EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000002063 (Gene tree)
Gene ID: -
Gene Symbol: utp23
Alias: fc04b12|wu:fc04b12|zgc:110214
Full Name: UTP23%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2309 bases
Position: chrNHOQ01002733.1:390747-393055
Accession: ZDB-GENE-050417-353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003067	Fcf1	PF04900.12	3.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003102	-	786	-	ENSGAFP00000003067	261 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002063	utp23	82	63.551	ENSG00000147679	UTP23	96	66.667	Homo_sapiens
ENSGAFG00000002063	utp23	56	78.767	ENSAPOG00000004608	-	78	76.190	Acanthochromis_polyacanthus
ENSGAFG00000002063	utp23	80	82.775	ENSAPOG00000004620	utp23	91	80.519	Acanthochromis_polyacanthus
ENSGAFG00000002063	utp23	56	78.231	ENSAPOG00000013233	UTP23	71	75.740	Acanthochromis_polyacanthus
ENSGAFG00000002063	utp23	52	31.655	ENSAPOG00000010473	fcf1	68	31.884	Acanthochromis_polyacanthus
ENSGAFG00000002063	utp23	80	62.679	ENSAMEG00000010317	UTP23	91	61.062	Ailuropoda_melanoleuca
ENSGAFG00000002063	utp23	87	92.105	ENSACIG00000013638	utp23	86	92.105	Amphilophus_citrinellus
ENSGAFG00000002063	utp23	89	82.251	ENSAOCG00000016307	utp23	91	81.818	Amphiprion_ocellaris
ENSGAFG00000002063	utp23	52	30.935	ENSAOCG00000003752	fcf1	68	31.159	Amphiprion_ocellaris
ENSGAFG00000002063	utp23	52	30.935	ENSAPEG00000011644	fcf1	74	31.159	Amphiprion_percula
ENSGAFG00000002063	utp23	89	83.117	ENSAPEG00000018976	utp23	91	83.117	Amphiprion_percula
ENSGAFG00000002063	utp23	95	92.339	ENSATEG00000007509	utp23	96	91.935	Anabas_testudineus
ENSGAFG00000002063	utp23	80	64.286	ENSACAG00000011061	UTP23	89	63.274	Anolis_carolinensis
ENSGAFG00000002063	utp23	82	61.682	ENSANAG00000036252	-	81	60.766	Aotus_nancymaae
ENSGAFG00000002063	utp23	82	62.150	ENSANAG00000025273	-	84	61.244	Aotus_nancymaae
ENSGAFG00000002063	utp23	93	70.492	ENSAMXG00000020989	utp23	82	73.333	Astyanax_mexicanus
ENSGAFG00000002063	utp23	83	62.212	ENSBTAG00000040422	UTP23	91	60.619	Bos_taurus
ENSGAFG00000002063	utp23	59	44.872	WBGene00016411	C34E10.10	84	38.426	Caenorhabditis_elegans
ENSGAFG00000002063	utp23	82	62.150	ENSCJAG00000005903	UTP23	84	61.244	Callithrix_jacchus
ENSGAFG00000002063	utp23	80	63.636	ENSCAFG00000000821	UTP23	91	61.947	Canis_familiaris
ENSGAFG00000002063	utp23	80	63.636	ENSCAFG00020004174	UTP23	91	61.947	Canis_lupus_dingo
ENSGAFG00000002063	utp23	83	62.212	ENSCHIG00000019828	UTP23	91	60.619	Capra_hircus
ENSGAFG00000002063	utp23	82	64.019	ENSTSYG00000001644	UTP23	84	62.201	Carlito_syrichta
ENSGAFG00000002063	utp23	84	60.909	ENSCPOG00000034561	UTP23	83	60.177	Cavia_porcellus
ENSGAFG00000002063	utp23	80	62.201	ENSCCAG00000030228	UTP23	84	62.201	Cebus_capucinus
