EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000002668 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 14751 bases
Position: chrNHOQ01001904.1:1237559-1252309
Accession: ZDB-GENE-070803-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000003889	TUDOR	PF00567.24	1.3e-107	1	4
ENSGAFP00000003889	TUDOR	PF00567.24	1.3e-107	2	4
ENSGAFP00000003889	TUDOR	PF00567.24	1.3e-107	3	4
ENSGAFP00000003889	TUDOR	PF00567.24	1.3e-107	4	4
ENSGAFP00000003913	TUDOR	PF00567.24	1.3e-107	1	4
ENSGAFP00000003913	TUDOR	PF00567.24	1.3e-107	2	4
ENSGAFP00000003913	TUDOR	PF00567.24	1.3e-107	3	4
ENSGAFP00000003913	TUDOR	PF00567.24	1.3e-107	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000003937	-	4707	-	ENSGAFP00000003889	1133 (aa)	-	-
ENSGAFT00000003961	-	4153	-	ENSGAFP00000003913	1133 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002668	tdrd1	92	34.303	ENSG00000095627	TDRD1	84	34.683	Homo_sapiens
ENSGAFG00000002668	tdrd1	99	55.748	ENSAPOG00000023199	tdrd1	99	55.661	Acanthochromis_polyacanthus
ENSGAFG00000002668	tdrd1	82	35.091	ENSAMEG00000015182	TDRD1	82	35.091	Ailuropoda_melanoleuca
ENSGAFG00000002668	tdrd1	92	58.425	ENSACIG00000010576	tdrd1	98	55.207	Amphilophus_citrinellus
ENSGAFG00000002668	tdrd1	99	54.841	ENSAOCG00000007059	tdrd1	99	55.248	Amphiprion_ocellaris
ENSGAFG00000002668	tdrd1	99	55.404	ENSAPEG00000017049	tdrd1	98	55.319	Amphiprion_percula
ENSGAFG00000002668	tdrd1	94	56.522	ENSATEG00000021627	tdrd1	97	56.522	Anabas_testudineus
ENSGAFG00000002668	tdrd1	88	33.548	ENSAPLG00000012609	TDRD1	92	33.548	Anas_platyrhynchos
ENSGAFG00000002668	tdrd1	88	32.150	ENSACAG00000009854	TDRD1	81	31.813	Anolis_carolinensis
ENSGAFG00000002668	tdrd1	83	35.390	ENSANAG00000035710	TDRD1	80	35.390	Aotus_nancymaae
ENSGAFG00000002668	tdrd1	100	55.723	ENSACLG00000014107	tdrd1	99	55.639	Astatotilapia_calliptera
ENSGAFG00000002668	tdrd1	99	42.700	ENSAMXG00000015146	tdrd1	93	43.604	Astyanax_mexicanus
ENSGAFG00000002668	tdrd1	84	33.052	ENSBTAG00000006855	TDRD1	82	32.980	Bos_taurus
ENSGAFG00000002668	tdrd1	88	34.178	ENSCJAG00000019270	TDRD1	82	35.097	Callithrix_jacchus
ENSGAFG00000002668	tdrd1	88	34.347	ENSCAFG00000011266	TDRD1	85	34.989	Canis_familiaris
ENSGAFG00000002668	tdrd1	84	34.989	ENSCAFG00020012373	TDRD1	84	34.989	Canis_lupus_dingo
ENSGAFG00000002668	tdrd1	84	34.103	ENSCHIG00000012766	TDRD1	83	34.141	Capra_hircus
ENSGAFG00000002668	tdrd1	87	34.022	ENSTSYG00000004935	TDRD1	81	34.022	Carlito_syrichta
ENSGAFG00000002668	tdrd1	85	51.220	ENSCPOG00000004190	TDRD1	81	33.478	Cavia_porcellus
