EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000002396 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
56592 bases
Position
chrNHOQ01000607.1:295454-352045
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000003632ResIIIPF04851.156.9e-0811
ENSGAFP00000003548ResIIIPF04851.157e-0811
ENSGAFP00000003582ResIIIPF04851.157.1e-0811
ENSGAFP00000003505ResIIIPF04851.157.1e-0811
ENSGAFP00000003532ResIIIPF04851.157.1e-0811
ENSGAFP00000003541ResIIIPF04851.157.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000003587-9205-ENSGAFP000000035411488 (aa)--
ENSGAFT00000003628-9268-ENSGAFP000000035821467 (aa)--
ENSGAFT00000003678-4119-ENSGAFP000000036321372 (aa)--
ENSGAFT00000003578-9165-ENSGAFP000000035321488 (aa)--
ENSGAFT00000003551-9254-ENSGAFP000000035051488 (aa)--
ENSGAFT00000003594-9160-ENSGAFP000000035481457 (aa)--
Gene Model
Click here to download ENSGAFG00000002396's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002396's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000002396-9661.079ENSGAFG00000021535rad54l29161.472
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000002396-9259.463ENSG00000164080RAD54L28764.024Homo_sapiens
ENSGAFG00000002396-10080.632ENSAPOG00000024141-10080.094Acanthochromis_polyacanthus
ENSGAFG00000002396-9258.862ENSAMEG00000009326RAD54L28461.909Ailuropoda_melanoleuca
ENSGAFG00000002396-8663.763ENSACIG00000018079rad54l29162.966Amphilophus_citrinellus
ENSGAFG00000002396-9576.644ENSACIG00000015932-10075.684Amphilophus_citrinellus
ENSGAFG00000002396-9979.343ENSAOCG00000022380-9979.510Amphiprion_ocellaris
ENSGAFG00000002396-9977.996ENSATEG00000006641-9877.838Anabas_testudineus
ENSGAFG00000002396-9859.931ENSATEG00000009346rad54l29660.121Anabas_testudineus
ENSGAFG00000002396-9659.800ENSAPLG00000002121RAD54L29858.739Anas_platyrhynchos
ENSGAFG00000002396-8066.917ENSACAG00000015883RAD54L29563.287Anolis_carolinensis
ENSGAFG00000002396-9259.318ENSANAG00000025396RAD54L28461.672Aotus_nancymaae
ENSGAFG00000002396-9958.752ENSACLG00000019111rad54l29659.277Astatotilapia_calliptera
ENSGAFG00000002396-9978.644ENSACLG00000018296-9978.668Astatotilapia_calliptera
ENSGAFG00000002396-9560.670ENSAMXG00000013807rad54l29659.219Astyanax_mexicanus
ENSGAFG00000002396-8960.270ENSBTAG00000032253RAD54L28561.866Bos_taurus
ENSGAFG00000002396-5046.620WBGene00007761rad-265646.744Caenorhabditis_elegans
ENSGAFG00000002396-9259.681ENSCJAG00000005575RAD54L28462.066Callithrix_jacchus
ENSGAFG00000002396-8960.331ENSCAFG00000010120RAD54L28461.909Canis_familiaris
ENSGAFG00000002396-9258.790ENSCAFG00020022320RAD54L28461.909Canis_lupus_dingo
ENSGAFG00000002396-9258.722ENSCHIG00000008830RAD54L29158.537Capra_hircus
ENSGAFG00000002396-9259.188ENSTSYG00000013200RAD54L28461.415Carlito_syrichta
ENSGAFG00000002396-8264.153ENSCAPG00000016465RAD54L27964.143Cavia_aperea
ENSGAFG00000002396-9259.318ENSCPOG00000005941RAD54L28461.672Cavia_porcellus
