EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000002533 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4169 bases
Position: chrNHOQ01000739.1:662386-666554
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003734	PARP	PF00644.20	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003780	-	942	-	ENSGAFP00000003734	313 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000002533	-	97	46.231	ENSGAFG00000001814	-	85	38.318
ENSGAFG00000002533	-	63	40.609	ENSGAFG00000015867	-	71	40.609
ENSGAFG00000002533	-	97	43.478	ENSGAFG00000001802	-	65	43.478
ENSGAFG00000002533	-	66	30.357	ENSGAFG00000008847	PARP11	66	30.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002533	-	98	55.340	ENSAPOG00000007412	-	99	55.340	Acanthochromis_polyacanthus
ENSGAFG00000002533	-	97	40.000	ENSAPOG00000021642	-	65	40.000	Acanthochromis_polyacanthus
ENSGAFG00000002533	-	64	71.500	ENSACIG00000009927	-	97	71.500	Amphilophus_citrinellus
ENSGAFG00000002533	-	64	46.269	ENSACIG00000020176	-	72	46.269	Amphilophus_citrinellus
ENSGAFG00000002533	-	98	45.960	ENSACIG00000003944	si:ch211-219a4.3	84	40.994	Amphilophus_citrinellus
ENSGAFG00000002533	-	99	63.836	ENSACIG00000009912	-	100	63.836	Amphilophus_citrinellus
ENSGAFG00000002533	-	99	35.241	ENSAOCG00000017389	-	52	35.241	Amphiprion_ocellaris
ENSGAFG00000002533	-	62	60.606	ENSAOCG00000002975	-	58	60.606	Amphiprion_ocellaris
ENSGAFG00000002533	-	98	55.380	ENSAOCG00000002980	-	99	55.380	Amphiprion_ocellaris
ENSGAFG00000002533	-	98	64.677	ENSAPEG00000003728	-	54	64.677	Amphiprion_percula
ENSGAFG00000002533	-	97	47.236	ENSAPEG00000001687	-	65	39.308	Amphiprion_percula
ENSGAFG00000002533	-	99	66.500	ENSATEG00000002598	-	52	66.500	Anabas_testudineus
ENSGAFG00000002533	-	97	46.500	ENSACLG00000001129	-	64	38.217	Astatotilapia_calliptera
ENSGAFG00000002533	-	99	71.000	ENSACLG00000013116	-	52	71.000	Astatotilapia_calliptera
ENSGAFG00000002533	-	99	41.919	ENSACLG00000005418	-	96	39.241	Astatotilapia_calliptera
ENSGAFG00000002533	-	99	63.720	ENSACLG00000013093	-	100	63.720	Astatotilapia_calliptera
ENSGAFG00000002533	-	63	70.558	ENSACLG00000013170	-	90	70.558	Astatotilapia_calliptera
ENSGAFG00000002533	-	96	41.117	ENSCSEG00000017936	si:ch211-219a4.3	84	37.460	Cynoglossus_semilaevis
ENSGAFG00000002533	-	98	42.902	ENSCSEG00000020071	-	89	42.902	Cynoglossus_semilaevis
ENSGAFG00000002533	-	63	45.178	ENSCVAG00000017520	-	83	45.178	Cyprinodon_variegatus
ENSGAFG00000002533	-	99	68.690	ENSCVAG00000014329	-	98	68.690	Cyprinodon_variegatus
ENSGAFG00000002533	-	97	57.500	ENSDARG00000099377	si:cabz01030277.1	52	57.500	Danio_rerio
ENSGAFG00000002533	-	99	39.732	ENSEBUG00000002611	-	53	39.732	Eptatretus_burgeri
ENSGAFG00000002533	-	64	62.814	ENSFHEG00000008820	-	87	62.814	Fundulus_heteroclitus
ENSGAFG00000002533	-	97	44.776	ENSFHEG00000008557	-	50	44.776	Fundulus_heteroclitus
ENSGAFG00000002533	-	96	44.928	ENSGMOG00000011231	-	97	38.199	Gadus_morhua
ENSGAFG00000002533	-	96	44.162	ENSGACG00000002353	si:ch211-219a4.3	51	44.162	Gasterosteus_aculeatus
ENSGAFG00000002533	-	99	38.907	ENSHBUG00000005369	-	90	38.907	Haplochromis_burtoni
ENSGAFG00000002533	-	97	46.500	ENSHBUG00000018235	-	65	41.214	Haplochromis_burtoni
ENSGAFG00000002533	-	99	65.723	ENSKMAG00000003908	-	100	65.723	Kryptolebias_marmoratus
ENSGAFG00000002533	-	99	66.044	ENSKMAG00000012870	-	93	66.044	Kryptolebias_marmoratus
ENSGAFG00000002533	-	96	49.749	ENSLACG00000001018	-	51	49.749	Latimeria_chalumnae
ENSGAFG00000002533	-	63	42.211	ENSLACG00000009107	-	97	42.211	Latimeria_chalumnae
ENSGAFG00000002533	-	98	45.455	ENSMZEG00005025678	si:ch211-219a4.3	91	40.373	Maylandia_zebra
ENSGAFG00000002533	-	99	56.129	ENSMZEG00005026601	-	91	56.129	Maylandia_zebra
ENSGAFG00000002533	-	99	33.427	ENSMZEG00005025708	-	57	35.311	Maylandia_zebra
ENSGAFG00000002533	-	64	38.537	ENSMODG00000007157	-	63	38.537	Monodelphis_domestica