ENSGAFG00000002063	utp23	82	62.150	ENSCATG00000035129	UTP23	84	61.244	Cercocebus_atys
ENSGAFG00000002063	utp23	80	61.244	ENSCLAG00000005108	-	84	61.244	Chinchilla_lanigera
ENSGAFG00000002063	utp23	80	54.067	ENSCLAG00000000531	-	91	54.067	Chinchilla_lanigera
ENSGAFG00000002063	utp23	82	62.150	ENSCSAG00000010933	UTP23	84	61.244	Chlorocebus_sabaeus
ENSGAFG00000002063	utp23	80	64.593	ENSCHOG00000003145	UTP23	83	62.679	Choloepus_hoffmanni
ENSGAFG00000002063	utp23	83	66.359	ENSCPBG00000001634	UTP23	90	63.717	Chrysemys_picta_bellii
ENSGAFG00000002063	utp23	53	32.857	ENSCING00000018434	-	62	34.375	Ciona_intestinalis
ENSGAFG00000002063	utp23	80	51.887	ENSCING00000012577	-	94	48.804	Ciona_intestinalis
ENSGAFG00000002063	utp23	53	32.857	ENSCSAVG00000004997	-	65	34.375	Ciona_savignyi
ENSGAFG00000002063	utp23	80	52.381	ENSCSAVG00000003273	-	95	50.476	Ciona_savignyi
ENSGAFG00000002063	utp23	82	62.617	ENSCANG00000028461	UTP23	78	61.722	Colobus_angolensis_palliatus
ENSGAFG00000002063	utp23	85	61.435	ENSCGRG00001005218	Utp23	90	61.062	Cricetulus_griseus_chok1gshd
ENSGAFG00000002063	utp23	82	90.187	ENSCSEG00000011409	utp23	88	86.580	Cynoglossus_semilaevis
ENSGAFG00000002063	utp23	95	88.710	ENSCVAG00000003180	utp23	95	88.306	Cyprinodon_variegatus
ENSGAFG00000002063	utp23	53	34.043	ENSDARG00000102333	fcf1	69	34.043	Danio_rerio
ENSGAFG00000002063	utp23	89	79.654	ENSDARG00000105012	utp23	88	79.654	Danio_rerio
ENSGAFG00000002063	utp23	80	63.636	ENSDNOG00000033602	UTP23	83	63.636	Dasypus_novemcinctus
ENSGAFG00000002063	utp23	80	54.545	ENSDORG00000029054	-	77	54.545	Dipodomys_ordii
ENSGAFG00000002063	utp23	80	47.596	FBgn0031361	CG17652	83	47.596	Drosophila_melanogaster
ENSGAFG00000002063	utp23	82	44.601	ENSETEG00000017109	-	73	46.995	Echinops_telfairi
ENSGAFG00000002063	utp23	92	58.159	ENSETEG00000015401	-	83	60.766	Echinops_telfairi
ENSGAFG00000002063	utp23	54	30.282	ENSEBUG00000010373	fcf1	61	32.031	Eptatretus_burgeri
ENSGAFG00000002063	utp23	83	53.704	ENSEBUG00000009876	utp23	90	53.110	Eptatretus_burgeri
ENSGAFG00000002063	utp23	80	62.679	ENSEASG00005023141	UTP23	91	62.389	Equus_asinus_asinus
ENSGAFG00000002063	utp23	80	62.201	ENSECAG00000026844	UTP23	91	62.832	Equus_caballus
ENSGAFG00000002063	utp23	83	62.212	ENSEEUG00000004503	UTP23	84	62.201	Erinaceus_europaeus
ENSGAFG00000002063	utp23	94	79.268	ENSELUG00000005602	utp23	83	83.732	Esox_lucius
ENSGAFG00000002063	utp23	83	63.134	ENSFCAG00000036051	UTP23	91	61.504	Felis_catus
ENSGAFG00000002063	utp23	80	61.244	ENSFALG00000002299	UTP23	90	58.850	Ficedula_albicollis
ENSGAFG00000002063	utp23	80	62.201	ENSFDAG00000021034	UTP23	83	62.201	Fukomys_damarensis
ENSGAFG00000002063	utp23	95	91.093	ENSFHEG00000008581	utp23	96	89.879	Fundulus_heteroclitus
ENSGAFG00000002063	utp23	92	73.859	ENSGMOG00000015495	utp23	87	78.469	Gadus_morhua
