EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000001814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 10697 bases
Position: chrNHOQ01000396.1:14930-25626
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002665	PARP	PF00644.20	6.6e-21	1	1
ENSGAFP00000002647	PARP	PF00644.20	5.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002678	-	5929	-	ENSGAFP00000002647	1593 (aa)	-	UPI000DD190FE
ENSGAFT00000002696	-	1122	-	ENSGAFP00000002665	373 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000001814	-	55	71.078	ENSGAFG00000001802	-	100	61.679
ENSGAFG00000001814	-	53	31.944	ENSGAFG00000008847	PARP11	66	33.641
ENSGAFG00000001814	-	54	30.144	ENSGAFG00000008840	PARP11	69	30.144
ENSGAFG00000001814	-	92	46.429	ENSGAFG00000009879	si:ch211-219a4.3	99	32.394
ENSGAFG00000001814	-	66	31.102	ENSGAFG00000008834	parp11	79	31.102
ENSGAFG00000001814	-	52	48.969	ENSGAFG00000015867	-	100	39.781
ENSGAFG00000001814	-	85	38.318	ENSGAFG00000002533	-	97	46.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001814	-	86	34.259	ENSAPOG00000007412	-	96	49.359	Acanthochromis_polyacanthus
ENSGAFG00000001814	-	92	69.275	ENSAPOG00000021642	-	100	78.680	Acanthochromis_polyacanthus
ENSGAFG00000001814	-	86	39.319	ENSACIG00000009912	-	99	48.744	Amphilophus_citrinellus
ENSGAFG00000001814	-	52	75.648	ENSACIG00000020176	-	99	66.058	Amphilophus_citrinellus
ENSGAFG00000001814	-	52	49.246	ENSACIG00000009927	-	97	49.246	Amphilophus_citrinellus
ENSGAFG00000001814	-	92	45.960	ENSACIG00000003944	si:ch211-219a4.3	86	45.960	Amphilophus_citrinellus
ENSGAFG00000001814	-	86	38.369	ENSAOCG00000002980	-	98	49.735	Amphiprion_ocellaris
ENSGAFG00000001814	-	92	68.841	ENSAOCG00000017389	-	91	79.695	Amphiprion_ocellaris
ENSGAFG00000001814	-	85	44.949	ENSAPEG00000003728	-	99	33.553	Amphiprion_percula
ENSGAFG00000001814	-	54	47.783	ENSAPEG00000003700	-	93	35.188	Amphiprion_percula
ENSGAFG00000001814	-	92	79.592	ENSAPEG00000001687	-	100	79.897	Amphiprion_percula
ENSGAFG00000001814	-	94	78.571	ENSATEG00000011611	-	99	57.143	Anabas_testudineus
ENSGAFG00000001814	-	86	49.254	ENSATEG00000002598	-	97	33.987	Anabas_testudineus
ENSGAFG00000001814	-	52	50.251	ENSATEG00000002592	-	94	33.926	Anabas_testudineus
ENSGAFG00000001814	-	84	49.254	ENSATEG00000002587	-	99	34.783	Anabas_testudineus
ENSGAFG00000001814	-	58	45.161	ENSACAG00000009741	-	99	33.267	Anolis_carolinensis
ENSGAFG00000001814	-	51	43.878	ENSACLG00000013170	-	90	43.878	Astatotilapia_calliptera
ENSGAFG00000001814	-	92	73.913	ENSACLG00000001129	-	99	74.576	Astatotilapia_calliptera