ENSGAFG00000002396-8260.696ENSCCAG00000024465RAD54L28263.645Cebus_capucinus
ENSGAFG00000002396-9259.724ENSCATG00000039891RAD54L28562.115Cercocebus_atys
ENSGAFG00000002396-9259.377ENSCLAG00000008059RAD54L28462.074Chinchilla_lanigera
ENSGAFG00000002396-9259.739ENSCSAG00000014027RAD54L28462.126Chlorocebus_sabaeus
ENSGAFG00000002396-9758.930ENSCPBG00000016624RAD54L29859.202Chrysemys_picta_bellii
ENSGAFG00000002396-7050.337ENSCING00000009208-9550.000Ciona_intestinalis
ENSGAFG00000002396-9259.624ENSCANG00000036093RAD54L29457.084Colobus_angolensis_palliatus
ENSGAFG00000002396-9358.578ENSCGRG00000007921Rad54l29058.815Cricetulus_griseus_crigri
ENSGAFG00000002396-8775.254ENSCSEG00000006115-10073.596Cynoglossus_semilaevis
ENSGAFG00000002396-9957.046ENSCSEG00000001740rad54l29656.788Cynoglossus_semilaevis
ENSGAFG00000002396-10085.878ENSCVAG00000005376-10084.932Cyprinodon_variegatus
ENSGAFG00000002396-9660.402ENSCVAG00000017887rad54l29161.115Cyprinodon_variegatus
ENSGAFG00000002396-9662.009ENSDARG00000063031rad54l29760.366Danio_rerio
ENSGAFG00000002396-9457.797ENSDNOG00000017359RAD54L29657.924Dasypus_novemcinctus
ENSGAFG00000002396-8469.582ENSDORG00000000651Rad54l28269.582Dipodomys_ordii
ENSGAFG00000002396-6058.255FBgn0034976CG40496152.036Drosophila_melanogaster
ENSGAFG00000002396-9357.122ENSETEG00000013290RAD54L29658.032Echinops_telfairi
ENSGAFG00000002396-7853.162ENSEBUG00000001591rad54l28255.000Eptatretus_burgeri
ENSGAFG00000002396-9259.557ENSEASG00005012868RAD54L28461.897Equus_asinus_asinus
ENSGAFG00000002396-9259.557ENSECAG00000014759RAD54L28461.897Equus_caballus
ENSGAFG00000002396-7967.251ENSEEUG00000001759RAD54L27767.251Erinaceus_europaeus
ENSGAFG00000002396-9767.706ENSELUG00000011246RAD54L29767.622Esox_lucius
ENSGAFG00000002396-9258.790ENSFCAG00000018563RAD54L28461.830Felis_catus
ENSGAFG00000002396-8365.354ENSFALG00000008938RAD54L29563.178Ficedula_albicollis
ENSGAFG00000002396-9258.963ENSFDAG00000017084RAD54L28462.361Fukomys_damarensis
ENSGAFG00000002396-9660.517ENSFHEG00000023241rad54l29558.739Fundulus_heteroclitus
ENSGAFG00000002396-9987.603ENSFHEG00000017845-9887.775Fundulus_heteroclitus
ENSGAFG00000002396-9161.626ENSGMOG00000010674rad54l29263.855Gadus_morhua
ENSGAFG00000002396-9659.690ENSGALG00000003243RAD54L29758.017Gallus_gallus
ENSGAFG00000002396-8875.851ENSGACG00000005642-10075.464Gasterosteus_aculeatus
ENSGAFG00000002396-9660.303ENSGACG00000001558rad54l29760.087Gasterosteus_aculeatus
ENSGAFG00000002396-9360.496ENSGAGG00000020971RAD54L29660.663Gopherus_agassizii
ENSGAFG00000002396-9259.463ENSGGOG00000010032RAD54L28561.830Gorilla_gorilla
ENSGAFG00000002396-9958.660ENSHBUG00000012480rad54l29659.319Haplochromis_burtoni
ENSGAFG00000002396-9978.508ENSHBUG00000018930-9978.533Haplochromis_burtoni
ENSGAFG00000002396-9259.246ENSHGLG00000012116RAD54L28461.672Heterocephalus_glaber_female
ENSGAFG00000002396-9259.246ENSHGLG00100007205RAD54L28461.672Heterocephalus_glaber_male
