes_partitus
ENSGAFG00000001776	rnaseh1	91	57.194	ENSSSCG00000025305	RNASEH1	90	57.194	Sus_scrofa
ENSGAFG00000001776	rnaseh1	96	53.559	ENSTGUG00000012980	RNASEH1	93	55.477	Taeniopygia_guttata
ENSGAFG00000001776	rnaseh1	95	70.819	ENSTRUG00000015774	rnaseh1	96	72.119	Takifugu_rubripes
ENSGAFG00000001776	rnaseh1	91	72.862	ENSTNIG00000010715	rnaseh1	96	72.862	Tetraodon_nigroviridis
ENSGAFG00000001776	rnaseh1	91	54.412	ENSTTRG00000001615	RNASEH1	90	54.412	Tursiops_truncatus
ENSGAFG00000001776	rnaseh1	50	65.986	ENSUAMG00000018254	RNASEH1	76	65.986	Ursus_americanus
ENSGAFG00000001776	rnaseh1	69	51.429	ENSUMAG00000003941	RNASEH1	65	51.429	Ursus_maritimus
ENSGAFG00000001776	rnaseh1	91	48.708	ENSVPAG00000011589	RNASEH1	90	48.708	Vicugna_pacos
ENSGAFG00000001776	rnaseh1	98	51.361	ENSVVUG00000008633	RNASEH1	88	51.361	Vulpes_vulpes
ENSGAFG00000001776	rnaseh1	95	54.514	ENSXETG00000001212	rnaseh1	97	53.979	Xenopus_tropicalis
ENSGAFG00000001776	rnaseh1	89	39.163	ENSXETG00000030371	-	99	39.163	Xenopus_tropicalis
ENSGAFG00000001776	rnaseh1	100	92.542	ENSXMAG00000002357	rnaseh1	100	92.542	Xiphophorus_maculatus