ENSGAFG00000001814	-	86	44.954	ENSACLG00000013116	-	99	33.013	Astatotilapia_calliptera
ENSGAFG00000001814	-	83	37.037	ENSACLG00000013093	-	98	45.729	Astatotilapia_calliptera
ENSGAFG00000001814	-	84	44.103	ENSACLG00000005418	-	99	44.103	Astatotilapia_calliptera
ENSGAFG00000001814	-	52	49.746	ENSACLG00000013204	-	88	30.986	Astatotilapia_calliptera
ENSGAFG00000001814	-	92	47.208	ENSAMXG00000031852	-	100	31.020	Astyanax_mexicanus
ENSGAFG00000001814	-	93	36.911	ENSAMXG00000035876	si:cabz01030277.1	99	36.649	Astyanax_mexicanus
ENSGAFG00000001814	-	100	38.863	ENSAMXG00000043329	-	53	38.863	Astyanax_mexicanus
ENSGAFG00000001814	-	86	50.000	ENSBTAG00000016656	PARP14	84	50.251	Bos_taurus
ENSGAFG00000001814	-	87	50.505	ENSCJAG00000007930	PARP14	64	30.731	Callithrix_jacchus
ENSGAFG00000001814	-	87	52.525	ENSCCAG00000028961	PARP14	64	30.966	Cebus_capucinus
ENSGAFG00000001814	-	87	52.525	ENSCATG00000033839	PARP14	72	30.045	Cercocebus_atys
ENSGAFG00000001814	-	75	53.595	ENSCHOG00000010569	PARP14	54	40.909	Choloepus_hoffmanni
ENSGAFG00000001814	-	90	44.388	ENSCSEG00000017936	si:ch211-219a4.3	98	32.253	Cynoglossus_semilaevis
ENSGAFG00000001814	-	92	58.671	ENSCSEG00000020071	-	99	65.789	Cynoglossus_semilaevis
ENSGAFG00000001814	-	53	70.202	ENSCVAG00000017520	-	85	71.066	Cyprinodon_variegatus
ENSGAFG00000001814	-	86	38.369	ENSCVAG00000014329	-	96	47.236	Cyprinodon_variegatus
ENSGAFG00000001814	-	94	48.223	ENSCVAG00000014299	-	99	31.618	Cyprinodon_variegatus
ENSGAFG00000001814	-	92	81.633	ENSCVAG00000017536	-	100	70.338	Cyprinodon_variegatus
ENSGAFG00000001814	-	88	49.246	ENSDARG00000040445	si:ch211-219a4.3	100	34.211	Danio_rerio
ENSGAFG00000001814	-	99	33.861	ENSDARG00000099377	si:cabz01030277.1	99	34.370	Danio_rerio
ENSGAFG00000001814	-	79	31.558	ENSDARG00000105415	si:ch211-163c2.1	98	34.043	Danio_rerio
ENSGAFG00000001814	-	92	34.217	ENSDARG00000100612	si:ch211-163c2.1	97	34.217	Danio_rerio
ENSGAFG00000001814	-	86	51.777	ENSDNOG00000015400	PARP14	64	30.377	Dasypus_novemcinctus
ENSGAFG00000001814	-	87	50.505	ENSETEG00000002790	PARP14	84	33.151	Echinops_telfairi
ENSGAFG00000001814	-	85	33.690	ENSEBUG00000002611	-	76	42.714	Eptatretus_burgeri
ENSGAFG00000001814	-	56	51.765	ENSEBUG00000000526	-	68	52.500	Eptatretus_burgeri
ENSGAFG00000001814	-	87	52.525	ENSEEUG00000002136	PARP14	72	30.757	Erinaceus_europaeus
ENSGAFG00000001814	-	91	45.128	ENSELUG00000009798	si:ch211-219a4.3	59	34.115	Esox_lucius
ENSGAFG00000001814	-	92	59.296	ENSELUG00000007568	-	99	44.988	Esox_lucius
ENSGAFG00000001814	-	53	49.510	ENSFHEG00000008820	-	89	49.510	Fundulus_heteroclitus
