EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000002181 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11011 bases
Position: chrNHOQ01002371.1:4010740-4021750
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003267	Suf	PF05843.14	1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003308	-	2767	-	ENSGAFP00000003267	716 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002181	cstf3	100	90.669	ENSG00000176102	CSTF3	100	90.669	Homo_sapiens
ENSGAFG00000002181	cstf3	100	97.067	ENSAPOG00000014054	cstf3	100	97.067	Acanthochromis_polyacanthus
ENSGAFG00000002181	cstf3	99	91.102	ENSAMEG00000007187	CSTF3	98	91.102	Ailuropoda_melanoleuca
ENSGAFG00000002181	cstf3	87	91.974	ENSACIG00000005539	cstf3	100	91.974	Amphilophus_citrinellus
ENSGAFG00000002181	cstf3	100	96.927	ENSAOCG00000010930	cstf3	100	96.927	Amphiprion_ocellaris
ENSGAFG00000002181	cstf3	100	96.927	ENSAPEG00000007903	cstf3	100	96.927	Amphiprion_percula
ENSGAFG00000002181	cstf3	100	96.788	ENSATEG00000000190	cstf3	100	96.788	Anabas_testudineus
ENSGAFG00000002181	cstf3	99	91.243	ENSAPLG00000007217	CSTF3	100	91.243	Anas_platyrhynchos
ENSGAFG00000002181	cstf3	100	90.947	ENSACAG00000002823	CSTF3	100	90.947	Anolis_carolinensis
ENSGAFG00000002181	cstf3	100	90.669	ENSANAG00000020699	CSTF3	100	90.720	Aotus_nancymaae
ENSGAFG00000002181	cstf3	100	96.648	ENSACLG00000007820	cstf3	100	96.648	Astatotilapia_calliptera
ENSGAFG00000002181	cstf3	100	91.643	ENSAMXG00000014198	cstf3	100	91.922	Astyanax_mexicanus
ENSGAFG00000002181	cstf3	100	90.669	ENSBTAG00000008617	CSTF3	100	90.950	Bos_taurus
ENSGAFG00000002181	cstf3	97	47.619	WBGene00006307	suf-1	99	47.619	Caenorhabditis_elegans
ENSGAFG00000002181	cstf3	100	90.669	ENSCJAG00000005533	CSTF3	100	90.720	Callithrix_jacchus
ENSGAFG00000002181	cstf3	100	90.669	ENSCAFG00000007264	CSTF3	100	90.669	Canis_familiaris
ENSGAFG00000002181	cstf3	99	91.243	ENSCAFG00020002715	CSTF3	98	91.243	Canis_lupus_dingo
ENSGAFG00000002181	cstf3	98	89.758	ENSCHIG00000016418	CSTF3	100	90.720	Capra_hircus
ENSGAFG00000002181	cstf3	99	91.525	ENSTSYG00000000451	CSTF3	99	96.214	Carlito_syrichta
ENSGAFG00000002181	cstf3	83	88.389	ENSCAPG00000010958	CSTF3	98	88.389	Cavia_aperea
ENSGAFG00000002181	cstf3	100	90.808	ENSCPOG00000005545	CSTF3	100	90.808	Cavia_porcellus
ENSGAFG00000002181	cstf3	100	90.669	ENSCCAG00000024790	CSTF3	96	96.214	Cebus_capucinus
ENSGAFG00000002181	cstf3	100	90.669	ENSCATG00000007080	CSTF3	100	90.720	Cercocebus_atys
ENSGAFG00000002181	cstf3	100	90.669	ENSCLAG00000016179	CSTF3	100	90.669	Chinchilla_lanigera
ENSGAFG00000002181	cstf3	78	96.617	ENSCHOG00000002497	CSTF3	79	96.617	Choloepus_hoffmanni
ENSGAFG00000002181	cstf3	100	90.669	ENSCPBG00000006753	CSTF3	100	90.669	Chrysemys_picta_bellii
ENSGAFG00000002181	cstf3	99	61.720	ENSCING00000006401	-	99	61.859	Ciona_intestinalis