ENSGAFG00000002668	tdrd1	88	34.343	ENSCCAG00000027375	TDRD1	82	35.199	Cebus_capucinus
ENSGAFG00000002668	tdrd1	88	34.507	ENSCATG00000035999	TDRD1	86	34.995	Cercocebus_atys
ENSGAFG00000002668	tdrd1	89	34.698	ENSCLAG00000003935	TDRD1	81	34.698	Chinchilla_lanigera
ENSGAFG00000002668	tdrd1	95	34.642	ENSCSAG00000005071	TDRD1	83	35.099	Chlorocebus_sabaeus
ENSGAFG00000002668	tdrd1	85	40.909	ENSCHOG00000001690	TDRD1	70	40.909	Choloepus_hoffmanni
ENSGAFG00000002668	tdrd1	88	35.924	ENSCPBG00000003780	TDRD1	83	35.572	Chrysemys_picta_bellii
ENSGAFG00000002668	tdrd1	92	34.681	ENSCANG00000035172	TDRD1	83	34.995	Colobus_angolensis_palliatus
ENSGAFG00000002668	tdrd1	83	34.124	ENSCGRG00001004632	Tdrd1	86	34.124	Cricetulus_griseus_chok1gshd
ENSGAFG00000002668	tdrd1	88	33.938	ENSCGRG00000004981	Tdrd1	82	34.328	Cricetulus_griseus_crigri
ENSGAFG00000002668	tdrd1	88	47.902	ENSCSEG00000006983	tdrd1	99	46.452	Cynoglossus_semilaevis
ENSGAFG00000002668	tdrd1	86	61.067	ENSCVAG00000020980	tdrd1	98	61.067	Cyprinodon_variegatus
ENSGAFG00000002668	tdrd1	99	41.408	ENSDARG00000007465	tdrd1	99	41.408	Danio_rerio
ENSGAFG00000002668	tdrd1	84	34.805	ENSDNOG00000012114	TDRD1	77	35.121	Dasypus_novemcinctus
ENSGAFG00000002668	tdrd1	92	33.401	ENSDORG00000009986	Tdrd1	83	33.897	Dipodomys_ordii
ENSGAFG00000002668	tdrd1	78	33.687	ENSETEG00000020143	TDRD1	76	33.907	Echinops_telfairi
ENSGAFG00000002668	tdrd1	86	33.065	ENSEASG00005014802	TDRD1	85	33.065	Equus_asinus_asinus
ENSGAFG00000002668	tdrd1	82	42.537	ENSECAG00000009748	TDRD1	83	42.537	Equus_caballus
ENSGAFG00000002668	tdrd1	83	34.159	ENSEEUG00000010076	TDRD1	81	34.159	Erinaceus_europaeus
ENSGAFG00000002668	tdrd1	99	43.457	ENSELUG00000024364	tdrd1	98	43.410	Esox_lucius
ENSGAFG00000002668	tdrd1	86	33.367	ENSFCAG00000000632	TDRD1	87	33.770	Felis_catus
ENSGAFG00000002668	tdrd1	73	33.968	ENSFALG00000002237	TDRD1	91	33.801	Ficedula_albicollis
ENSGAFG00000002668	tdrd1	89	34.565	ENSFDAG00000013225	TDRD1	82	34.565	Fukomys_damarensis
ENSGAFG00000002668	tdrd1	93	50.966	ENSFHEG00000009203	tdrd1	98	50.896	Fundulus_heteroclitus
ENSGAFG00000002668	tdrd1	72	55.670	ENSGMOG00000016797	-	67	55.670	Gadus_morhua
ENSGAFG00000002668	tdrd1	94	30.626	ENSGALG00000046180	TDRD1	92	30.626	Gallus_gallus
ENSGAFG00000002668	tdrd1	75	58.838	ENSGACG00000006590	tdrd1	100	58.838	Gasterosteus_aculeatus
ENSGAFG00000002668	tdrd1	92	34.438	ENSGGOG00000004250	TDRD1	83	34.990	Gorilla_gorilla
ENSGAFG00000002668	tdrd1	100	56.067	ENSHBUG00000005216	tdrd1	99	55.900	Haplochromis_burtoni