ENSGAFG00000001814	-	92	81.633	ENSFHEG00000008557	-	100	72.340	Fundulus_heteroclitus
ENSGAFG00000001814	-	88	38.647	ENSGMOG00000011231	-	98	38.647	Gadus_morhua
ENSGAFG00000001814	-	89	69.388	ENSGACG00000018943	-	99	55.727	Gasterosteus_aculeatus
ENSGAFG00000001814	-	92	42.857	ENSGACG00000002353	si:ch211-219a4.3	97	42.857	Gasterosteus_aculeatus
ENSGAFG00000001814	-	84	38.994	ENSHBUG00000005369	-	97	44.615	Haplochromis_burtoni
ENSGAFG00000001814	-	92	74.396	ENSHBUG00000018235	-	99	78.061	Haplochromis_burtoni
ENSGAFG00000001814	-	52	44.444	ENSHBUG00000005337	-	97	30.661	Haplochromis_burtoni
ENSGAFG00000001814	-	99	33.209	ENSIPUG00000008165	si:cabz01030277.1	99	33.086	Ictalurus_punctatus
ENSGAFG00000001814	-	91	50.505	ENSSTOG00000019423	PARP14	65	30.195	Ictidomys_tridecemlineatus
ENSGAFG00000001814	-	84	39.938	ENSKMAG00000012870	-	97	51.613	Kryptolebias_marmoratus
ENSGAFG00000001814	-	92	77.949	ENSKMAG00000016827	-	99	77.949	Kryptolebias_marmoratus
ENSGAFG00000001814	-	84	39.628	ENSKMAG00000003908	-	98	51.075	Kryptolebias_marmoratus
ENSGAFG00000001814	-	52	49.239	ENSKMAG00000000939	-	86	40.065	Kryptolebias_marmoratus
ENSGAFG00000001814	-	53	74.490	ENSLBEG00000016023	-	99	56.894	Labrus_bergylta
ENSGAFG00000001814	-	52	49.490	ENSLACG00000001018	-	99	36.026	Latimeria_chalumnae
ENSGAFG00000001814	-	52	47.179	ENSLACG00000009107	-	96	46.154	Latimeria_chalumnae
ENSGAFG00000001814	-	91	57.360	ENSLOCG00000000942	-	99	37.803	Lepisosteus_oculatus
ENSGAFG00000001814	-	91	48.889	ENSLOCG00000000239	si:cabz01030277.1	99	36.463	Lepisosteus_oculatus
ENSGAFG00000001814	-	87	52.525	ENSMFAG00000038097	PARP14	72	30.112	Macaca_fascicularis
ENSGAFG00000001814	-	87	52.525	ENSMLEG00000041852	PARP14	64	31.157	Mandrillus_leucophaeus
ENSGAFG00000001814	-	99	33.495	ENSMAMG00000014821	si:cabz01030277.1	99	33.575	Mastacembelus_armatus
ENSGAFG00000001814	-	88	74.033	ENSMAMG00000012368	-	99	57.398	Mastacembelus_armatus
ENSGAFG00000001814	-	92	34.783	ENSMZEG00005025708	-	97	48.171	Maylandia_zebra
ENSGAFG00000001814	-	92	73.913	ENSMZEG00005020476	-	99	58.842	Maylandia_zebra
ENSGAFG00000001814	-	85	39.688	ENSMZEG00005026601	-	89	49.246	Maylandia_zebra
ENSGAFG00000001814	-	84	47.449	ENSMZEG00005021082	-	99	31.990	Maylandia_zebra
ENSGAFG00000001814	-	86	50.649	ENSMZEG00005025678	si:ch211-219a4.3	93	45.455	Maylandia_zebra
ENSGAFG00000001814	-	52	49.246	ENSMGAG00000016901	-	99	32.519	Meleagris_gallopavo
ENSGAFG00000001814	-	88	47.826	ENSMOCG00000021121	Parp14	73	34.177	Microtus_ochrogaster