ENSGAFG00000002063	utp23	83	64.055	ENSGALG00000032400	UTP23	91	61.947	Gallus_gallus
ENSGAFG00000002063	utp23	95	78.543	ENSGACG00000002979	utp23	98	78.543	Gasterosteus_aculeatus
ENSGAFG00000002063	utp23	82	64.019	ENSGGOG00000013203	UTP23	84	62.201	Gorilla_gorilla
ENSGAFG00000002063	utp23	87	92.544	ENSHBUG00000023376	utp23	89	92.105	Haplochromis_burtoni
ENSGAFG00000002063	utp23	83	52.535	ENSHGLG00000008717	-	84	54.106	Heterocephalus_glaber_female
ENSGAFG00000002063	utp23	80	61.244	ENSHGLG00000004025	UTP23	83	61.244	Heterocephalus_glaber_female
ENSGAFG00000002063	utp23	80	58.852	ENSHGLG00000020901	-	84	57.965	Heterocephalus_glaber_female
ENSGAFG00000002063	utp23	80	61.244	ENSHGLG00100018875	UTP23	83	61.244	Heterocephalus_glaber_male
ENSGAFG00000002063	utp23	79	53.659	ENSHGLG00100012817	-	93	54.545	Heterocephalus_glaber_male
ENSGAFG00000002063	utp23	93	79.752	ENSHCOG00000007006	utp23	92	82.684	Hippocampus_comes
ENSGAFG00000002063	utp23	82	79.907	ENSIPUG00000014437	utp23	82	77.143	Ictalurus_punctatus
ENSGAFG00000002063	utp23	80	61.722	ENSSTOG00000001411	UTP23	90	61.504	Ictidomys_tridecemlineatus
ENSGAFG00000002063	utp23	89	87.446	ENSKMAG00000002262	utp23	96	84.400	Kryptolebias_marmoratus
ENSGAFG00000002063	utp23	52	30.935	ENSLBEG00000000146	fcf1	68	31.159	Labrus_bergylta
ENSGAFG00000002063	utp23	95	84.646	ENSLBEG00000012819	utp23	97	84.646	Labrus_bergylta
ENSGAFG00000002063	utp23	90	66.525	ENSLACG00000014611	UTP23	83	67.464	Latimeria_chalumnae
ENSGAFG00000002063	utp23	93	66.667	ENSLOCG00000003289	utp23	82	71.292	Lepisosteus_oculatus
ENSGAFG00000002063	utp23	93	57.377	ENSLAFG00000001282	UTP23	92	59.307	Loxodonta_africana
ENSGAFG00000002063	utp23	82	62.617	ENSMFAG00000003374	UTP23	84	61.722	Macaca_fascicularis
ENSGAFG00000002063	utp23	82	62.617	ENSMMUG00000020284	UTP23	84	61.722	Macaca_mulatta
ENSGAFG00000002063	utp23	82	62.617	ENSMNEG00000028668	UTP23	84	61.722	Macaca_nemestrina
ENSGAFG00000002063	utp23	82	62.617	ENSMLEG00000032668	UTP23	78	61.722	Mandrillus_leucophaeus
ENSGAFG00000002063	utp23	95	90.323	ENSMAMG00000003259	utp23	91	91.342	Mastacembelus_armatus
ENSGAFG00000002063	utp23	87	92.105	ENSMZEG00005026398	utp23	89	91.667	Maylandia_zebra
ENSGAFG00000002063	utp23	83	64.516	ENSMGAG00000012472	UTP23	91	62.389	Meleagris_gallopavo
ENSGAFG00000002063	utp23	80	63.636	ENSMICG00000034720	UTP23	91	62.389	Microcebus_murinus
ENSGAFG00000002063	utp23	89	87.879	ENSMMOG00000014498	utp23	91	88.312	Mola_mola
ENSGAFG00000002063	utp23	82	62.150	ENSMODG00000004140	UTP23	83	61.244	Monodelphis_domestica
ENSGAFG00000002063	utp23	97	88.538	ENSMALG00000010867	utp23	99	88.142	Monopterus_albus
ENSGAFG00000002063	utp23	80	59.809	MGP_CAROLIEiJ_G0019781	Utp23	84	59.809	Mus_caroli