ENSGAFG00000002396-9971.854ENSHCOG00000006741-9772.067Hippocampus_comes
ENSGAFG00000002396-9957.784ENSHCOG00000007601rad54l29357.510Hippocampus_comes
ENSGAFG00000002396-9060.608ENSIPUG00000019664rad54l28362.857Ictalurus_punctatus
ENSGAFG00000002396-9658.725ENSIPUG00000024973-8862.401Ictalurus_punctatus
ENSGAFG00000002396-9557.153ENSSTOG00000010014RAD54L29058.742Ictidomys_tridecemlineatus
ENSGAFG00000002396-9259.334ENSJJAG00000014332Rad54l28461.762Jaculus_jaculus
ENSGAFG00000002396-9957.971ENSKMAG00000001976rad54l29460.338Kryptolebias_marmoratus
ENSGAFG00000002396-9981.476ENSKMAG00000002931-9881.631Kryptolebias_marmoratus
ENSGAFG00000002396-8976.175ENSLBEG00000008534-9876.759Labrus_bergylta
ENSGAFG00000002396-9559.698ENSLBEG00000018779rad54l29658.350Labrus_bergylta
ENSGAFG00000002396-9656.477ENSLACG00000016004RAD54L29755.548Latimeria_chalumnae
ENSGAFG00000002396-7272.377ENSLOCG00000014222rad54l29971.549Lepisosteus_oculatus
ENSGAFG00000002396-9259.928ENSLAFG00000005966RAD54L29059.517Loxodonta_africana
ENSGAFG00000002396-9259.739ENSMFAG00000041836RAD54L28562.126Macaca_fascicularis
ENSGAFG00000002396-9259.753ENSMMUG00000012002RAD54L28462.145Macaca_mulatta
ENSGAFG00000002396-9259.739ENSMNEG00000035063RAD54L28662.126Macaca_nemestrina
ENSGAFG00000002396-9259.739ENSMLEG00000034668RAD54L28562.126Mandrillus_leucophaeus
ENSGAFG00000002396-9976.907ENSMAMG00000015321-9976.708Mastacembelus_armatus
ENSGAFG00000002396-9169.393ENSMAMG00000023761rad54l29665.894Mastacembelus_armatus
ENSGAFG00000002396-9958.656ENSMZEG00005012584rad54l29759.506Maylandia_zebra
ENSGAFG00000002396-9978.576ENSMZEG00005021308-9978.601Maylandia_zebra
ENSGAFG00000002396-9660.014ENSMGAG00000002911RAD54L29757.562Meleagris_gallopavo
ENSGAFG00000002396-7069.940ENSMAUG00000011651Rad54l29169.742Mesocricetus_auratus
ENSGAFG00000002396-9657.427ENSMICG00000002777RAD54L29058.944Microcebus_murinus
ENSGAFG00000002396-9259.450ENSMOCG00000022448Rad54l28561.890Microtus_ochrogaster
ENSGAFG00000002396-9459.957ENSMMOG00000021709rad54l29260.622Mola_mola
ENSGAFG00000002396-9474.741ENSMMOG00000016901-9874.618Mola_mola
ENSGAFG00000002396-9161.061ENSMODG00000011850RAD54L29461.099Monodelphis_domestica
ENSGAFG00000002396-8975.000ENSMALG00000015084-9781.647Monopterus_albus
ENSGAFG00000002396-9259.377MGP_CAROLIEiJ_G0032634Rad54l29756.142Mus_caroli
ENSGAFG00000002396-9259.377ENSMUSG00000040661Rad54l29756.342Mus_musculus
ENSGAFG00000002396-9259.088MGP_PahariEiJ_G0015502Rad54l29755.874Mus_pahari
ENSGAFG00000002396-9259.420MGP_SPRETEiJ_G0033779Rad54l29756.179Mus_spretus
ENSGAFG00000002396-9258.718ENSMPUG00000011865RAD54L28461.751Mustela_putorius_furo
ENSGAFG00000002396-9259.094ENSMLUG00000004605RAD54L29158.798Myotis_lucifugus
ENSGAFG00000002396-9259.768ENSNGAG00000015629Rad54l28462.156Nannospalax_galili
ENSGAFG00000002396-8564.776ENSNBRG00000001937rad54l28863.965Neolamprologus_brichardi
ENSGAFG00000002396-9978.508ENSNBRG00000022847-9978.533Neolamprologus_brichardi