ENSGAFG00000001814	-	90	40.816	ENSMMOG00000005277	-	98	30.564	Mola_mola
ENSGAFG00000001814	-	90	45.918	ENSMMOG00000005282	-	97	32.500	Mola_mola
ENSGAFG00000001814	-	52	38.265	ENSMODG00000007157	-	96	32.459	Monodelphis_domestica
ENSGAFG00000001814	-	83	31.098	ENSMALG00000015837	-	98	31.220	Monopterus_albus
ENSGAFG00000001814	-	54	46.078	ENSMALG00000015864	-	99	30.909	Monopterus_albus
ENSGAFG00000001814	-	52	46.970	ENSMLUG00000027718	-	88	33.995	Myotis_lucifugus
ENSGAFG00000001814	-	70	42.424	ENSNBRG00000003877	-	87	42.424	Neolamprologus_brichardi
ENSGAFG00000001814	-	92	65.988	ENSNBRG00000005232	-	99	77.551	Neolamprologus_brichardi
ENSGAFG00000001814	-	70	39.544	ENSNBRG00000004017	-	91	47.423	Neolamprologus_brichardi
ENSGAFG00000001814	-	86	50.254	ENSOPRG00000013872	PARP14	51	43.478	Ochotona_princeps
ENSGAFG00000001814	-	55	72.464	ENSONIG00000007870	-	99	61.248	Oreochromis_niloticus
ENSGAFG00000001814	-	85	35.952	ENSONIG00000017776	-	93	47.853	Oreochromis_niloticus
ENSGAFG00000001814	-	85	33.690	ENSONIG00000004517	-	82	33.690	Oreochromis_niloticus
ENSGAFG00000001814	-	82	49.495	ENSONIG00000012986	-	99	33.512	Oreochromis_niloticus
ENSGAFG00000001814	-	84	44.103	ENSORLG00000008781	-	91	33.439	Oryzias_latipes
ENSGAFG00000001814	-	84	45.274	ENSORLG00000007845	-	91	34.345	Oryzias_latipes
ENSGAFG00000001814	-	99	32.848	ENSORLG00020005938	-	99	32.848	Oryzias_latipes_hni
ENSGAFG00000001814	-	68	41.923	ENSORLG00015003387	-	74	46.193	Oryzias_latipes_hsok
ENSGAFG00000001814	-	86	43.590	ENSORLG00015021971	si:ch211-219a4.3	88	45.690	Oryzias_latipes_hsok
ENSGAFG00000001814	-	86	40.184	ENSOMEG00000016395	-	99	48.241	Oryzias_melastigma
ENSGAFG00000001814	-	86	38.272	ENSOMEG00000016369	-	95	45.933	Oryzias_melastigma
ENSGAFG00000001814	-	99	62.241	ENSOMEG00000022143	-	99	52.760	Oryzias_melastigma
ENSGAFG00000001814	-	86	39.571	ENSOMEG00000016380	-	94	48.241	Oryzias_melastigma
ENSGAFG00000001814	-	87	44.898	ENSOMEG00000019715	si:ch211-219a4.3	91	46.400	Oryzias_melastigma
ENSGAFG00000001814	-	54	50.732	ENSOMEG00000016408	-	92	43.087	Oryzias_melastigma
ENSGAFG00000001814	-	86	59.694	ENSPKIG00000022431	-	99	39.303	Paramormyrops_kingsleyae
ENSGAFG00000001814	-	52	44.388	ENSPKIG00000004135	-	86	38.339	Paramormyrops_kingsleyae
ENSGAFG00000001814	-	86	44.898	ENSPKIG00000004027	-	99	31.397	Paramormyrops_kingsleyae
ENSGAFG00000001814	-	93	52.542	ENSPMGG00000004482	-	96	59.898	Periophthalmus_magnuspinnatus
ENSGAFG00000001814	-	52	46.154	ENSPMGG00000007159	-	97	33.078	Periophthalmus_magnuspinnatus
ENSGAFG00000001814	-	53	38.308	ENSPMGG00000017987	-	92	37.811	Periophthalmus_magnuspinnatus