ENSGAFG00000002668	tdrd1	89	32.430	ENSHGLG00000010877	TDRD1	82	32.430	Heterocephalus_glaber_female
ENSGAFG00000002668	tdrd1	89	34.081	ENSHGLG00100013857	TDRD1	84	34.081	Heterocephalus_glaber_male
ENSGAFG00000002668	tdrd1	88	44.142	ENSHCOG00000002840	tdrd1	90	44.100	Hippocampus_comes
ENSGAFG00000002668	tdrd1	99	44.000	ENSIPUG00000017232	tdrd1	92	47.133	Ictalurus_punctatus
ENSGAFG00000002668	tdrd1	84	34.894	ENSSTOG00000003221	TDRD1	83	34.894	Ictidomys_tridecemlineatus
ENSGAFG00000002668	tdrd1	98	32.425	ENSJJAG00000014720	Tdrd1	86	32.694	Jaculus_jaculus
ENSGAFG00000002668	tdrd1	89	59.924	ENSKMAG00000018558	tdrd1	98	59.924	Kryptolebias_marmoratus
ENSGAFG00000002668	tdrd1	99	57.443	ENSLBEG00000004161	tdrd1	98	57.359	Labrus_bergylta
ENSGAFG00000002668	tdrd1	86	33.101	ENSLACG00000011559	TDRD1	88	33.199	Latimeria_chalumnae
ENSGAFG00000002668	tdrd1	99	38.961	ENSLOCG00000012030	tdrd1	100	42.794	Lepisosteus_oculatus
ENSGAFG00000002668	tdrd1	85	33.367	ENSLAFG00000011575	TDRD1	98	33.266	Loxodonta_africana
ENSGAFG00000002668	tdrd1	92	34.608	ENSMFAG00000043487	TDRD1	84	34.995	Macaca_fascicularis
ENSGAFG00000002668	tdrd1	92	34.542	ENSMMUG00000022517	TDRD1	83	34.995	Macaca_mulatta
ENSGAFG00000002668	tdrd1	92	34.577	ENSMNEG00000031108	TDRD1	84	34.995	Macaca_nemestrina
ENSGAFG00000002668	tdrd1	92	34.476	ENSMLEG00000032281	TDRD1	83	34.891	Mandrillus_leucophaeus
ENSGAFG00000002668	tdrd1	99	56.343	ENSMAMG00000015287	tdrd1	99	56.294	Mastacembelus_armatus
ENSGAFG00000002668	tdrd1	100	55.649	ENSMZEG00005025315	tdrd1	99	55.565	Maylandia_zebra
ENSGAFG00000002668	tdrd1	93	30.148	ENSMGAG00000011067	TDRD1	99	31.901	Meleagris_gallopavo
ENSGAFG00000002668	tdrd1	74	35.394	ENSMAUG00000012164	Tdrd1	78	35.394	Mesocricetus_auratus
ENSGAFG00000002668	tdrd1	92	34.303	ENSMICG00000016190	TDRD1	84	34.801	Microcebus_murinus
ENSGAFG00000002668	tdrd1	83	34.183	ENSMOCG00000022360	Tdrd1	84	34.395	Microtus_ochrogaster
ENSGAFG00000002668	tdrd1	99	51.892	ENSMMOG00000014068	tdrd1	99	51.417	Mola_mola
ENSGAFG00000002668	tdrd1	89	33.298	ENSMODG00000009788	TDRD1	82	33.298	Monodelphis_domestica
ENSGAFG00000002668	tdrd1	99	55.211	ENSMALG00000022115	tdrd1	98	56.137	Monopterus_albus
ENSGAFG00000002668	tdrd1	94	32.231	MGP_CAROLIEiJ_G0023095	Tdrd1	86	32.415	Mus_caroli
ENSGAFG00000002668	tdrd1	94	32.904	ENSMUSG00000025081	Tdrd1	86	32.996	Mus_musculus
ENSGAFG00000002668	tdrd1	94	31.618	MGP_PahariEiJ_G0014583	Tdrd1	88	30.858	Mus_pahari
ENSGAFG00000002668	tdrd1	94	32.505	MGP_SPRETEiJ_G0024016	Tdrd1	86	32.597	Mus_spretus