ENSGAFG00000002181	cstf3	98	61.322	ENSCSAVG00000004851	-	100	61.322	Ciona_savignyi
ENSGAFG00000002181	cstf3	100	90.669	ENSCANG00000035468	CSTF3	100	90.720	Colobus_angolensis_palliatus
ENSGAFG00000002181	cstf3	100	90.529	ENSCGRG00001014773	Cstf3	100	90.529	Cricetulus_griseus_chok1gshd
ENSGAFG00000002181	cstf3	100	90.529	ENSCGRG00000004142	Cstf3	100	90.529	Cricetulus_griseus_crigri
ENSGAFG00000002181	cstf3	100	95.810	ENSCSEG00000014283	cstf3	100	95.810	Cynoglossus_semilaevis
ENSGAFG00000002181	cstf3	100	98.743	ENSCVAG00000019739	cstf3	100	98.743	Cyprinodon_variegatus
ENSGAFG00000002181	cstf3	100	93.863	ENSDARG00000018904	cstf3	100	93.863	Danio_rerio
ENSGAFG00000002181	cstf3	99	90.909	ENSDNOG00000007366	CSTF3	99	90.909	Dasypus_novemcinctus
ENSGAFG00000002181	cstf3	99	82.937	ENSDORG00000005898	Cstf3	100	82.937	Dipodomys_ordii
ENSGAFG00000002181	cstf3	99	56.088	FBgn0003559	su(f)	99	56.088	Drosophila_melanogaster
ENSGAFG00000002181	cstf3	89	85.514	ENSETEG00000017097	CSTF3	90	85.514	Echinops_telfairi
ENSGAFG00000002181	cstf3	84	73.798	ENSEBUG00000015459	cstf3	96	73.798	Eptatretus_burgeri
ENSGAFG00000002181	cstf3	99	89.831	ENSEASG00005019884	CSTF3	96	96.214	Equus_asinus_asinus
ENSGAFG00000002181	cstf3	99	89.831	ENSECAG00000023338	CSTF3	96	96.214	Equus_caballus
ENSGAFG00000002181	cstf3	100	85.794	ENSEEUG00000015167	CSTF3	100	85.794	Erinaceus_europaeus
ENSGAFG00000002181	cstf3	100	94.282	ENSELUG00000023393	cstf3	100	94.282	Esox_lucius
ENSGAFG00000002181	cstf3	100	90.808	ENSFCAG00000030711	CSTF3	100	90.808	Felis_catus
ENSGAFG00000002181	cstf3	93	93.072	ENSFALG00000010764	CSTF3	100	90.015	Ficedula_albicollis
ENSGAFG00000002181	cstf3	100	90.808	ENSFDAG00000012082	CSTF3	100	90.808	Fukomys_damarensis
ENSGAFG00000002181	cstf3	100	98.603	ENSFHEG00000020623	cstf3	100	98.603	Fundulus_heteroclitus
ENSGAFG00000002181	cstf3	100	93.454	ENSGMOG00000012275	cstf3	100	93.454	Gadus_morhua
ENSGAFG00000002181	cstf3	100	90.529	ENSGALG00000011685	CSTF3	100	90.529	Gallus_gallus
ENSGAFG00000002181	cstf3	100	95.670	ENSGACG00000015997	cstf3	100	95.670	Gasterosteus_aculeatus
ENSGAFG00000002181	cstf3	100	90.669	ENSGAGG00000006200	CSTF3	100	90.669	Gopherus_agassizii
ENSGAFG00000002181	cstf3	99	85.452	ENSGGOG00000026591	CSTF3	96	91.314	Gorilla_gorilla
ENSGAFG00000002181	cstf3	100	96.788	ENSHBUG00000016656	cstf3	100	96.788	Haplochromis_burtoni
ENSGAFG00000002181	cstf3	100	90.669	ENSHGLG00000017834	CSTF3	100	90.669	Heterocephalus_glaber_female
ENSGAFG00000002181	cstf3	100	90.669	ENSHGLG00100018042	CSTF3	100	90.669	Heterocephalus_glaber_male
ENSGAFG00000002181	cstf3	100	92.039	ENSHCOG00000015218	cstf3	100	92.039	Hippocampus_comes
ENSGAFG00000002181	cstf3	100	92.748	ENSIPUG00000013170	CSTF3	100	92.748	Ictalurus_punctatus
