EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000002659 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 14639 bases
Position: chrNHOQ01001250.1:201398-216036
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	1	7
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	2	7
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	3	7
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	4	7
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	5	7
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	6	7
ENSGAFP00000003897	zf-C2H2	PF00096.26	4.1e-48	7	7
ENSGAFP00000003915	zf-C2H2	PF00096.26	4.1e-39	1	5
ENSGAFP00000003915	zf-C2H2	PF00096.26	4.1e-39	2	5
ENSGAFP00000003915	zf-C2H2	PF00096.26	4.1e-39	3	5
ENSGAFP00000003915	zf-C2H2	PF00096.26	4.1e-39	4	5
ENSGAFP00000003915	zf-C2H2	PF00096.26	4.1e-39	5	5
ENSGAFP00000003897	zf-met	PF12874.7	1e-15	1	4
ENSGAFP00000003897	zf-met	PF12874.7	1e-15	2	4
ENSGAFP00000003897	zf-met	PF12874.7	1e-15	3	4
ENSGAFP00000003897	zf-met	PF12874.7	1e-15	4	4
ENSGAFP00000003915	zf-met	PF12874.7	3.7e-13	1	3
ENSGAFP00000003915	zf-met	PF12874.7	3.7e-13	2	3
ENSGAFP00000003915	zf-met	PF12874.7	3.7e-13	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003945	-	3820	-	ENSGAFP00000003897	788 (aa)	-	-
ENSGAFT00000003995	-	3242	-	ENSGAFP00000003947	419 (aa)	-	-
ENSGAFT00000003983	-	378	-	ENSGAFP00000003936	125 (aa)	-	-
ENSGAFT00000003963	-	1734	-	ENSGAFP00000003915	577 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000002659	-	68	40.711	ENSGAFG00000008226	-	73	36.620
ENSGAFG00000002659	-	71	38.438	ENSGAFG00000014419	-	80	39.130
ENSGAFG00000002659	-	80	39.300	ENSGAFG00000014413	-	90	39.300
ENSGAFG00000002659	-	66	37.363	ENSGAFG00000014410	-	94	39.080
ENSGAFG00000002659	-	71	39.888	ENSGAFG00000011999	-	95	39.888
ENSGAFG00000002659	-	68	42.319	ENSGAFG00000007098	-	88	42.319
ENSGAFG00000002659	-	64	41.176	ENSGAFG00000013452	-	72	41.379
ENSGAFG00000002659	-	83	36.019	ENSGAFG00000007110	-	82	41.615
ENSGAFG00000002659	-	83	40.394	ENSGAFG00000012004	-	70	39.367
ENSGAFG00000002659	-	69	44.792	ENSGAFG00000011913	si:ch211-161m3.4	84	40.394
ENSGAFG00000002659	-	79	41.176	ENSGAFG00000019072	-	98	42.562
ENSGAFG00000002659	-	64	43.023	ENSGAFG00000014088	-	80	37.500
ENSGAFG00000002659	-	62	40.206	ENSGAFG00000013000	-	58	40.102
ENSGAFG00000002659	-	67	33.475	ENSGAFG00000021891	znf319b	82	34.483
ENSGAFG00000002659	-	65	40.606	ENSGAFG00000013471	-	79	40.606
ENSGAFG00000002659	-	67	37.652	ENSGAFG00000005321	zbtb47b	82	38.393
ENSGAFG00000002659	-	64	39.091	ENSGAFG00000013066	-	66	39.091
