EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000002177 (Gene tree)
Gene ID: -
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine/arginine-rich splicing factor 7a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7907 bases
Position: chrNHOQ01001250.1:33630-41536
Accession: ZDB-GENE-040426-1798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003184	RRM_1	PF00076.22	1.1e-15	1	1
ENSGAFP00000003200	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003221	-	1772	-	ENSGAFP00000003184	243 (aa)	-	-
ENSGAFT00000003238	-	998	-	ENSGAFP00000003200	257 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002177	srsf7a	60	53.378	ENSACIG00000016419	-	56	74.118	Amphilophus_citrinellus
ENSGAFG00000002177	srsf7a	89	65.000	ENSAMXG00000007005	srsf7b	54	75.221	Astyanax_mexicanus
ENSGAFG00000002177	srsf7a	50	58.400	ENSCAFG00020013547	-	69	59.459	Canis_lupus_dingo
ENSGAFG00000002177	srsf7a	65	50.943	ENSCSAG00000010291	SRSF3	52	74.118	Chlorocebus_sabaeus
ENSGAFG00000002177	srsf7a	64	51.875	ENSCSAVG00000007369	-	68	50.820	Ciona_savignyi
ENSGAFG00000002177	srsf7a	56	92.701	ENSCSEG00000006378	srsf7a	79	98.198	Cynoglossus_semilaevis
ENSGAFG00000002177	srsf7a	62	49.342	ENSCSEG00000002271	srsf3b	72	68.421	Cynoglossus_semilaevis
ENSGAFG00000002177	srsf7a	51	96.748	ENSCVAG00000020083	srsf7a	100	92.664	Cyprinodon_variegatus
ENSGAFG00000002177	srsf7a	55	56.296	ENSCVAG00000009865	-	56	74.118	Cyprinodon_variegatus
ENSGAFG00000002177	srsf7a	60	67.568	ENSDARG00000101057	srsf7b	73	75.676	Danio_rerio
ENSGAFG00000002177	srsf7a	94	74.894	ENSDARG00000035325	srsf7a	85	93.548	Danio_rerio
ENSGAFG00000002177	srsf7a	63	52.469	ENSEBUG00000002677	-	56	67.442	Eptatretus_burgeri
ENSGAFG00000002177	srsf7a	86	59.193	ENSELUG00000018155	srsf7b	80	76.577	Esox_lucius
ENSGAFG00000002177	srsf7a	88	67.094	ENSFHEG00000007159	srsf7a	66	100.000	Fundulus_heteroclitus
ENSGAFG00000002177	srsf7a	100	79.268	ENSGMOG00000002004	srsf7a	53	94.309	Gadus_morhua
ENSGAFG00000002177	srsf7a	67	69.880	ENSGALG00000033120	SRSF7	82	79.279	Gallus_gallus
ENSGAFG00000002177	srsf7a	60	51.351	ENSHCOG00000017795	-	51	70.588	Hippocampus_comes
ENSGAFG00000002177	srsf7a	57	57.857	ENSJJAG00000020230	-	68	63.063	Jaculus_jaculus
ENSGAFG00000002177	srsf7a	65	44.025	ENSLBEG00000013364	srsf3b	73	72.941	Labrus_bergylta
ENSGAFG00000002177	srsf7a	70	69.006	ENSLACG00000018688	srsf7a	54	87.500	Latimeria_chalumnae
ENSGAFG00000002177	srsf7a	58	61.806	ENSMAUG00000021932	-	54	63.303	Mesocricetus_auratus
ENSGAFG00000002177	srsf7a	71	45.665	ENSMAUG00000011430	-	55	59.524	Mesocricetus_auratus
ENSGAFG00000002177	srsf7a	62	50.331	ENSMOCG00000014206	-	87	47.682	Microtus_ochrogaster
ENSGAFG00000002177	srsf7a	51	94.400	ENSMMOG00000005208	srsf7a	74	97.297	Mola_mola
ENSGAFG00000002177	srsf7a	95	79.184	ENSMALG00000012722	srsf7a	95	89.388	Monopterus_albus
ENSGAFG00000002177	srsf7a	65	52.201	ENSMLUG00000010671	-	52	74.118	Myotis_lucifugus
ENSGAFG00000002177	srsf7a	67	96.914	ENSNBRG00000006601	srsf7a	73	98.198	Neolamprologus_brichardi
ENSGAFG00000002177	srsf7a	64	53.614	ENSORLG00015004309	srsf3b	51	74.118	Oryzias_latipes_hsok
ENSGAFG00000002177	srsf7a	62	49.342	ENSOMEG00000014893	srsf3b	64	69.072	Oryzias_melastigma
ENSGAFG00000002177	srsf7a	54	72.388	ENSPKIG00000017425	srsf7b	63	78.378	Paramormyrops_kingsleyae
ENSGAFG00000002177	srsf7a	50	67.480	ENSPMAG00000004472	srsf7a	54	72.642	Petromyzon_marinus
ENSGAFG00000002177	srsf7a	65	67.925	ENSPCIG00000020694	-	81	78.378	Phascolarctos_cinereus
ENSGAFG00000002177	srsf7a	100	98.833	ENSPFOG00000017803	srsf7a	100	98.833	Poecilia_formosa
ENSGAFG00000002177	srsf7a	100	99.177	ENSPLAG00000004839	srsf7a	100	99.177	Poecilia_latipinna
ENSGAFG00000002177	srsf7a	100	98.833	ENSPMEG00000002757	srsf7a	100	98.833	Poecilia_mexicana
ENSGAFG00000002177	srsf7a	52	99.206	ENSPREG00000020685	srsf7a	99	99.206	Poecilia_reticulata
ENSGAFG00000002177	srsf7a	65	52.830	ENSPNAG00000012262	srsf3a	68	74.419	Pygocentrus_nattereri
ENSGAFG00000002177	srsf7a	66	62.346	ENSRNOG00000008398	AABR07055789.1	67	68.468	Rattus_norvegicus
ENSGAFG00000002177	srsf7a	62	53.289	ENSSMAG00000000387	srsf3b	60	69.072	Scophthalmus_maximus
ENSGAFG00000002177	srsf7a	95	80.972	ENSSMAG00000019286	srsf7a	94	83.401	Scophthalmus_maximus
ENSGAFG00000002177	srsf7a	50	72.581	ENSSDUG00000021338	srsf7b	78	75.676	Seriola_dumerili
ENSGAFG00000002177	srsf7a	79	55.155	ENSSPAG00000017204	srsf7b	79	76.577	Stegastes_partitus
ENSGAFG00000002177	srsf7a	53	96.094	ENSSPAG00000022192	srsf7a	93	96.094	Stegastes_partitus
ENSGAFG00000002177	srsf7a	59	53.691	ENSVVUG00000006092	-	69	65.278	Vulpes_vulpes
ENSGAFG00000002177	srsf7a	52	97.619	ENSXCOG00000009381	srsf7a	99	97.619	Xiphophorus_couchianus
ENSGAFG00000002177	srsf7a	100	98.444	ENSXMAG00000003050	srsf7a	100	98.444	Xiphophorus_maculatus