ENSGAFG00000002063	utp23	80	60.766	ENSMUSG00000022313	Utp23	84	60.766	Mus_musculus
ENSGAFG00000002063	utp23	80	60.287	MGP_SPRETEiJ_G0020678	Utp23	81	60.287	Mus_spretus
ENSGAFG00000002063	utp23	83	62.673	ENSMPUG00000000987	UTP23	84	62.679	Mustela_putorius_furo
ENSGAFG00000002063	utp23	80	62.201	ENSMLUG00000004345	UTP23	84	62.201	Myotis_lucifugus
ENSGAFG00000002063	utp23	87	92.544	ENSNBRG00000012946	utp23	89	92.105	Neolamprologus_brichardi
ENSGAFG00000002063	utp23	82	61.682	ENSNLEG00000032995	UTP23	77	60.766	Nomascus_leucogenys
ENSGAFG00000002063	utp23	85	59.641	ENSMEUG00000001566	UTP23	97	59.292	Notamacropus_eugenii
ENSGAFG00000002063	utp23	85	60.090	ENSOPRG00000011227	UTP23	90	60.177	Ochotona_princeps
ENSGAFG00000002063	utp23	93	56.148	ENSODEG00000018881	-	83	60.287	Octodon_degus
ENSGAFG00000002063	utp23	69	91.111	ENSONIG00000013525	utp23	88	90.556	Oreochromis_niloticus
ENSGAFG00000002063	utp23	89	48.498	ENSOANG00000004878	UTP23	81	50.254	Ornithorhynchus_anatinus
ENSGAFG00000002063	utp23	83	61.751	ENSOCUG00000007541	UTP23	90	60.177	Oryctolagus_cuniculus
ENSGAFG00000002063	utp23	95	88.259	ENSORLG00000001784	utp23	90	90.043	Oryzias_latipes
ENSGAFG00000002063	utp23	95	88.259	ENSORLG00020009731	utp23	90	89.610	Oryzias_latipes_hni
ENSGAFG00000002063	utp23	98	86.275	ENSORLG00015016970	utp23	90	90.043	Oryzias_latipes_hsok
ENSGAFG00000002063	utp23	89	89.177	ENSOMEG00000008767	utp23	90	88.745	Oryzias_melastigma
ENSGAFG00000002063	utp23	85	61.435	ENSOGAG00000017024	UTP23	91	61.504	Otolemur_garnettii
ENSGAFG00000002063	utp23	54	51.429	ENSOGAG00000033060	-	84	55.833	Otolemur_garnettii
ENSGAFG00000002063	utp23	83	62.212	ENSOARG00000010483	UTP23	91	60.619	Ovis_aries
ENSGAFG00000002063	utp23	82	64.019	ENSPPAG00000028660	UTP23	90	60.619	Pan_paniscus
ENSGAFG00000002063	utp23	83	63.134	ENSPPRG00000024902	UTP23	91	61.504	Panthera_pardus
ENSGAFG00000002063	utp23	83	63.134	ENSPTIG00000019925	UTP23	91	61.504	Panthera_tigris_altaica
ENSGAFG00000002063	utp23	82	63.551	ENSPTRG00000020521	UTP23	77	61.722	Pan_troglodytes
ENSGAFG00000002063	utp23	82	62.617	ENSPANG00000011559	UTP23	84	61.722	Papio_anubis
ENSGAFG00000002063	utp23	92	76.250	ENSPKIG00000018790	utp23	93	79.279	Paramormyrops_kingsleyae
ENSGAFG00000002063	utp23	83	65.899	ENSPSIG00000013132	UTP23	83	66.029	Pelodiscus_sinensis
ENSGAFG00000002063	utp23	89	76.623	ENSPMGG00000019770	utp23	90	75.325	Periophthalmus_magnuspinnatus
ENSGAFG00000002063	utp23	85	59.193	ENSPCIG00000018598	UTP23	81	60.287	Phascolarctos_cinereus
ENSGAFG00000002063	utp23	95	94.758	ENSPFOG00000003590	utp23	96	94.355	Poecilia_formosa
ENSGAFG00000002063	utp23	95	95.161	ENSPLAG00000017925	utp23	96	95.161	Poecilia_latipinna
ENSGAFG00000002063	utp23	95	95.161	ENSPMEG00000006728	utp23	96	95.161	Poecilia_mexicana