ENSGAFG00000002659	-	64	39.919	ENSGAFG00000013069	-	64	41.250
ENSGAFG00000002659	-	63	40.719	ENSGAFG00000012083	-	50	41.463
ENSGAFG00000002659	-	63	38.197	ENSGAFG00000013605	-	98	39.056
ENSGAFG00000002659	-	64	35.865	ENSGAFG00000012953	-	72	35.865
ENSGAFG00000002659	-	67	39.178	ENSGAFG00000021140	-	99	39.178
ENSGAFG00000002659	-	65	30.380	ENSGAFG00000020131	znf341	51	30.547
ENSGAFG00000002659	-	67	35.905	ENSGAFG00000018659	-	99	39.583
ENSGAFG00000002659	-	60	37.054	ENSGAFG00000013116	-	65	35.747
ENSGAFG00000002659	-	80	45.185	ENSGAFG00000001879	-	85	45.185
ENSGAFG00000002659	-	65	44.444	ENSGAFG00000011924	-	66	44.444
ENSGAFG00000002659	-	71	41.818	ENSGAFG00000003154	-	52	41.818
ENSGAFG00000002659	-	65	41.071	ENSGAFG00000003150	-	83	41.071
ENSGAFG00000002659	-	66	31.429	ENSGAFG00000008457	zbtb41	61	31.750
ENSGAFG00000002659	-	71	39.200	ENSGAFG00000013363	-	89	39.200
ENSGAFG00000002659	-	64	43.709	ENSGAFG00000008274	-	98	40.254
ENSGAFG00000002659	-	66	41.317	ENSGAFG00000013019	-	84	40.476
ENSGAFG00000002659	-	68	41.118	ENSGAFG00000011884	-	98	41.748
ENSGAFG00000002659	-	65	36.546	ENSGAFG00000011290	-	59	36.546
ENSGAFG00000002659	-	74	37.059	ENSGAFG00000013677	-	97	40.468
ENSGAFG00000002659	-	81	34.650	ENSGAFG00000012987	-	69	35.279
ENSGAFG00000002659	-	84	42.017	ENSGAFG00000013420	-	84	42.017
ENSGAFG00000002659	-	78	33.333	ENSGAFG00000010983	-	91	40.865
ENSGAFG00000002659	-	66	44.144	ENSGAFG00000000285	si:dkeyp-113d7.1	60	43.114
ENSGAFG00000002659	-	64	41.045	ENSGAFG00000018663	-	60	42.063
ENSGAFG00000002659	-	64	41.475	ENSGAFG00000000037	-	82	39.755
ENSGAFG00000002659	-	96	37.733	ENSGAFG00000003108	-	99	36.707
ENSGAFG00000002659	-	70	37.963	ENSGAFG00000001402	-	97	37.352
ENSGAFG00000002659	-	79	43.210	ENSGAFG00000016587	-	94	43.210
ENSGAFG00000002659	-	69	43.243	ENSGAFG00000017066	-	68	43.243
ENSGAFG00000002659	-	67	42.308	ENSGAFG00000012069	-	88	46.018
ENSGAFG00000002659	-	64	44.309	ENSGAFG00000013457	-	61	41.353
ENSGAFG00000002659	-	93	38.978	ENSGAFG00000001481	-	96	45.055
ENSGAFG00000002659	-	61	40.909	ENSGAFG00000021126	-	57	40.449
ENSGAFG00000002659	-	63	44.262	ENSGAFG00000008231	-	68	41.034
ENSGAFG00000002659	-	71	37.458	ENSGAFG00000013048	-	83	40.143
ENSGAFG00000002659	-	66	39.927	ENSGAFG00000013624	-	57	42.487
ENSGAFG00000002659	-	66	37.363	ENSGAFG00000012977	-	87	39.929
ENSGAFG00000002659	-	70	43.810	ENSGAFG00000014188	-	98	50.877
ENSGAFG00000002659	-	70	39.420	ENSGAFG00000017761	-	89	39.420
ENSGAFG00000002659	-	68	35.294	ENSGAFG00000016981	-	76	35.294