ENSGAFG00000001814	-	86	43.333	ENSPMAG00000001173	-	53	33.166	Petromyzon_marinus
ENSGAFG00000001814	-	76	47.097	ENSPMAG00000008302	-	75	47.742	Petromyzon_marinus
ENSGAFG00000001814	-	85	42.180	ENSPMAG00000008296	-	98	41.667	Petromyzon_marinus
ENSGAFG00000001814	-	52	47.449	ENSPFOG00000024351	-	76	36.702	Poecilia_formosa
ENSGAFG00000001814	-	52	45.918	ENSPFOG00000021893	-	83	36.991	Poecilia_formosa
ENSGAFG00000001814	-	53	70.707	ENSPFOG00000023812	-	98	61.679	Poecilia_formosa
ENSGAFG00000001814	-	95	48.187	ENSPFOG00000016743	si:ch211-219a4.3	76	51.445	Poecilia_formosa
ENSGAFG00000001814	-	100	85.499	ENSPFOG00000000012	-	100	85.687	Poecilia_formosa
ENSGAFG00000001814	-	99	32.578	ENSPFOG00000005470	-	99	32.371	Poecilia_formosa
ENSGAFG00000001814	-	68	37.891	ENSPLAG00000004362	-	84	46.409	Poecilia_latipinna
ENSGAFG00000001814	-	52	47.449	ENSPLAG00000004367	-	77	36.702	Poecilia_latipinna
ENSGAFG00000001814	-	59	65.455	ENSPLAG00000023515	-	90	61.132	Poecilia_latipinna
ENSGAFG00000001814	-	59	65.455	ENSPMEG00000004356	-	90	61.132	Poecilia_mexicana
ENSGAFG00000001814	-	100	85.562	ENSPMEG00000004328	-	100	85.750	Poecilia_mexicana
ENSGAFG00000001814	-	52	47.449	ENSPMEG00000012541	-	77	36.702	Poecilia_mexicana
ENSGAFG00000001814	-	52	46.231	ENSPMEG00000012524	-	94	32.288	Poecilia_mexicana
ENSGAFG00000001814	-	85	39.091	ENSPREG00000003560	-	98	46.734	Poecilia_reticulata
ENSGAFG00000001814	-	60	45.415	ENSPREG00000003531	-	76	38.235	Poecilia_reticulata
ENSGAFG00000001814	-	52	46.701	ENSPREG00000003544	-	99	37.500	Poecilia_reticulata
ENSGAFG00000001814	-	100	86.252	ENSPREG00000007508	-	99	87.269	Poecilia_reticulata
ENSGAFG00000001814	-	91	37.186	ENSPREG00000019182	-	56	57.317	Poecilia_reticulata
ENSGAFG00000001814	-	85	53.067	ENSPREG00000007470	-	99	71.134	Poecilia_reticulata
ENSGAFG00000001814	-	88	44.898	ENSPREG00000019242	-	99	31.586	Poecilia_reticulata
ENSGAFG00000001814	-	88	45.771	ENSPVAG00000012722	PARP14	63	30.998	Pteropus_vampyrus
ENSGAFG00000001814	-	85	39.375	ENSPNYG00000021378	-	89	48.744	Pundamilia_nyererei
ENSGAFG00000001814	-	92	32.973	ENSPNYG00000001714	-	92	47.853	Pundamilia_nyererei
ENSGAFG00000001814	-	85	36.957	ENSPNYG00000021303	-	97	44.279	Pundamilia_nyererei
ENSGAFG00000001814	-	98	49.239	ENSPNYG00000001481	si:ch211-219a4.3	69	30.450	Pundamilia_nyererei
ENSGAFG00000001814	-	84	44.949	ENSPNYG00000013937	-	93	44.949	Pundamilia_nyererei
ENSGAFG00000001814	-	54	47.549	ENSPNAG00000020642	-	99	31.887	Pygocentrus_nattereri
