EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000001930 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 9407 bases
Position: chrNHOQ01002487.1:12320-21726
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000002924	CPL	PF08144.11	4e-46	1	1
ENSGAFP00000002911	CPL	PF08144.11	6.4e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000002946	-	1758	-	ENSGAFP00000002911	585 (aa)	-	-
ENSGAFT00000002959	-	1665	-	ENSGAFP00000002924	554 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000001930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000001930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000001930	pum3	62	61.983	ENSG00000080608	PUM3	86	52.381	Homo_sapiens
ENSGAFG00000001930	pum3	64	73.810	ENSAPOG00000020252	pum3	58	73.810	Acanthochromis_polyacanthus
ENSGAFG00000001930	pum3	62	61.326	ENSAMEG00000012187	PUM3	55	61.326	Ailuropoda_melanoleuca
ENSGAFG00000001930	pum3	62	75.342	ENSACIG00000009786	pum3	62	75.342	Amphilophus_citrinellus
ENSGAFG00000001930	pum3	64	73.545	ENSAOCG00000004439	pum3	58	73.545	Amphiprion_ocellaris
ENSGAFG00000001930	pum3	62	75.549	ENSAPEG00000020523	pum3	59	75.549	Amphiprion_percula
ENSGAFG00000001930	pum3	62	76.374	ENSATEG00000005799	pum3	56	76.374	Anabas_testudineus
ENSGAFG00000001930	pum3	62	62.050	ENSAPLG00000002920	PUM3	57	62.050	Anas_platyrhynchos
ENSGAFG00000001930	pum3	54	64.650	ENSACAG00000003174	PUM3	53	64.650	Anolis_carolinensis
ENSGAFG00000001930	pum3	62	62.259	ENSANAG00000024520	PUM3	55	62.259	Aotus_nancymaae
ENSGAFG00000001930	pum3	62	75.616	ENSACLG00000001017	pum3	56	75.616	Astatotilapia_calliptera
ENSGAFG00000001930	pum3	62	67.036	ENSAMXG00000020911	pum3	57	67.036	Astyanax_mexicanus
ENSGAFG00000001930	pum3	62	61.050	ENSBTAG00000013357	PUM3	55	61.050	Bos_taurus
ENSGAFG00000001930	pum3	62	61.878	ENSCJAG00000010917	PUM3	55	61.878	Callithrix_jacchus
ENSGAFG00000001930	pum3	62	60.497	ENSCAFG00000002035	PUM3	55	60.497	Canis_familiaris
ENSGAFG00000001930	pum3	62	60.497	ENSCAFG00020026867	PUM3	55	60.497	Canis_lupus_dingo
ENSGAFG00000001930	pum3	62	61.602	ENSCHIG00000021559	PUM3	55	61.602	Capra_hircus
ENSGAFG00000001930	pum3	65	58.793	ENSTSYG00000007481	PUM3	58	58.793	Carlito_syrichta
ENSGAFG00000001930	pum3	62	59.341	ENSCAPG00000010592	-	55	59.341	Cavia_aperea
ENSGAFG00000001930	pum3	62	61.433	ENSCPOG00000008552	-	55	61.433	Cavia_porcellus
ENSGAFG00000001930	pum3	62	62.431	ENSCCAG00000032650	PUM3	55	62.431	Cebus_capucinus
ENSGAFG00000001930	pum3	62	61.708	ENSCATG00000024880	PUM3	55	61.708	Cercocebus_atys