ENSGAFG00000002181	cstf3	100	90.669	ENSSTOG00000013306	CSTF3	100	90.669	Ictidomys_tridecemlineatus
ENSGAFG00000002181	cstf3	99	81.073	ENSJJAG00000018430	Cstf3	98	81.073	Jaculus_jaculus
ENSGAFG00000002181	cstf3	100	94.972	ENSKMAG00000010916	cstf3	100	94.972	Kryptolebias_marmoratus
ENSGAFG00000002181	cstf3	100	95.391	ENSLBEG00000002306	cstf3	100	95.391	Labrus_bergylta
ENSGAFG00000002181	cstf3	100	89.679	ENSLACG00000017296	CSTF3	100	89.679	Latimeria_chalumnae
ENSGAFG00000002181	cstf3	100	93.593	ENSLOCG00000004415	cstf3	100	93.593	Lepisosteus_oculatus
ENSGAFG00000002181	cstf3	100	90.529	ENSLAFG00000008712	CSTF3	100	90.529	Loxodonta_africana
ENSGAFG00000002181	cstf3	100	90.669	ENSMFAG00000029516	CSTF3	100	90.720	Macaca_fascicularis
ENSGAFG00000002181	cstf3	100	90.669	ENSMMUG00000002542	CSTF3	100	90.669	Macaca_mulatta
ENSGAFG00000002181	cstf3	100	90.669	ENSMNEG00000021807	CSTF3	100	90.720	Macaca_nemestrina
ENSGAFG00000002181	cstf3	100	90.669	ENSMLEG00000039594	CSTF3	97	93.987	Mandrillus_leucophaeus
ENSGAFG00000002181	cstf3	100	96.229	ENSMAMG00000020423	cstf3	100	96.229	Mastacembelus_armatus
ENSGAFG00000002181	cstf3	100	96.648	ENSMZEG00005012082	cstf3	100	96.648	Maylandia_zebra
ENSGAFG00000002181	cstf3	100	90.390	ENSMGAG00000001383	CSTF3	100	90.390	Meleagris_gallopavo
ENSGAFG00000002181	cstf3	100	90.390	ENSMAUG00000002487	Cstf3	100	90.390	Mesocricetus_auratus
ENSGAFG00000002181	cstf3	100	90.669	ENSMICG00000004784	CSTF3	100	90.720	Microcebus_murinus
ENSGAFG00000002181	cstf3	100	90.529	ENSMOCG00000017583	Cstf3	100	90.529	Microtus_ochrogaster
ENSGAFG00000002181	cstf3	99	96.045	ENSMMOG00000016026	cstf3	95	96.045	Mola_mola
ENSGAFG00000002181	cstf3	100	90.808	ENSMODG00000009745	-	100	90.808	Monodelphis_domestica
ENSGAFG00000002181	cstf3	100	80.223	ENSMODG00000025205	-	100	80.223	Monodelphis_domestica
ENSGAFG00000002181	cstf3	100	96.788	ENSMALG00000012050	cstf3	100	96.788	Monopterus_albus
ENSGAFG00000002181	cstf3	100	90.529	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.529	Mus_caroli
ENSGAFG00000002181	cstf3	100	90.529	ENSMUSG00000027176	Cstf3	100	90.529	Mus_musculus
ENSGAFG00000002181	cstf3	100	90.529	MGP_PahariEiJ_G0025464	Cstf3	100	90.529	Mus_pahari
ENSGAFG00000002181	cstf3	100	90.529	MGP_SPRETEiJ_G0024939	Cstf3	100	90.529	Mus_spretus
ENSGAFG00000002181	cstf3	100	90.529	ENSMPUG00000011457	CSTF3	100	90.529	Mustela_putorius_furo
ENSGAFG00000002181	cstf3	99	91.243	ENSMLUG00000003073	-	99	91.243	Myotis_lucifugus
ENSGAFG00000002181	cstf3	100	88.022	ENSMLUG00000026022	-	100	88.022	Myotis_lucifugus
ENSGAFG00000002181	cstf3	100	90.529	ENSNGAG00000010677	Cstf3	100	90.529	Nannospalax_galili
ENSGAFG00000002181	cstf3	87	96.790	ENSNBRG00000007345	cstf3	100	96.790	Neolamprologus_brichardi
ENSGAFG00000002181	cstf3	100	90.669	ENSNLEG00000017901	CSTF3	97	93.764	Nomascus_leucogenys
