EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000002547 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7297 bases
Position: chrNHOQ01002357.1:5241745-5249041
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003746	MMR_HSR1	PF01926.23	1.1e-07	1	1
ENSGAFP00000003739	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003785	-	546	-	ENSGAFP00000003739	181 (aa)	-	-
ENSGAFT00000003792	-	2498	-	ENSGAFP00000003746	179 (aa)	-	UPI000DD1D555

Gene Model

Click here to download ENSGAFG00000002547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000002547	arl5c	64	30.081	ENSGAFG00000014730	-	59	30.081
ENSGAFG00000002547	arl5c	94	38.462	ENSGAFG00000006962	arfrp1	90	38.462
ENSGAFG00000002547	arl5c	62	30.973	ENSGAFG00000010938	arl8ba	52	30.973
ENSGAFG00000002547	arl5c	98	47.727	ENSGAFG00000021449	-	98	47.727
ENSGAFG00000002547	arl5c	85	37.500	ENSGAFG00000008601	arl3l2	71	37.500
ENSGAFG00000002547	arl5c	88	37.888	ENSGAFG00000012819	-	82	38.125
ENSGAFG00000002547	arl5c	51	33.696	ENSGAFG00000004846	-	78	33.333
ENSGAFG00000002547	arl5c	70	34.646	ENSGAFG00000017776	arl8a	74	34.646
ENSGAFG00000002547	arl5c	90	41.420	ENSGAFG00000020556	arl4cb	87	41.420
ENSGAFG00000002547	arl5c	98	47.458	ENSGAFG00000010799	arf2b	98	47.458
ENSGAFG00000002547	arl5c	62	33.613	ENSGAFG00000002790	rab18a	57	33.613
ENSGAFG00000002547	arl5c	100	45.000	ENSGAFG00000018703	arf5	100	45.000
ENSGAFG00000002547	arl5c	93	43.023	ENSGAFG00000014283	arl4aa	86	43.023
ENSGAFG00000002547	arl5c	93	42.169	ENSGAFG00000015025	arl2	93	40.936
ENSGAFG00000002547	arl5c	100	38.333	ENSGAFG00000005872	arl3	93	39.759
ENSGAFG00000002547	arl5c	90	40.120	ENSGAFG00000012473	arl4d	83	40.120
ENSGAFG00000002547	arl5c	80	42.759	ENSGAFG00000000058	arl11	91	42.759
ENSGAFG00000002547	arl5c	86	37.288	ENSGAFG00000011077	-	99	37.288
ENSGAFG00000002547	arl5c	98	49.432	ENSGAFG00000018151	-	98	49.432
ENSGAFG00000002547	arl5c	100	46.667	ENSGAFG00000009954	-	80	46.667
ENSGAFG00000002547	arl5c	92	46.386	ENSGAFG00000006973	arl1	99	46.386
ENSGAFG00000002547	arl5c	85	34.868	ENSGAFG00000010573	-	81	36.842
ENSGAFG00000002547	arl5c	97	36.517	ENSGAFG00000012355	ARL6	96	37.079
ENSGAFG00000002547	arl5c	100	70.391	ENSGAFG00000003465	arl5a	81	70.391
ENSGAFG00000002547	arl5c	66	30.159	ENSGAFG00000005477	rab4a	58	30.159
ENSGAFG00000002547	arl5c	62	45.536	ENSGAFG00000002801	-	99	45.536
ENSGAFG00000002547	arl5c	98	44.633	ENSGAFG00000005163	-	98	44.633
ENSGAFG00000002547	arl5c	100	46.667	ENSGAFG00000021727	arf3b	99	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002547	arl5c	100	88.827	ENSAPOG00000005821	arl5c	100	88.827	Acanthochromis_polyacanthus
ENSGAFG00000002547	arl5c	92	92.683	ENSACIG00000008975	arl5c	91	92.683	Amphilophus_citrinellus
ENSGAFG00000002547	arl5c	100	88.827	ENSAOCG00000010448	arl5c	100	88.827	Amphiprion_ocellaris
ENSGAFG00000002547	arl5c	100	88.827	ENSAPEG00000002699	arl5c	100	88.827	Amphiprion_percula
ENSGAFG00000002547	arl5c	99	89.266	ENSATEG00000000181	arl5c	99	89.266	Anabas_testudineus
ENSGAFG00000002547	arl5c	100	91.620	ENSACLG00000000922	arl5c	100	92.073	Astatotilapia_calliptera
ENSGAFG00000002547	arl5c	100	82.123	ENSAMXG00000031771	arl5c	100	82.123	Astyanax_mexicanus
ENSGAFG00000002547	arl5c	100	84.916	ENSCSEG00000009845	arl5c	100	84.916	Cynoglossus_semilaevis