ENSGAFG00000001930	pum3	65	59.474	ENSCLAG00000011892	PUM3	58	59.474	Chinchilla_lanigera
ENSGAFG00000001930	pum3	62	61.708	ENSCSAG00000008691	PUM3	55	61.708	Chlorocebus_sabaeus
ENSGAFG00000001930	pum3	66	52.417	ENSCHOG00000002535	PUM3	55	53.684	Choloepus_hoffmanni
ENSGAFG00000001930	pum3	62	63.712	ENSCPBG00000025470	PUM3	53	63.712	Chrysemys_picta_bellii
ENSGAFG00000001930	pum3	67	37.437	ENSCING00000024199	-	57	41.875	Ciona_intestinalis
ENSGAFG00000001930	pum3	75	36.569	ENSCSAVG00000006072	-	67	39.779	Ciona_savignyi
ENSGAFG00000001930	pum3	62	61.983	ENSCANG00000006142	PUM3	55	61.983	Colobus_angolensis_palliatus
ENSGAFG00000001930	pum3	62	61.326	ENSCGRG00001016402	Pum3	55	61.326	Cricetulus_griseus_chok1gshd
ENSGAFG00000001930	pum3	62	61.326	ENSCGRG00000010207	Pum3	55	61.326	Cricetulus_griseus_crigri
ENSGAFG00000001930	pum3	51	75.088	ENSCSEG00000001565	pum3	52	72.241	Cynoglossus_semilaevis
ENSGAFG00000001930	pum3	62	65.928	ENSDARG00000087779	pum3	57	65.928	Danio_rerio
ENSGAFG00000001930	pum3	66	59.288	ENSETEG00000015331	PUM3	60	59.288	Echinops_telfairi
ENSGAFG00000001930	pum3	57	43.023	ENSEBUG00000011586	pum3	50	43.068	Eptatretus_burgeri
ENSGAFG00000001930	pum3	62	62.155	ENSEASG00005010350	PUM3	55	62.155	Equus_asinus_asinus
ENSGAFG00000001930	pum3	62	61.878	ENSECAG00000017193	PUM3	55	61.878	Equus_caballus
ENSGAFG00000001930	pum3	57	50.000	ENSEEUG00000010314	PUM3	55	50.000	Erinaceus_europaeus
ENSGAFG00000001930	pum3	64	65.691	ENSELUG00000002215	pum3	58	65.691	Esox_lucius
ENSGAFG00000001930	pum3	62	62.088	ENSFALG00000010509	PUM3	56	62.088	Ficedula_albicollis
ENSGAFG00000001930	pum3	62	62.155	ENSFDAG00000021027	PUM3	58	60.000	Fukomys_damarensis
ENSGAFG00000001930	pum3	62	81.868	ENSFHEG00000015576	pum3	68	81.868	Fundulus_heteroclitus
ENSGAFG00000001930	pum3	62	67.222	ENSGMOG00000014217	pum3	66	67.222	Gadus_morhua
ENSGAFG00000001930	pum3	62	62.327	ENSGALG00000010178	PUM3	56	62.327	Gallus_gallus
ENSGAFG00000001930	pum3	62	74.656	ENSGACG00000017878	pum3	66	74.656	Gasterosteus_aculeatus
ENSGAFG00000001930	pum3	62	62.604	ENSGAGG00000018983	PUM3	58	62.604	Gopherus_agassizii
ENSGAFG00000001930	pum3	62	61.983	ENSGGOG00000006143	PUM3	55	61.983	Gorilla_gorilla
ENSGAFG00000001930	pum3	62	65.753	ENSHBUG00000012903	pum3	56	65.753	Haplochromis_burtoni
ENSGAFG00000001930	pum3	62	61.602	ENSHGLG00000015868	-	55	61.602	Heterocephalus_glaber_female
ENSGAFG00000001930	pum3	62	61.602	ENSHGLG00100018825	PUM3	55	61.602	Heterocephalus_glaber_male
ENSGAFG00000001930	pum3	62	74.451	ENSHCOG00000010306	pum3	54	74.451	Hippocampus_comes