ENSGAFG00000002659	-	72	40.113	ENSGAFG00000020509	-	80	43.902
ENSGAFG00000002659	-	65	37.576	ENSGAFG00000003059	gfi1b	76	37.576
ENSGAFG00000002659	-	80	39.076	ENSGAFG00000014085	-	82	37.830
ENSGAFG00000002659	-	90	38.859	ENSGAFG00000018302	-	95	38.859
ENSGAFG00000002659	-	69	38.571	ENSGAFG00000012035	-	91	36.420
ENSGAFG00000002659	-	67	35.112	ENSGAFG00000011906	-	65	35.112
ENSGAFG00000002659	-	66	42.466	ENSGAFG00000011278	-	61	43.089
ENSGAFG00000002659	-	78	37.121	ENSGAFG00000005337	-	84	34.146
ENSGAFG00000002659	-	68	36.902	ENSGAFG00000013616	-	73	38.040
ENSGAFG00000002659	-	75	33.577	ENSGAFG00000009650	-	72	33.577
ENSGAFG00000002659	-	78	40.891	ENSGAFG00000013408	-	91	40.435
ENSGAFG00000002659	-	64	40.860	ENSGAFG00000020499	-	61	40.860
ENSGAFG00000002659	-	69	40.000	ENSGAFG00000018645	-	65	39.519
ENSGAFG00000002659	-	64	41.304	ENSGAFG00000016976	-	62	41.304
ENSGAFG00000002659	-	72	40.123	ENSGAFG00000011944	-	73	40.123
ENSGAFG00000002659	-	67	35.844	ENSGAFG00000016347	znf668	87	36.364
ENSGAFG00000002659	-	64	38.488	ENSGAFG00000001156	-	65	40.206
ENSGAFG00000002659	-	67	34.155	ENSGAFG00000019233	prdm5	79	34.155
ENSGAFG00000002659	-	70	40.361	ENSGAFG00000013934	-	99	40.385
ENSGAFG00000002659	-	70	53.448	ENSGAFG00000013438	-	92	39.344
ENSGAFG00000002659	-	64	44.681	ENSGAFG00000013430	-	96	44.681
ENSGAFG00000002659	-	72	34.731	ENSGAFG00000000293	si:ch211-166g5.4	52	39.241
ENSGAFG00000002659	-	91	41.414	ENSGAFG00000018422	-	82	39.881
ENSGAFG00000002659	-	63	36.364	ENSGAFG00000021427	snai2	72	37.086
ENSGAFG00000002659	-	74	43.210	ENSGAFG00000011965	-	85	38.889
ENSGAFG00000002659	-	92	40.777	ENSGAFG00000018820	-	76	39.184
ENSGAFG00000002659	-	68	33.588	ENSGAFG00000003119	-	74	33.588
ENSGAFG00000002659	-	85	38.395	ENSGAFG00000007104	-	79	38.420
ENSGAFG00000002659	-	65	43.439	ENSGAFG00000016595	-	85	43.919
ENSGAFG00000002659	-	63	45.455	ENSGAFG00000018506	-	97	45.455
ENSGAFG00000002659	-	66	40.714	ENSGAFG00000014362	-	59	38.077
ENSGAFG00000002659	-	78	38.788	ENSGAFG00000014369	-	98	40.816
ENSGAFG00000002659	-	66	43.114	ENSGAFG00000014097	-	69	39.922
ENSGAFG00000002659	-	81	35.664	ENSGAFG00000007636	scrt1b	83	35.664
ENSGAFG00000002659	-	81	37.132	ENSGAFG00000013462	-	87	37.546
ENSGAFG00000002659	-	69	38.686	ENSGAFG00000021139	-	99	38.686
ENSGAFG00000002659	-	67	39.936	ENSGAFG00000021131	-	85	40.541
ENSGAFG00000002659	-	64	40.864	ENSGAFG00000021132	-	63	39.106
ENSGAFG00000002659	-	71	39.419	ENSGAFG00000008204	-	67	39.419
ENSGAFG00000002659	-	65	39.450	ENSGAFG00000013055	-	91	41.414
