EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000002141 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 9160 bases
Position: chrNHOQ01001491.1:485595-494754
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003126	MMR_HSR1	PF01926.23	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003163	-	3729	-	ENSGAFP00000003126	218 (aa)	-	UPI0004A46B5F

Gene Model

Click here to download ENSGAFG00000002141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000002141	rab42a	69	34.437	ENSGAFG00000021814	hrasb	85	33.537
ENSGAFG00000002141	rab42a	72	38.509	ENSGAFG00000000591	rab9a	73	38.509
ENSGAFG00000002141	rab42a	72	37.107	ENSGAFG00000020102	si:dkey-13a21.4	77	37.107
ENSGAFG00000002141	rab42a	86	31.053	ENSGAFG00000015135	rab36	71	31.053
ENSGAFG00000002141	rab42a	78	35.260	ENSGAFG00000000629	RAB29	83	35.260
ENSGAFG00000002141	rab42a	100	54.128	ENSGAFG00000006932	-	100	54.128
ENSGAFG00000002141	rab42a	74	34.337	ENSGAFG00000021688	-	79	34.337
ENSGAFG00000002141	rab42a	75	40.476	ENSGAFG00000018916	-	73	40.476
ENSGAFG00000002141	rab42a	76	41.212	ENSGAFG00000002790	rab18a	80	41.212
ENSGAFG00000002141	rab42a	76	35.057	ENSGAFG00000014541	rras2	82	35.057
ENSGAFG00000002141	rab42a	72	39.490	ENSGAFG00000019872	rab41	73	39.490
ENSGAFG00000002141	rab42a	76	42.424	ENSGAFG00000008560	rab18b	80	42.424
ENSGAFG00000002141	rab42a	79	41.860	ENSGAFG00000014787	-	85	41.860
ENSGAFG00000002141	rab42a	67	41.892	ENSGAFG00000021202	zgc:101559	63	41.892
ENSGAFG00000002141	rab42a	72	39.490	ENSGAFG00000006356	rab6a	75	39.490
ENSGAFG00000002141	rab42a	85	40.860	ENSGAFG00000016549	rab11a	86	40.860
ENSGAFG00000002141	rab42a	69	34.437	ENSGAFG00000021765	kras	98	31.937
ENSGAFG00000002141	rab42a	72	34.615	ENSGAFG00000007684	rab23	74	35.294
ENSGAFG00000002141	rab42a	74	31.707	ENSGAFG00000005188	rabl2	70	31.707
ENSGAFG00000002141	rab42a	74	34.337	ENSGAFG00000020476	RAB7A	79	34.337
ENSGAFG00000002141	rab42a	75	40.237	ENSGAFG00000015490	rab33a	62	40.116
ENSGAFG00000002141	rab42a	84	39.674	ENSGAFG00000019305	rab1ba	91	39.674
ENSGAFG00000002141	rab42a	85	41.361	ENSGAFG00000020309	rab30	83	45.000
ENSGAFG00000002141	rab42a	75	38.095	ENSGAFG00000004099	rab9b	74	38.095
ENSGAFG00000002141	rab42a	97	33.649	ENSGAFG00000017270	rab6ba	94	33.649
ENSGAFG00000002141	rab42a	86	46.277	ENSGAFG00000006846	rab2a	88	46.277
ENSGAFG00000002141	rab42a	83	40.556	ENSGAFG00000021724	rab25b	86	40.556
ENSGAFG00000002141	rab42a	84	40.984	ENSGAFG00000021725	rab11al	84	40.984
ENSGAFG00000002141	rab42a	67	44.595	ENSGAFG00000019659	rab33ba	61	44.595
ENSGAFG00000002141	rab42a	82	42.697	ENSGAFG00000001289	rab1ab	87	42.697
ENSGAFG00000002141	rab42a	96	36.449	ENSGAFG00000002756	rab15	96	36.449
ENSGAFG00000002141	rab42a	86	59.474	ENSGAFG00000008183	si:dkey-34d22.5	86	59.474
ENSGAFG00000002141	rab42a	75	38.415	ENSGAFG00000000884	rab5c	74	38.415