ENSGAFG00000001930	pum3	62	69.890	ENSIPUG00000024801	pum3	57	69.890	Ictalurus_punctatus
ENSGAFG00000001930	pum3	62	61.326	ENSSTOG00000009586	PUM3	55	61.326	Ictidomys_tridecemlineatus
ENSGAFG00000001930	pum3	62	59.669	ENSJJAG00000012563	Pum3	55	59.669	Jaculus_jaculus
ENSGAFG00000001930	pum3	65	75.328	ENSKMAG00000010277	pum3	59	75.328	Kryptolebias_marmoratus
ENSGAFG00000001930	pum3	62	74.725	ENSLBEG00000012213	pum3	55	74.725	Labrus_bergylta
ENSGAFG00000001930	pum3	62	57.064	ENSLACG00000008312	PUM3	56	57.064	Latimeria_chalumnae
ENSGAFG00000001930	pum3	62	64.463	ENSLOCG00000012529	pum3	57	64.463	Lepisosteus_oculatus
ENSGAFG00000001930	pum3	64	60.212	ENSLAFG00000017341	PUM3	58	59.737	Loxodonta_africana
ENSGAFG00000001930	pum3	62	61.708	ENSMFAG00000001430	PUM3	55	61.708	Macaca_fascicularis
ENSGAFG00000001930	pum3	62	61.708	ENSMMUG00000002362	PUM3	55	61.708	Macaca_mulatta
ENSGAFG00000001930	pum3	62	61.708	ENSMNEG00000035288	PUM3	55	61.708	Macaca_nemestrina
ENSGAFG00000001930	pum3	62	61.708	ENSMLEG00000034820	PUM3	55	61.708	Mandrillus_leucophaeus
ENSGAFG00000001930	pum3	62	75.000	ENSMAMG00000022861	pum3	55	75.000	Mastacembelus_armatus
ENSGAFG00000001930	pum3	62	75.616	ENSMZEG00005014205	pum3	54	75.616	Maylandia_zebra
ENSGAFG00000001930	pum3	62	53.699	ENSMGAG00000002255	PUM3	55	53.699	Meleagris_gallopavo
ENSGAFG00000001930	pum3	62	61.050	ENSMAUG00000009733	Pum3	55	61.050	Mesocricetus_auratus
ENSGAFG00000001930	pum3	62	61.602	ENSMOCG00000019519	-	55	61.602	Microtus_ochrogaster
ENSGAFG00000001930	pum3	62	59.116	ENSMOCG00000014830	-	56	59.116	Microtus_ochrogaster
ENSGAFG00000001930	pum3	62	66.484	ENSMMOG00000012184	pum3	55	66.484	Mola_mola
ENSGAFG00000001930	pum3	65	56.316	ENSMODG00000015417	PUM3	52	56.316	Monodelphis_domestica
ENSGAFG00000001930	pum3	62	76.099	ENSMALG00000022164	pum3	54	76.099	Monopterus_albus
ENSGAFG00000001930	pum3	62	59.392	MGP_CAROLIEiJ_G0022845	Pum3	55	59.392	Mus_caroli
ENSGAFG00000001930	pum3	62	58.840	ENSMUSG00000041360	Pum3	55	58.840	Mus_musculus
ENSGAFG00000001930	pum3	62	59.116	MGP_PahariEiJ_G0014338	Pum3	55	59.116	Mus_pahari
ENSGAFG00000001930	pum3	62	59.116	MGP_SPRETEiJ_G0023763	Pum3	55	59.116	Mus_spretus
ENSGAFG00000001930	pum3	62	59.669	ENSMPUG00000005125	PUM3	55	59.669	Mustela_putorius_furo
ENSGAFG00000001930	pum3	62	61.157	ENSMLUG00000002309	PUM3	55	61.157	Myotis_lucifugus
ENSGAFG00000001930	pum3	62	57.182	ENSNGAG00000019468	Pum3	55	57.182	Nannospalax_galili
ENSGAFG00000001930	pum3	62	71.781	ENSNBRG00000021370	pum3	56	71.781	Neolamprologus_brichardi
ENSGAFG00000001930	pum3	62	61.983	ENSNLEG00000008712	PUM3	55	61.983	Nomascus_leucogenys