ENSGAFG00000002659	-	64	40.807	ENSGAFG00000013053	-	54	39.574
ENSGAFG00000002659	-	64	42.157	ENSGAFG00000010637	-	83	43.350
ENSGAFG00000002659	-	65	32.718	ENSGAFG00000012945	-	75	32.317
ENSGAFG00000002659	-	67	38.811	ENSGAFG00000013390	-	66	39.370
ENSGAFG00000002659	-	65	42.105	ENSGAFG00000013396	-	77	42.105
ENSGAFG00000002659	-	81	38.710	ENSGAFG00000016322	-	72	38.710
ENSGAFG00000002659	-	82	37.500	ENSGAFG00000011326	-	98	37.589
ENSGAFG00000002659	-	63	38.824	ENSGAFG00000013252	zbtb16b	59	33.333
ENSGAFG00000002659	-	66	41.121	ENSGAFG00000007528	-	75	43.636
ENSGAFG00000002659	-	67	38.839	ENSGAFG00000012733	-	55	38.839
ENSGAFG00000002659	-	66	41.304	ENSGAFG00000000521	-	72	41.304
ENSGAFG00000002659	-	64	31.301	ENSGAFG00000010053	patz1	61	31.855
ENSGAFG00000002659	-	82	41.532	ENSGAFG00000011938	-	91	41.532
ENSGAFG00000002659	-	67	38.400	ENSGAFG00000007532	-	83	38.400
ENSGAFG00000002659	-	65	43.925	ENSGAFG00000021143	-	80	43.925
ENSGAFG00000002659	-	65	43.077	ENSGAFG00000013006	-	67	43.077
ENSGAFG00000002659	-	71	35.088	ENSGAFG00000013911	-	98	44.444
ENSGAFG00000002659	-	64	37.778	ENSGAFG00000011287	-	55	37.778
ENSGAFG00000002659	-	64	38.614	ENSGAFG00000011288	-	88	38.125
ENSGAFG00000002659	-	64	40.840	ENSGAFG00000020503	-	50	40.840
ENSGAFG00000002659	-	81	41.176	ENSGAFG00000020501	-	66	40.408
ENSGAFG00000002659	-	65	32.275	ENSGAFG00000020507	-	60	40.351
ENSGAFG00000002659	-	72	39.382	ENSGAFG00000020505	-	81	39.700
ENSGAFG00000002659	-	67	34.310	ENSGAFG00000012934	-	77	34.310
ENSGAFG00000002659	-	66	40.293	ENSGAFG00000013491	-	70	40.650
ENSGAFG00000002659	-	72	42.767	ENSGAFG00000011940	-	79	38.786
ENSGAFG00000002659	-	70	44.172	ENSGAFG00000012767	-	84	44.172
ENSGAFG00000002659	-	67	43.195	ENSGAFG00000014563	-	55	42.537
ENSGAFG00000002659	-	69	40.179	ENSGAFG00000014303	-	50	40.179
ENSGAFG00000002659	-	69	30.233	ENSGAFG00000000345	si:dkey-89b17.4	67	30.233
ENSGAFG00000002659	-	64	41.339	ENSGAFG00000011174	-	85	42.000
ENSGAFG00000002659	-	78	39.465	ENSGAFG00000016093	-	81	39.465
ENSGAFG00000002659	-	82	36.702	ENSGAFG00000013969	-	94	41.475
ENSGAFG00000002659	-	66	38.318	ENSGAFG00000000266	-	73	38.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002659	-	90	64.512	ENSAPOG00000001563	-	97	72.979	Acanthochromis_polyacanthus
ENSGAFG00000002659	-	73	58.233	ENSACIG00000015411	-	90	65.415	Amphilophus_citrinellus
ENSGAFG00000002659	-	66	80.169	ENSAOCG00000013589	-	91	80.169	Amphiprion_ocellaris
ENSGAFG00000002659	-	90	54.701	ENSAOCG00000013505	-	91	58.963	Amphiprion_ocellaris