ENSGAFG00000002396-9259.463ENSNLEG00000007038RAD54L28661.830Nomascus_leucogenys
ENSGAFG00000002396-9171.617ENSMEUG00000009835RAD54L29371.617Notamacropus_eugenii
ENSGAFG00000002396-9259.348ENSODEG00000018266RAD54L28461.702Octodon_degus
ENSGAFG00000002396-9959.444ENSONIG00000014468rad54l29759.590Oreochromis_niloticus
ENSGAFG00000002396-9678.896ENSONIG00000001663-9878.676Oreochromis_niloticus
ENSGAFG00000002396-9658.594ENSOANG00000012793RAD54L29460.724Ornithorhynchus_anatinus
ENSGAFG00000002396-9259.006ENSOCUG00000017577RAD54L29059.194Oryctolagus_cuniculus
ENSGAFG00000002396-9759.334ENSORLG00000002276rad54l29757.596Oryzias_latipes
ENSGAFG00000002396-9976.623ENSORLG00000002714-9876.475Oryzias_latipes
ENSGAFG00000002396-9976.418ENSORLG00020019256-9876.269Oryzias_latipes_hni
ENSGAFG00000002396-9959.040ENSORLG00020003470rad54l29757.845Oryzias_latipes_hni
ENSGAFG00000002396-9957.848ENSORLG00015021530rad54l29657.682Oryzias_latipes_hsok
ENSGAFG00000002396-9976.728ENSORLG00015013408-9976.696Oryzias_latipes_hsok
ENSGAFG00000002396-9975.186ENSOMEG00000008216-9974.239Oryzias_melastigma
ENSGAFG00000002396-9958.414ENSOMEG00000005597rad54l29558.062Oryzias_melastigma
ENSGAFG00000002396-7959.534ENSOGAG00000012442RAD54L28864.251Otolemur_garnettii
ENSGAFG00000002396-9258.777ENSOARG00000007264RAD54L29158.591Ovis_aries
ENSGAFG00000002396-9259.463ENSPPAG00000038472RAD54L29058.974Pan_paniscus
ENSGAFG00000002396-9258.790ENSPPRG00000010212RAD54L28461.830Panthera_pardus
ENSGAFG00000002396-9258.790ENSPTIG00000002240RAD54L28461.830Panthera_tigris_altaica
ENSGAFG00000002396-9259.463ENSPTRG00000014974RAD54L29058.974Pan_troglodytes
ENSGAFG00000002396-9259.739ENSPANG00000000857RAD54L28562.126Papio_anubis
ENSGAFG00000002396-10063.978ENSPKIG00000001065rad54l29865.084Paramormyrops_kingsleyae
ENSGAFG00000002396-7169.463ENSPSIG00000014346RAD54L29965.804Pelodiscus_sinensis
ENSGAFG00000002396-8962.261ENSPMGG00000002208rad54l29663.275Periophthalmus_magnuspinnatus
ENSGAFG00000002396-9767.338ENSPMGG00000000641-9767.714Periophthalmus_magnuspinnatus
ENSGAFG00000002396-9259.377ENSPEMG00000012051Rad54l28462.025Peromyscus_maniculatus_bairdii
ENSGAFG00000002396-9260.883ENSPCIG00000018143RAD54L29063.666Phascolarctos_cinereus
ENSGAFG00000002396-9660.832ENSPFOG00000018644rad54l29458.980Poecilia_formosa
ENSGAFG00000002396-9895.294ENSPFOG00000000197-9895.433Poecilia_formosa
ENSGAFG00000002396-9893.707ENSPLAG00000013908-9994.222Poecilia_latipinna
ENSGAFG00000002396-9661.488ENSPLAG00000006015rad54l29658.673Poecilia_latipinna
ENSGAFG00000002396-9660.904ENSPMEG00000021535rad54l29459.252Poecilia_mexicana
ENSGAFG00000002396-9895.017ENSPMEG00000009878-9994.626Poecilia_mexicana
ENSGAFG00000002396-9560.549ENSPREG00000008628rad54l29562.142Poecilia_reticulata
ENSGAFG00000002396-9894.810ENSPREG00000013377RAD54L210094.286Poecilia_reticulata
ENSGAFG00000002396-9258.862ENSPPYG00000013831RAD54L29558.566Pongo_abelii