ENSGAFG00000002063	utp23	95	93.952	ENSPREG00000002478	utp23	96	93.548	Poecilia_reticulata
ENSGAFG00000002063	utp23	82	63.084	ENSPPYG00000018831	UTP23	84	62.201	Pongo_abelii
ENSGAFG00000002063	utp23	85	60.987	ENSPCAG00000009093	UTP23	90	60.619	Procavia_capensis
ENSGAFG00000002063	utp23	80	63.636	ENSPVAG00000002661	UTP23	83	61.722	Pteropus_vampyrus
ENSGAFG00000002063	utp23	87	91.667	ENSPNYG00000017636	utp23	89	91.228	Pundamilia_nyererei
ENSGAFG00000002063	utp23	79	75.728	ENSPNAG00000024538	utp23	86	74.762	Pygocentrus_nattereri
ENSGAFG00000002063	utp23	80	60.287	ENSRNOG00000004387	Utp23	84	60.287	Rattus_norvegicus
ENSGAFG00000002063	utp23	82	62.617	ENSRBIG00000026267	UTP23	84	61.722	Rhinopithecus_bieti
ENSGAFG00000002063	utp23	82	62.617	ENSRROG00000028593	UTP23	84	61.722	Rhinopithecus_roxellana
ENSGAFG00000002063	utp23	79	30.476	YOR004W	-	81	30.476	Saccharomyces_cerevisiae
ENSGAFG00000002063	utp23	80	62.201	ENSSBOG00000018914	UTP23	84	62.201	Saimiri_boliviensis_boliviensis
ENSGAFG00000002063	utp23	58	58.940	ENSSHAG00000015399	UTP23	75	56.757	Sarcophilus_harrisii
ENSGAFG00000002063	utp23	85	77.928	ENSSFOG00015009226	utp23	96	77.928	Scleropages_formosus
ENSGAFG00000002063	utp23	95	85.081	ENSSMAG00000020390	utp23	96	85.081	Scophthalmus_maximus
ENSGAFG00000002063	utp23	52	30.216	ENSSMAG00000005119	fcf1	69	30.435	Scophthalmus_maximus
ENSGAFG00000002063	utp23	93	88.066	ENSSDUG00000020272	utp23	95	89.177	Seriola_dumerili
ENSGAFG00000002063	utp23	93	87.654	ENSSLDG00000000393	utp23	95	88.745	Seriola_lalandi_dorsalis
ENSGAFG00000002063	utp23	82	68.692	ENSSPUG00000011572	UTP23	91	66.372	Sphenodon_punctatus
ENSGAFG00000002063	utp23	95	82.731	ENSSPAG00000013890	utp23	99	82.329	Stegastes_partitus
ENSGAFG00000002063	utp23	85	61.435	ENSSSCG00000030493	UTP23	90	61.504	Sus_scrofa
ENSGAFG00000002063	utp23	80	59.809	ENSTGUG00000015403	-	94	58.108	Taeniopygia_guttata
ENSGAFG00000002063	utp23	80	60.766	ENSTGUG00000012316	-	90	58.407	Taeniopygia_guttata
ENSGAFG00000002063	utp23	92	78.601	ENSTRUG00000023365	utp23	89	79.386	Takifugu_rubripes
ENSGAFG00000002063	utp23	79	60.976	ENSTBEG00000008655	UTP23	83	60.976	Tupaia_belangeri
ENSGAFG00000002063	utp23	83	62.673	ENSTTRG00000015295	UTP23	91	61.062	Tursiops_truncatus
ENSGAFG00000002063	utp23	80	62.201	ENSUMAG00000020439	UTP23	91	60.619	Ursus_maritimus
ENSGAFG00000002063	utp23	82	62.150	ENSVPAG00000009358	UTP23	91	59.735	Vicugna_pacos
ENSGAFG00000002063	utp23	80	63.636	ENSVVUG00000015307	UTP23	91	61.947	Vulpes_vulpes
ENSGAFG00000002063	utp23	80	61.244	ENSXETG00000020781	utp23	84	63.636	Xenopus_tropicalis
ENSGAFG00000002063	utp23	96	96.800	ENSXCOG00000019504	utp23	97	96.800	Xiphophorus_couchianus
ENSGAFG00000002063	utp23	96	96.400	ENSXMAG00000014058	utp23	97	96.400	Xiphophorus_maculatus