ENSGAFG00000002659	-	64	79.821	ENSAPEG00000022774	-	86	79.821	Amphiprion_percula
ENSGAFG00000002659	-	90	57.479	ENSAPEG00000022756	-	92	57.906	Amphiprion_percula
ENSGAFG00000002659	-	64	76.923	ENSATEG00000019261	-	88	76.923	Anabas_testudineus
ENSGAFG00000002659	-	99	53.296	ENSATEG00000019284	-	92	53.296	Anabas_testudineus
ENSGAFG00000002659	-	70	72.581	ENSACLG00000008624	-	97	75.120	Astatotilapia_calliptera
ENSGAFG00000002659	-	59	82.927	ENSACLG00000008606	-	89	82.927	Astatotilapia_calliptera
ENSGAFG00000002659	-	99	54.738	ENSCSEG00000008903	-	99	59.586	Cynoglossus_semilaevis
ENSGAFG00000002659	-	88	65.985	ENSCVAG00000016534	-	77	76.064	Cyprinodon_variegatus
ENSGAFG00000002659	-	65	61.864	ENSGMOG00000000494	-	99	61.690	Gadus_morhua
ENSGAFG00000002659	-	69	73.985	ENSGACG00000001377	-	97	73.985	Gasterosteus_aculeatus
ENSGAFG00000002659	-	63	69.922	ENSHBUG00000008502	-	92	69.922	Haplochromis_burtoni
ENSGAFG00000002659	-	89	61.142	ENSHCOG00000000511	-	94	71.951	Hippocampus_comes
ENSGAFG00000002659	-	90	54.672	ENSLBEG00000018509	-	93	72.299	Labrus_bergylta
ENSGAFG00000002659	-	99	59.687	ENSMAMG00000018137	-	99	59.687	Mastacembelus_armatus
ENSGAFG00000002659	-	62	71.315	ENSMZEG00005002583	-	89	71.315	Maylandia_zebra
ENSGAFG00000002659	-	86	60.137	ENSMMOG00000009733	-	96	70.934	Mola_mola
ENSGAFG00000002659	-	66	69.955	ENSMALG00000019991	-	96	69.955	Monopterus_albus
ENSGAFG00000002659	-	71	76.440	ENSNBRG00000008223	-	92	77.984	Neolamprologus_brichardi
ENSGAFG00000002659	-	62	81.356	ENSONIG00000017233	-	99	81.356	Oreochromis_niloticus
ENSGAFG00000002659	-	76	73.208	ENSOMEG00000016463	-	85	73.208	Oryzias_melastigma
ENSGAFG00000002659	-	71	71.186	ENSPMGG00000002384	-	88	71.186	Periophthalmus_magnuspinnatus
ENSGAFG00000002659	-	100	87.066	ENSPFOG00000006287	-	100	95.845	Poecilia_formosa
ENSGAFG00000002659	-	96	89.357	ENSPLAG00000003412	-	99	89.357	Poecilia_latipinna
ENSGAFG00000002659	-	100	92.132	ENSPMEG00000005897	-	100	92.132	Poecilia_mexicana
ENSGAFG00000002659	-	64	88.386	ENSPREG00000021246	-	99	91.339	Poecilia_reticulata
ENSGAFG00000002659	-	69	76.210	ENSPNYG00000023088	-	92	70.312	Pundamilia_nyererei
ENSGAFG00000002659	-	99	59.834	ENSSDUG00000004892	-	99	59.431	Seriola_dumerili
ENSGAFG00000002659	-	66	76.632	ENSSLDG00000005670	-	94	76.632	Seriola_lalandi_dorsalis
ENSGAFG00000002659	-	87	76.842	ENSSPAG00000022219	-	92	77.982	Stegastes_partitus
ENSGAFG00000002659	-	64	76.596	ENSTNIG00000011188	-	98	76.596	Tetraodon_nigroviridis
ENSGAFG00000002659	-	100	89.430	ENSXMAG00000000866	-	100	89.074	Xiphophorus_maculatus