ENSGAFG00000001814	-	97	50.254	ENSPNAG00000028188	si:ch211-219a4.3	67	31.441	Pygocentrus_nattereri
ENSGAFG00000001814	-	87	50.952	ENSSBOG00000032798	PARP14	65	33.281	Saimiri_boliviensis_boliviensis
ENSGAFG00000001814	-	92	47.887	ENSSFOG00015012828	-	93	54.950	Scleropages_formosus
ENSGAFG00000001814	-	86	44.388	ENSSFOG00015001605	-	88	45.098	Scleropages_formosus
ENSGAFG00000001814	-	52	48.241	ENSSMAG00000007826	-	99	48.241	Scophthalmus_maximus
ENSGAFG00000001814	-	92	81.218	ENSSDUG00000001575	-	100	77.723	Seriola_dumerili
ENSGAFG00000001814	-	84	46.465	ENSSDUG00000007589	-	91	34.021	Seriola_dumerili
ENSGAFG00000001814	-	85	46.970	ENSSDUG00000007576	-	99	34.596	Seriola_dumerili
ENSGAFG00000001814	-	52	47.475	ENSSLDG00000005960	-	85	40.645	Seriola_lalandi_dorsalis
ENSGAFG00000001814	-	92	80.711	ENSSLDG00000005702	-	96	79.602	Seriola_lalandi_dorsalis
ENSGAFG00000001814	-	86	50.505	ENSSARG00000011299	PARP14	62	33.740	Sorex_araneus
ENSGAFG00000001814	-	92	78.571	ENSSPAG00000023229	-	99	59.703	Stegastes_partitus
ENSGAFG00000001814	-	99	32.547	ENSSPAG00000004785	-	99	32.547	Stegastes_partitus
ENSGAFG00000001814	-	83	34.230	ENSSPAG00000004771	-	95	33.944	Stegastes_partitus
ENSGAFG00000001814	-	52	45.408	ENSTRUG00000004556	-	87	35.641	Takifugu_rubripes
ENSGAFG00000001814	-	89	43.878	ENSTRUG00000004579	-	94	39.130	Takifugu_rubripes
ENSGAFG00000001814	-	85	42.564	ENSTNIG00000008883	-	86	42.564	Tetraodon_nigroviridis
ENSGAFG00000001814	-	83	43.631	ENSUAMG00000004120	-	84	47.739	Ursus_americanus
ENSGAFG00000001814	-	87	51.269	ENSVPAG00000002158	PARP14	70	51.269	Vicugna_pacos
ENSGAFG00000001814	-	87	50.761	ENSVVUG00000022533	PARP14	55	44.815	Vulpes_vulpes
ENSGAFG00000001814	-	78	35.088	ENSXETG00000031130	-	94	35.714	Xenopus_tropicalis
ENSGAFG00000001814	-	86	46.000	ENSXETG00000023400	-	77	47.644	Xenopus_tropicalis
ENSGAFG00000001814	-	52	46.465	ENSXETG00000010161	parp14.3	99	30.485	Xenopus_tropicalis
ENSGAFG00000001814	-	82	37.113	ENSXETG00000004526	-	91	37.113	Xenopus_tropicalis
ENSGAFG00000001814	-	88	92.857	ENSXCOG00000006581	-	94	90.708	Xiphophorus_couchianus
ENSGAFG00000001814	-	87	44.898	ENSXCOG00000014707	-	90	48.408	Xiphophorus_couchianus
ENSGAFG00000001814	-	54	47.783	ENSXMAG00000027110	-	71	40.952	Xiphophorus_maculatus
ENSGAFG00000001814	-	50	46.316	ENSXMAG00000010352	-	82	46.316	Xiphophorus_maculatus
ENSGAFG00000001814	-	84	46.193	ENSXMAG00000001866	-	97	33.333	Xiphophorus_maculatus
ENSGAFG00000001814	-	99	88.756	ENSXMAG00000016244	-	99	88.756	Xiphophorus_maculatus
ENSGAFG00000001814	-	55	68.116	ENSXMAG00000024189	-	99	59.489	Xiphophorus_maculatus