ENSGAFG00000002181	cstf3	73	90.057	ENSMEUG00000005640	-	100	90.057	Notamacropus_eugenii
ENSGAFG00000002181	cstf3	67	88.158	ENSOPRG00000000199	-	67	88.158	Ochotona_princeps
ENSGAFG00000002181	cstf3	89	79.245	ENSODEG00000006311	-	97	79.245	Octodon_degus
ENSGAFG00000002181	cstf3	100	90.669	ENSODEG00000016737	-	100	90.669	Octodon_degus
ENSGAFG00000002181	cstf3	100	96.648	ENSONIG00000005563	cstf3	100	96.648	Oreochromis_niloticus
ENSGAFG00000002181	cstf3	90	90.308	ENSOANG00000015140	CSTF3	100	90.308	Ornithorhynchus_anatinus
ENSGAFG00000002181	cstf3	100	90.390	ENSOCUG00000015417	CSTF3	100	90.390	Oryctolagus_cuniculus
ENSGAFG00000002181	cstf3	100	95.391	ENSORLG00000009762	cstf3	100	95.391	Oryzias_latipes
ENSGAFG00000002181	cstf3	100	95.391	ENSORLG00020005540	cstf3	100	95.391	Oryzias_latipes_hni
ENSGAFG00000002181	cstf3	100	95.251	ENSORLG00015003551	cstf3	100	95.251	Oryzias_latipes_hsok
ENSGAFG00000002181	cstf3	100	95.950	ENSOMEG00000003848	cstf3	100	95.950	Oryzias_melastigma
ENSGAFG00000002181	cstf3	100	90.291	ENSOGAG00000010229	CSTF3	100	90.291	Otolemur_garnettii
ENSGAFG00000002181	cstf3	90	90.824	ENSOARG00000017271	CSTF3	99	90.824	Ovis_aries
ENSGAFG00000002181	cstf3	99	87.853	ENSPPAG00000027358	CSTF3	99	87.853	Pan_paniscus
ENSGAFG00000002181	cstf3	100	90.808	ENSPPRG00000016852	CSTF3	100	90.808	Panthera_pardus
ENSGAFG00000002181	cstf3	100	90.808	ENSPTIG00000008716	CSTF3	100	90.808	Panthera_tigris_altaica
ENSGAFG00000002181	cstf3	100	90.669	ENSPTRG00000003485	CSTF3	100	90.669	Pan_troglodytes
ENSGAFG00000002181	cstf3	100	90.669	ENSPANG00000013722	CSTF3	97	93.987	Papio_anubis
ENSGAFG00000002181	cstf3	100	93.584	ENSPKIG00000023648	cstf3	100	93.584	Paramormyrops_kingsleyae
ENSGAFG00000002181	cstf3	100	90.669	ENSPSIG00000009173	CSTF3	100	90.669	Pelodiscus_sinensis
ENSGAFG00000002181	cstf3	77	96.898	ENSPMGG00000000164	cstf3	99	96.898	Periophthalmus_magnuspinnatus
ENSGAFG00000002181	cstf3	100	90.390	ENSPEMG00000011481	Cstf3	100	90.390	Peromyscus_maniculatus_bairdii
ENSGAFG00000002181	cstf3	99	79.155	ENSPMAG00000007282	cstf3	100	78.750	Petromyzon_marinus
ENSGAFG00000002181	cstf3	100	88.178	ENSPCIG00000026406	-	100	91.200	Phascolarctos_cinereus
ENSGAFG00000002181	cstf3	99	76.157	ENSPCIG00000030419	-	89	76.438	Phascolarctos_cinereus
ENSGAFG00000002181	cstf3	100	99.441	ENSPFOG00000017239	cstf3	100	99.441	Poecilia_formosa
ENSGAFG00000002181	cstf3	100	99.302	ENSPLAG00000009456	cstf3	100	99.302	Poecilia_latipinna
ENSGAFG00000002181	cstf3	100	99.441	ENSPMEG00000010320	cstf3	100	99.441	Poecilia_mexicana
ENSGAFG00000002181	cstf3	100	99.302	ENSPREG00000013549	cstf3	100	99.302	Poecilia_reticulata
ENSGAFG00000002181	cstf3	100	90.669	ENSPPYG00000003375	CSTF3	100	90.669	Pongo_abelii