ENSGAFG00000001930	pum3	58	33.851	ENSMEUG00000013606	-	63	34.639	Notamacropus_eugenii
ENSGAFG00000001930	pum3	62	55.769	ENSODEG00000016477	-	54	55.769	Octodon_degus
ENSGAFG00000001930	pum3	62	61.326	ENSODEG00000003625	-	55	61.326	Octodon_degus
ENSGAFG00000001930	pum3	62	76.164	ENSONIG00000012733	pum3	55	76.164	Oreochromis_niloticus
ENSGAFG00000001930	pum3	65	57.180	ENSOANG00000014995	PUM3	69	57.330	Ornithorhynchus_anatinus
ENSGAFG00000001930	pum3	62	60.497	ENSOCUG00000004189	-	55	60.497	Oryctolagus_cuniculus
ENSGAFG00000001930	pum3	62	60.221	ENSOCUG00000026104	-	55	60.221	Oryctolagus_cuniculus
ENSGAFG00000001930	pum3	62	72.253	ENSORLG00000014935	pum3	56	72.253	Oryzias_latipes
ENSGAFG00000001930	pum3	62	71.978	ENSORLG00020002841	pum3	56	71.978	Oryzias_latipes_hni
ENSGAFG00000001930	pum3	62	72.527	ENSORLG00015015906	pum3	56	72.527	Oryzias_latipes_hsok
ENSGAFG00000001930	pum3	62	71.703	ENSOMEG00000009427	pum3	56	71.703	Oryzias_melastigma
ENSGAFG00000001930	pum3	64	59.524	ENSOGAG00000008125	-	58	59.524	Otolemur_garnettii
ENSGAFG00000001930	pum3	61	47.945	ENSOGAG00000033481	-	56	47.945	Otolemur_garnettii
ENSGAFG00000001930	pum3	62	61.050	ENSOARG00000013337	PUM3	55	61.050	Ovis_aries
ENSGAFG00000001930	pum3	62	61.708	ENSPPAG00000041337	PUM3	55	61.708	Pan_paniscus
ENSGAFG00000001930	pum3	62	61.602	ENSPPRG00000000809	PUM3	55	61.602	Panthera_pardus
ENSGAFG00000001930	pum3	62	61.602	ENSPTIG00000021934	PUM3	55	61.602	Panthera_tigris_altaica
ENSGAFG00000001930	pum3	62	61.983	ENSPTRG00000020735	PUM3	55	61.983	Pan_troglodytes
ENSGAFG00000001930	pum3	62	61.983	ENSPANG00000025118	PUM3	55	61.983	Papio_anubis
ENSGAFG00000001930	pum3	62	64.560	ENSPKIG00000022249	pum3	58	61.918	Paramormyrops_kingsleyae
ENSGAFG00000001930	pum3	62	62.983	ENSPSIG00000016272	PUM3	56	62.983	Pelodiscus_sinensis
ENSGAFG00000001930	pum3	65	67.717	ENSPMGG00000021261	pum3	75	67.717	Periophthalmus_magnuspinnatus
ENSGAFG00000001930	pum3	62	42.700	ENSPEMG00000019340	-	51	42.700	Peromyscus_maniculatus_bairdii
ENSGAFG00000001930	pum3	65	56.992	ENSPCIG00000030598	PUM3	50	56.992	Phascolarctos_cinereus
ENSGAFG00000001930	pum3	62	89.286	ENSPFOG00000001719	pum3	60	89.286	Poecilia_formosa
ENSGAFG00000001930	pum3	62	89.286	ENSPLAG00000020010	pum3	56	89.286	Poecilia_latipinna
ENSGAFG00000001930	pum3	62	89.560	ENSPMEG00000017451	pum3	56	89.560	Poecilia_mexicana
ENSGAFG00000001930	pum3	62	62.259	ENSPPYG00000019255	PUM3	55	62.259	Pongo_abelii
ENSGAFG00000001930	pum3	64	59.151	ENSPCAG00000005797	PUM3	55	58.684	Procavia_capensis