ENSGAFG00000002141	rab42a	85	41.935	ENSGAFG00000005679	rab11ba	84	41.935
ENSGAFG00000002141	rab42a	75	37.195	ENSGAFG00000003642	-	73	37.195
ENSGAFG00000002141	rab42a	79	45.349	ENSGAFG00000005388	si:dkey-16l2.16	81	45.349
ENSGAFG00000002141	rab42a	77	42.857	ENSGAFG00000011713	rab25a	90	42.105
ENSGAFG00000002141	rab42a	88	35.938	ENSGAFG00000005477	rab4a	89	35.938
ENSGAFG00000002141	rab42a	83	32.967	ENSGAFG00000020906	rheb	93	32.967
ENSGAFG00000002141	rab42a	100	55.505	ENSGAFG00000004604	RAB39B	100	55.505
ENSGAFG00000002141	rab42a	75	36.585	ENSGAFG00000011619	rab5aa	75	36.585
ENSGAFG00000002141	rab42a	69	37.500	ENSGAFG00000018295	si:ch73-116o1.2	78	37.195
ENSGAFG00000002141	rab42a	76	45.455	ENSGAFG00000015702	zgc:171927	65	45.455
ENSGAFG00000002141	rab42a	74	40.491	ENSGAFG00000014730	-	80	40.491
ENSGAFG00000002141	rab42a	85	41.398	ENSGAFG00000007102	rab11bb	84	41.398
ENSGAFG00000002141	rab42a	72	38.854	ENSGAFG00000010916	rab6bb	75	38.854
ENSGAFG00000002141	rab42a	67	42.105	ENSGAFG00000015249	-	63	42.105
ENSGAFG00000002141	rab42a	78	33.529	ENSGAFG00000010541	rras	85	33.529
ENSGAFG00000002141	rab42a	77	31.737	ENSGAFG00000021738	rhebl1	88	31.737
ENSGAFG00000002141	rab42a	75	34.756	ENSGAFG00000001301	rab22a	84	34.756
ENSGAFG00000002141	rab42a	87	31.795	ENSGAFG00000012579	rab34a	73	31.795
ENSGAFG00000002141	rab42a	82	43.258	ENSGAFG00000000918	-	87	43.258
ENSGAFG00000002141	rab42a	76	40.000	ENSGAFG00000017305	RAB15	87	41.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002141	rab42a	100	94.954	ENSAPOG00000009188	rab42a	100	94.954	Acanthochromis_polyacanthus
ENSGAFG00000002141	rab42a	100	94.954	ENSACIG00000003102	rab42a	100	94.954	Amphilophus_citrinellus
ENSGAFG00000002141	rab42a	100	95.872	ENSAOCG00000012921	rab42a	83	95.872	Amphiprion_ocellaris
ENSGAFG00000002141	rab42a	100	95.872	ENSAPEG00000007713	rab42a	83	95.872	Amphiprion_percula
ENSGAFG00000002141	rab42a	100	93.119	ENSATEG00000009052	rab42a	100	93.119	Anabas_testudineus
ENSGAFG00000002141	rab42a	100	94.037	ENSACLG00000007514	rab42a	100	94.037	Astatotilapia_calliptera
ENSGAFG00000002141	rab42a	100	88.532	ENSAMXG00000032729	rab42a	100	88.532	Astyanax_mexicanus
ENSGAFG00000002141	rab42a	100	92.661	ENSCSEG00000010582	rab42a	100	92.661	Cynoglossus_semilaevis
ENSGAFG00000002141	rab42a	100	89.908	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSGAFG00000002141	rab42a	90	49.239	ENSDARG00000102580	CU571310.1	93	49.239	Danio_rerio
ENSGAFG00000002141	rab42a	100	88.532	ENSELUG00000010345	rab42a	100	88.532	Esox_lucius
ENSGAFG00000002141	rab42a	100	98.165	ENSFHEG00000013106	rab42a	100	98.165	Fundulus_heteroclitus
ENSGAFG00000002141	rab42a	100	94.037	ENSHBUG00000015126	rab42a	82	94.037	Haplochromis_burtoni
ENSGAFG00000002141	rab42a	100	85.321	ENSIPUG00000011376	rab42a	100	85.321	Ictalurus_punctatus