ENSGAFG00000002547	arl5c	100	96.089	ENSCVAG00000012706	arl5c	100	96.089	Cyprinodon_variegatus
ENSGAFG00000002547	arl5c	100	81.564	ENSDARG00000035719	arl5c	100	81.564	Danio_rerio
ENSGAFG00000002547	arl5c	99	85.393	ENSELUG00000016864	arl5c	99	85.393	Esox_lucius
ENSGAFG00000002547	arl5c	99	96.610	ENSFHEG00000013677	arl5c	99	96.610	Fundulus_heteroclitus
ENSGAFG00000002547	arl5c	100	91.061	ENSGACG00000009321	arl5c	100	91.061	Gasterosteus_aculeatus
ENSGAFG00000002547	arl5c	100	91.620	ENSHBUG00000007301	arl5c	100	91.620	Haplochromis_burtoni
ENSGAFG00000002547	arl5c	99	84.831	ENSHCOG00000017576	-	99	84.831	Hippocampus_comes
ENSGAFG00000002547	arl5c	100	82.682	ENSIPUG00000023232	arl5c	100	82.682	Ictalurus_punctatus
ENSGAFG00000002547	arl5c	99	93.220	ENSKMAG00000011323	arl5c	99	93.220	Kryptolebias_marmoratus
ENSGAFG00000002547	arl5c	100	88.268	ENSLBEG00000006177	arl5c	86	88.268	Labrus_bergylta
ENSGAFG00000002547	arl5c	100	88.268	ENSMAMG00000022157	arl5c	100	88.268	Mastacembelus_armatus
ENSGAFG00000002547	arl5c	100	91.620	ENSMZEG00005022925	arl5c	100	91.620	Maylandia_zebra
ENSGAFG00000002547	arl5c	92	90.854	ENSMMOG00000020851	arl5c	96	90.854	Mola_mola
ENSGAFG00000002547	arl5c	92	90.244	ENSMALG00000009306	arl5c	93	90.854	Monopterus_albus
ENSGAFG00000002547	arl5c	100	92.179	ENSNBRG00000020245	arl5c	100	92.683	Neolamprologus_brichardi
ENSGAFG00000002547	arl5c	100	92.179	ENSONIG00000000890	arl5c	99	92.179	Oreochromis_niloticus
ENSGAFG00000002547	arl5c	100	84.916	ENSORLG00000002960	arl5c	100	85.976	Oryzias_latipes
ENSGAFG00000002547	arl5c	100	84.916	ENSORLG00020010074	arl5c	100	85.976	Oryzias_latipes_hni
ENSGAFG00000002547	arl5c	100	84.916	ENSORLG00015002752	arl5c	100	85.976	Oryzias_latipes_hsok
ENSGAFG00000002547	arl5c	97	85.549	ENSOMEG00000021718	arl5c	98	85.549	Oryzias_melastigma
ENSGAFG00000002547	arl5c	99	84.831	ENSPKIG00000021727	arl5c	99	84.831	Paramormyrops_kingsleyae
ENSGAFG00000002547	arl5c	100	97.207	ENSPFOG00000007842	arl5c	99	97.207	Poecilia_formosa
ENSGAFG00000002547	arl5c	100	96.648	ENSPLAG00000002394	arl5c	100	96.648	Poecilia_latipinna
ENSGAFG00000002547	arl5c	98	91.525	ENSPMEG00000000631	arl5c	94	97.546	Poecilia_mexicana
ENSGAFG00000002547	arl5c	100	97.765	ENSPREG00000008730	arl5c	100	97.765	Poecilia_reticulata
ENSGAFG00000002547	arl5c	100	91.620	ENSPNYG00000012720	arl5c	100	92.073	Pundamilia_nyererei
ENSGAFG00000002547	arl5c	100	81.564	ENSPNAG00000002310	arl5c	100	81.564	Pygocentrus_nattereri
ENSGAFG00000002547	arl5c	100	82.123	ENSSFOG00015023529	arl5c	100	82.123	Scleropages_formosus
ENSGAFG00000002547	arl5c	100	88.268	ENSSMAG00000010552	arl5c	100	88.268	Scophthalmus_maximus
ENSGAFG00000002547	arl5c	100	86.592	ENSSDUG00000022640	arl5c	100	86.592	Seriola_dumerili
ENSGAFG00000002547	arl5c	100	86.592	ENSSLDG00000000728	arl5c	100	86.592	Seriola_lalandi_dorsalis
ENSGAFG00000002547	arl5c	100	90.503	ENSSPAG00000007687	arl5c	100	90.503	Stegastes_partitus
ENSGAFG00000002547	arl5c	100	89.944	ENSTRUG00000022814	arl5c	100	89.944	Takifugu_rubripes
ENSGAFG00000002547	arl5c	99	89.888	ENSTNIG00000003015	arl5c	99	89.888	Tetraodon_nigroviridis
ENSGAFG00000002547	arl5c	100	98.324	ENSXCOG00000017380	arl5c	100	98.324	Xiphophorus_couchianus
ENSGAFG00000002547	arl5c	100	97.765	ENSXMAG00000008447	arl5c	100	97.765	Xiphophorus_maculatus