ENSGAFG00000002181	cstf3	71	95.819	ENSPCAG00000008025	-	71	95.819	Procavia_capensis
ENSGAFG00000002181	cstf3	100	85.655	ENSPCOG00000014417	CSTF3	100	85.655	Propithecus_coquereli
ENSGAFG00000002181	cstf3	100	85.515	ENSPVAG00000002350	CSTF3	100	85.515	Pteropus_vampyrus
ENSGAFG00000002181	cstf3	100	96.788	ENSPNYG00000018259	cstf3	100	96.788	Pundamilia_nyererei
ENSGAFG00000002181	cstf3	100	93.863	ENSPNAG00000020182	cstf3	100	93.863	Pygocentrus_nattereri
ENSGAFG00000002181	cstf3	87	90.240	ENSRNOG00000012089	Cstf3	100	90.240	Rattus_norvegicus
ENSGAFG00000002181	cstf3	99	89.831	ENSRBIG00000044258	CSTF3	100	90.720	Rhinopithecus_bieti
ENSGAFG00000002181	cstf3	100	90.669	ENSRROG00000043450	CSTF3	100	90.720	Rhinopithecus_roxellana
ENSGAFG00000002181	cstf3	100	90.669	ENSSBOG00000024764	CSTF3	98	96.214	Saimiri_boliviensis_boliviensis
ENSGAFG00000002181	cstf3	100	81.337	ENSSHAG00000003135	-	99	81.337	Sarcophilus_harrisii
ENSGAFG00000002181	cstf3	99	90.909	ENSSHAG00000018128	-	99	90.909	Sarcophilus_harrisii
ENSGAFG00000002181	cstf3	100	93.863	ENSSFOG00015022133	cstf3	100	93.863	Scleropages_formosus
ENSGAFG00000002181	cstf3	100	95.950	ENSSMAG00000002197	cstf3	100	95.950	Scophthalmus_maximus
ENSGAFG00000002181	cstf3	100	96.927	ENSSDUG00000020426	cstf3	100	96.927	Seriola_dumerili
ENSGAFG00000002181	cstf3	100	96.927	ENSSLDG00000025649	cstf3	100	96.927	Seriola_lalandi_dorsalis
ENSGAFG00000002181	cstf3	100	90.529	ENSSARG00000000391	CSTF3	100	90.529	Sorex_araneus
ENSGAFG00000002181	cstf3	96	90.593	ENSSPUG00000010546	CSTF3	100	90.593	Sphenodon_punctatus
ENSGAFG00000002181	cstf3	100	96.927	ENSSPAG00000004958	cstf3	100	96.927	Stegastes_partitus
ENSGAFG00000002181	cstf3	99	90.463	ENSSSCG00000040954	CSTF3	99	90.463	Sus_scrofa
ENSGAFG00000002181	cstf3	99	90.819	ENSTGUG00000005010	CSTF3	100	90.819	Taeniopygia_guttata
ENSGAFG00000002181	cstf3	100	95.251	ENSTRUG00000004959	cstf3	100	95.251	Takifugu_rubripes
ENSGAFG00000002181	cstf3	99	96.469	ENSTNIG00000013811	cstf3	99	96.469	Tetraodon_nigroviridis
ENSGAFG00000002181	cstf3	89	88.318	ENSTBEG00000001544	CSTF3	90	88.318	Tupaia_belangeri
ENSGAFG00000002181	cstf3	100	87.883	ENSTTRG00000016366	CSTF3	100	87.883	Tursiops_truncatus
ENSGAFG00000002181	cstf3	99	90.960	ENSUMAG00000018971	CSTF3	100	90.400	Ursus_maritimus
ENSGAFG00000002181	cstf3	100	90.529	ENSVPAG00000007800	CSTF3	100	90.529	Vicugna_pacos
ENSGAFG00000002181	cstf3	99	91.243	ENSVVUG00000014938	CSTF3	100	90.720	Vulpes_vulpes
ENSGAFG00000002181	cstf3	66	42.116	ENSXETG00000017946	-	99	42.116	Xenopus_tropicalis
ENSGAFG00000002181	cstf3	88	75.312	ENSXETG00000021399	cstf3	100	76.375	Xenopus_tropicalis
ENSGAFG00000002181	cstf3	87	99.037	ENSXCOG00000011741	cstf3	100	99.037	Xiphophorus_couchianus
ENSGAFG00000002181	cstf3	100	99.441	ENSXMAG00000009545	cstf3	100	99.441	Xiphophorus_maculatus