ENSGAFG00000002533	-	50	61.392	ENSMALG00000017146	-	77	61.392	Monopterus_albus
ENSGAFG00000002533	-	56	59.091	ENSMALG00000000434	-	86	59.091	Monopterus_albus
ENSGAFG00000002533	-	97	40.895	ENSNBRG00000005232	-	65	40.895	Neolamprologus_brichardi
ENSGAFG00000002533	-	61	70.157	ENSNBRG00000004048	-	100	70.157	Neolamprologus_brichardi
ENSGAFG00000002533	-	82	62.452	ENSNBRG00000004017	-	91	70.256	Neolamprologus_brichardi
ENSGAFG00000002533	-	82	66.279	ENSNBRG00000003877	-	88	66.279	Neolamprologus_brichardi
ENSGAFG00000002533	-	99	58.385	ENSONIG00000017776	-	94	58.385	Oreochromis_niloticus
ENSGAFG00000002533	-	96	44.162	ENSONIG00000004517	-	51	44.162	Oreochromis_niloticus
ENSGAFG00000002533	-	99	71.500	ENSORLG00000007845	-	65	71.500	Oryzias_latipes
ENSGAFG00000002533	-	97	43.939	ENSORLG00015021971	si:ch211-219a4.3	89	40.506	Oryzias_latipes_hsok
ENSGAFG00000002533	-	97	61.184	ENSORLG00015003387	-	84	61.184	Oryzias_latipes_hsok
ENSGAFG00000002533	-	98	45.455	ENSOMEG00000019715	si:ch211-219a4.3	90	41.824	Oryzias_melastigma
ENSGAFG00000002533	-	100	63.694	ENSOMEG00000016380	-	91	63.694	Oryzias_melastigma
ENSGAFG00000002533	-	64	65.327	ENSOMEG00000016408	-	60	65.327	Oryzias_melastigma
ENSGAFG00000002533	-	99	63.323	ENSOMEG00000016395	-	99	63.323	Oryzias_melastigma
ENSGAFG00000002533	-	99	58.861	ENSOMEG00000016369	-	92	58.861	Oryzias_melastigma
ENSGAFG00000002533	-	63	44.949	ENSPKIG00000004135	-	56	44.949	Paramormyrops_kingsleyae
ENSGAFG00000002533	-	98	37.690	ENSPMGG00000004482	-	88	37.690	Periophthalmus_magnuspinnatus
ENSGAFG00000002533	-	64	57.000	ENSPMGG00000017987	-	91	57.000	Periophthalmus_magnuspinnatus
ENSGAFG00000002533	-	63	48.223	ENSPFOG00000021893	-	51	48.223	Poecilia_formosa
ENSGAFG00000002533	-	85	75.277	ENSPLAG00000004362	-	95	75.277	Poecilia_latipinna
ENSGAFG00000002533	-	65	44.059	ENSPLAG00000023515	-	71	44.059	Poecilia_latipinna
ENSGAFG00000002533	-	65	44.554	ENSPMEG00000004356	-	71	44.554	Poecilia_mexicana
ENSGAFG00000002533	-	97	36.593	ENSPREG00000019242	-	83	36.593	Poecilia_reticulata
ENSGAFG00000002533	-	97	41.009	ENSPREG00000007470	-	99	41.009	Poecilia_reticulata
ENSGAFG00000002533	-	100	83.648	ENSPREG00000003560	-	98	83.648	Poecilia_reticulata
ENSGAFG00000002533	-	98	44.949	ENSPNYG00000013937	-	91	40.062	Pundamilia_nyererei
ENSGAFG00000002533	-	99	38.080	ENSPNYG00000001714	-	90	38.080	Pundamilia_nyererei
ENSGAFG00000002533	-	99	63.804	ENSPNYG00000021303	-	99	63.804	Pundamilia_nyererei
ENSGAFG00000002533	-	99	56.129	ENSPNYG00000021378	-	91	56.129	Pundamilia_nyererei
ENSGAFG00000002533	-	76	61.881	ENSPNAG00000020642	-	53	61.881	Pygocentrus_nattereri
ENSGAFG00000002533	-	96	50.000	ENSSFOG00015001605	-	72	48.165	Scleropages_formosus
ENSGAFG00000002533	-	97	44.062	ENSSFOG00015012828	-	80	44.062	Scleropages_formosus
ENSGAFG00000002533	-	98	71.500	ENSSDUG00000007576	-	53	71.500	Seriola_dumerili
ENSGAFG00000002533	-	97	47.264	ENSSDUG00000001575	-	78	38.006	Seriola_dumerili
ENSGAFG00000002533	-	97	46.231	ENSSLDG00000005702	-	63	32.888	Seriola_lalandi_dorsalis
ENSGAFG00000002533	-	64	71.000	ENSSLDG00000005960	-	55	71.000	Seriola_lalandi_dorsalis
ENSGAFG00000002533	-	96	40.796	ENSTRUG00000004579	-	89	38.854	Takifugu_rubripes
ENSGAFG00000002533	-	99	38.199	ENSUAMG00000004120	-	82	38.199	Ursus_americanus
ENSGAFG00000002533	-	63	46.500	ENSXETG00000010161	parp14.3	65	46.500	Xenopus_tropicalis
ENSGAFG00000002533	-	57	37.363	ENSXETG00000031130	-	89	37.363	Xenopus_tropicalis
ENSGAFG00000002533	-	50	45.513	ENSXCOG00000014714	-	71	45.513	Xiphophorus_couchianus
ENSGAFG00000002533	-	96	45.685	ENSXCOG00000014707	-	89	40.190	Xiphophorus_couchianus
ENSGAFG00000002533	-	97	37.500	ENSXCOG00000006581	-	89	37.500	Xiphophorus_couchianus
ENSGAFG00000002533	-	62	82.990	ENSXMAG00000010352	-	83	82.990	Xiphophorus_maculatus
ENSGAFG00000002533	-	99	91.045	ENSXMAG00000001866	-	53	91.045	Xiphophorus_maculatus