ENSGAFG00000002141	rab42a	100	96.330	ENSKMAG00000007267	rab42a	100	96.330	Kryptolebias_marmoratus
ENSGAFG00000002141	rab42a	100	95.413	ENSLBEG00000001193	rab42a	100	95.413	Labrus_bergylta
ENSGAFG00000002141	rab42a	100	64.679	ENSLACG00000012755	-	100	64.679	Latimeria_chalumnae
ENSGAFG00000002141	rab42a	100	80.734	ENSLOCG00000003453	rab42a	100	80.734	Lepisosteus_oculatus
ENSGAFG00000002141	rab42a	100	49.772	ENSLOCG00000015825	-	99	49.772	Lepisosteus_oculatus
ENSGAFG00000002141	rab42a	100	95.872	ENSMAMG00000002296	rab42a	100	95.872	Mastacembelus_armatus
ENSGAFG00000002141	rab42a	100	94.037	ENSMZEG00005012460	rab42a	82	94.037	Maylandia_zebra
ENSGAFG00000002141	rab42a	100	91.743	ENSMMOG00000014358	rab42a	100	91.743	Mola_mola
ENSGAFG00000002141	rab42a	100	94.495	ENSNBRG00000021487	rab42a	82	94.495	Neolamprologus_brichardi
ENSGAFG00000002141	rab42a	100	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSGAFG00000002141	rab42a	100	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSGAFG00000002141	rab42a	100	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSGAFG00000002141	rab42a	100	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSGAFG00000002141	rab42a	89	47.938	ENSPKIG00000015234	-	93	47.938	Paramormyrops_kingsleyae
ENSGAFG00000002141	rab42a	100	76.712	ENSPKIG00000021215	-	100	76.712	Paramormyrops_kingsleyae
ENSGAFG00000002141	rab42a	90	95.939	ENSPMGG00000024112	rab42a	90	95.939	Periophthalmus_magnuspinnatus
ENSGAFG00000002141	rab42a	100	99.083	ENSPFOG00000004838	rab42a	82	99.083	Poecilia_formosa
ENSGAFG00000002141	rab42a	100	99.541	ENSPLAG00000005628	rab42a	100	99.541	Poecilia_latipinna
ENSGAFG00000002141	rab42a	100	99.083	ENSPMEG00000019497	rab42a	100	99.083	Poecilia_mexicana
ENSGAFG00000002141	rab42a	100	100.000	ENSPREG00000013962	rab42a	100	100.000	Poecilia_reticulata
ENSGAFG00000002141	rab42a	100	94.037	ENSPNYG00000010325	rab42a	82	94.037	Pundamilia_nyererei
ENSGAFG00000002141	rab42a	100	88.073	ENSPNAG00000016567	rab42a	100	88.073	Pygocentrus_nattereri
ENSGAFG00000002141	rab42a	100	83.486	ENSSFOG00015020732	rab42a	100	83.486	Scleropages_formosus
ENSGAFG00000002141	rab42a	100	45.662	ENSSFOG00015016000	-	97	45.662	Scleropages_formosus
ENSGAFG00000002141	rab42a	100	93.578	ENSSMAG00000020311	rab42a	100	93.578	Scophthalmus_maximus
ENSGAFG00000002141	rab42a	100	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSGAFG00000002141	rab42a	100	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSGAFG00000002141	rab42a	100	95.872	ENSSPAG00000016167	rab42a	100	95.872	Stegastes_partitus
ENSGAFG00000002141	rab42a	100	94.954	ENSTRUG00000010224	rab42a	100	94.954	Takifugu_rubripes
ENSGAFG00000002141	rab42a	100	99.541	ENSXCOG00000003428	rab42a	100	99.541	Xiphophorus_couchianus
ENSGAFG00000002141	rab42a	100	99.541	ENSXMAG00000028376	rab42a	100	99.541	Xiphophorus_maculatus