ENSGAFG00000002396-7561.089ENSPCAG00000011952RAD54L28061.089Procavia_capensis
ENSGAFG00000002396-9657.356ENSPCOG00000015983RAD54L29058.845Propithecus_coquereli
ENSGAFG00000002396-9978.508ENSPNYG00000011435-9978.533Pundamilia_nyererei
ENSGAFG00000002396-8464.786ENSPNYG00000020693rad54l28864.303Pundamilia_nyererei
ENSGAFG00000002396-10062.803ENSPNAG00000011583-9764.561Pygocentrus_nattereri
ENSGAFG00000002396-9561.140ENSPNAG00000006451rad54l29660.488Pygocentrus_nattereri
ENSGAFG00000002396-9256.223ENSRNOG00000013570Rad54l29753.244Rattus_norvegicus
ENSGAFG00000002396-6868.394ENSRNOG00000049489LOC1025521669963.364Rattus_norvegicus
ENSGAFG00000002396-9259.624ENSRBIG00000032434RAD54L29561.193Rhinopithecus_bieti
ENSGAFG00000002396-9259.624ENSRROG00000042309RAD54L28661.998Rhinopithecus_roxellana
ENSGAFG00000002396-9259.318ENSSBOG00000002139RAD54L29058.974Saimiri_boliviensis_boliviensis
ENSGAFG00000002396-9659.437ENSSHAG00000008604RAD54L29857.856Sarcophilus_harrisii
ENSGAFG00000002396-10066.600ENSSFOG00015019014rad54l29866.828Scleropages_formosus
ENSGAFG00000002396-9659.393ENSSMAG00000020933rad54l29657.172Scophthalmus_maximus
ENSGAFG00000002396-9976.109ENSSMAG00000009978-9975.450Scophthalmus_maximus
ENSGAFG00000002396-9978.940ENSSDUG00000016711-9878.976Seriola_dumerili
ENSGAFG00000002396-9958.182ENSSDUG00000014268rad54l29658.906Seriola_dumerili
ENSGAFG00000002396-9560.043ENSSLDG00000023959rad54l29761.657Seriola_lalandi_dorsalis
ENSGAFG00000002396-9875.906ENSSLDG00000023388-9877.163Seriola_lalandi_dorsalis
ENSGAFG00000002396-9380.072ENSSPAG00000006371-9880.334Stegastes_partitus
ENSGAFG00000002396-9958.565ENSSPAG00000016532rad54l29759.407Stegastes_partitus
ENSGAFG00000002396-9657.305ENSSSCG00000011425RAD54L29058.862Sus_scrofa
ENSGAFG00000002396-9659.164ENSTGUG00000004888RAD54L29758.088Taeniopygia_guttata
ENSGAFG00000002396-9560.300ENSTRUG00000013962rad54l29758.514Takifugu_rubripes
ENSGAFG00000002396-9973.584ENSTRUG00000011066-9873.310Takifugu_rubripes
ENSGAFG00000002396-7675.899ENSTNIG00000006049-9975.719Tetraodon_nigroviridis
ENSGAFG00000002396-7469.412ENSTNIG00000014694rad54l29967.095Tetraodon_nigroviridis
ENSGAFG00000002396-8759.600ENSTBEG00000003377RAD54L28762.367Tupaia_belangeri
ENSGAFG00000002396-9258.991ENSUAMG00000020891RAD54L29457.560Ursus_americanus
ENSGAFG00000002396-9258.853ENSUMAG00000021678RAD54L27970.070Ursus_maritimus
ENSGAFG00000002396-8960.331ENSVVUG00000026874RAD54L28761.909Vulpes_vulpes
ENSGAFG00000002396-9658.554ENSXETG00000000070rad54l28763.557Xenopus_tropicalis
ENSGAFG00000002396-9657.902ENSXCOG00000004961rad54l28959.909Xiphophorus_couchianus
ENSGAFG00000002396-9692.639ENSXCOG00000002848-9892.788Xiphophorus_couchianus
ENSGAFG00000002396-9895.983ENSXMAG00000019370-9995.371Xiphophorus_maculatus
ENSGAFG00000002396-9561.522ENSXMAG00000017182rad54l29562.321Xiphophorus_maculatus

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