ENSGAFG00000001930	pum3	62	61.708	ENSPCOG00000027325	PUM3	55	61.708	Propithecus_coquereli
ENSGAFG00000001930	pum3	62	61.433	ENSPVAG00000016135	PUM3	53	61.433	Pteropus_vampyrus
ENSGAFG00000001930	pum3	62	75.890	ENSPNYG00000016124	pum3	56	75.890	Pundamilia_nyererei
ENSGAFG00000001930	pum3	62	65.193	ENSPNAG00000026524	pum3	57	65.193	Pygocentrus_nattereri
ENSGAFG00000001930	pum3	62	59.945	ENSRNOG00000048356	RGD1308750	55	59.945	Rattus_norvegicus
ENSGAFG00000001930	pum3	62	60.497	ENSRNOG00000012574	Pum3	55	60.497	Rattus_norvegicus
ENSGAFG00000001930	pum3	62	61.433	ENSRBIG00000036924	PUM3	55	61.157	Rhinopithecus_bieti
ENSGAFG00000001930	pum3	62	61.708	ENSRROG00000041089	PUM3	55	61.708	Rhinopithecus_roxellana
ENSGAFG00000001930	pum3	62	61.878	ENSSBOG00000028066	PUM3	55	61.878	Saimiri_boliviensis_boliviensis
ENSGAFG00000001930	pum3	65	57.256	ENSSHAG00000003730	PUM3	58	57.256	Sarcophilus_harrisii
ENSGAFG00000001930	pum3	62	65.374	ENSSFOG00015018778	pum3	55	65.374	Scleropages_formosus
ENSGAFG00000001930	pum3	62	76.374	ENSSMAG00000013236	pum3	55	76.374	Scophthalmus_maximus
ENSGAFG00000001930	pum3	62	76.099	ENSSDUG00000001887	pum3	54	76.099	Seriola_dumerili
ENSGAFG00000001930	pum3	62	76.099	ENSSLDG00000015766	pum3	55	76.099	Seriola_lalandi_dorsalis
ENSGAFG00000001930	pum3	62	55.801	ENSSARG00000000579	PUM3	58	55.801	Sorex_araneus
ENSGAFG00000001930	pum3	64	60.106	ENSSPUG00000001707	PUM3	59	60.106	Sphenodon_punctatus
ENSGAFG00000001930	pum3	63	75.204	ENSSPAG00000003976	pum3	56	75.204	Stegastes_partitus
ENSGAFG00000001930	pum3	64	59.416	ENSSSCG00000005227	PUM3	57	59.416	Sus_scrofa
ENSGAFG00000001930	pum3	62	61.264	ENSTGUG00000005339	PUM3	57	61.264	Taeniopygia_guttata
ENSGAFG00000001930	pum3	62	76.374	ENSTRUG00000004074	pum3	54	76.374	Takifugu_rubripes
ENSGAFG00000001930	pum3	62	76.796	ENSTNIG00000010325	pum3	57	76.796	Tetraodon_nigroviridis
ENSGAFG00000001930	pum3	62	49.862	ENSTBEG00000013058	PUM3	56	49.862	Tupaia_belangeri
ENSGAFG00000001930	pum3	64	59.416	ENSTTRG00000001062	PUM3	58	57.506	Tursiops_truncatus
ENSGAFG00000001930	pum3	62	61.602	ENSUMAG00000018443	PUM3	76	61.602	Ursus_maritimus
ENSGAFG00000001930	pum3	62	61.326	ENSVPAG00000010766	PUM3	55	61.326	Vicugna_pacos
ENSGAFG00000001930	pum3	62	60.773	ENSVVUG00000006527	PUM3	55	60.773	Vulpes_vulpes
ENSGAFG00000001930	pum3	70	45.215	ENSXETG00000011707	pum3	63	45.215	Xenopus_tropicalis
ENSGAFG00000001930	pum3	63	87.738	ENSXCOG00000006725	pum3	60	87.738	Xiphophorus_couchianus
ENSGAFG00000001930	pum3	62	91.781	ENSXMAG00000002926	pum3	57	91.781	Xiphophorus_maculatus