ENSGAFG00000002668	tdrd1	84	33.792	ENSMPUG00000001987	TDRD1	83	33.792	Mustela_putorius_furo
ENSGAFG00000002668	tdrd1	96	33.532	ENSNGAG00000015231	Tdrd1	88	34.325	Nannospalax_galili
ENSGAFG00000002668	tdrd1	99	54.043	ENSNBRG00000017920	tdrd1	98	53.957	Neolamprologus_brichardi
ENSGAFG00000002668	tdrd1	89	34.013	ENSNLEG00000016228	TDRD1	82	33.437	Nomascus_leucogenys
ENSGAFG00000002668	tdrd1	84	33.978	ENSOPRG00000009180	TDRD1	87	33.978	Ochotona_princeps
ENSGAFG00000002668	tdrd1	89	34.962	ENSODEG00000011965	TDRD1	83	34.962	Octodon_degus
ENSGAFG00000002668	tdrd1	100	57.021	ENSONIG00000016382	tdrd1	100	56.936	Oreochromis_niloticus
ENSGAFG00000002668	tdrd1	86	33.642	ENSOANG00000001562	TDRD1	81	33.642	Ornithorhynchus_anatinus
ENSGAFG00000002668	tdrd1	86	34.604	ENSOCUG00000025327	TDRD1	87	34.604	Oryctolagus_cuniculus
ENSGAFG00000002668	tdrd1	98	51.333	ENSORLG00000004833	tdrd1	99	51.247	Oryzias_latipes
ENSGAFG00000002668	tdrd1	98	51.593	ENSORLG00020019231	tdrd1	98	52.783	Oryzias_latipes_hni
ENSGAFG00000002668	tdrd1	98	51.817	ENSORLG00015017184	tdrd1	99	51.730	Oryzias_latipes_hsok
ENSGAFG00000002668	tdrd1	99	50.970	ENSOMEG00000023637	tdrd1	98	51.019	Oryzias_melastigma
ENSGAFG00000002668	tdrd1	84	34.778	ENSOGAG00000001370	TDRD1	84	34.778	Otolemur_garnettii
ENSGAFG00000002668	tdrd1	84	33.788	ENSOARG00000014200	-	82	33.893	Ovis_aries
ENSGAFG00000002668	tdrd1	95	34.303	ENSPPAG00000041621	TDRD1	83	34.783	Pan_paniscus
ENSGAFG00000002668	tdrd1	86	33.569	ENSPPRG00000000191	TDRD1	87	33.871	Panthera_pardus
ENSGAFG00000002668	tdrd1	89	33.010	ENSPTIG00000010264	TDRD1	85	33.771	Panthera_tigris_altaica
ENSGAFG00000002668	tdrd1	95	34.303	ENSPTRG00000002958	TDRD1	83	34.783	Pan_troglodytes
ENSGAFG00000002668	tdrd1	92	34.406	ENSPANG00000020752	TDRD1	87	34.787	Papio_anubis
ENSGAFG00000002668	tdrd1	96	39.763	ENSPKIG00000010586	tdrd1	93	39.763	Paramormyrops_kingsleyae
ENSGAFG00000002668	tdrd1	87	33.537	ENSPSIG00000014655	TDRD1	79	33.817	Pelodiscus_sinensis
ENSGAFG00000002668	tdrd1	82	48.941	ENSPMGG00000018890	tdrd1	98	49.620	Periophthalmus_magnuspinnatus
ENSGAFG00000002668	tdrd1	83	34.995	ENSPEMG00000004582	Tdrd1	88	34.891	Peromyscus_maniculatus_bairdii
ENSGAFG00000002668	tdrd1	69	32.941	ENSPMAG00000004416	-	99	32.941	Petromyzon_marinus
ENSGAFG00000002668	tdrd1	86	33.333	ENSPCIG00000009739	TDRD1	81	33.333	Phascolarctos_cinereus
ENSGAFG00000002668	tdrd1	92	88.775	ENSPFOG00000002145	tdrd1	100	88.775	Poecilia_formosa
ENSGAFG00000002668	tdrd1	100	88.448	ENSPLAG00000010241	tdrd1	100	88.448	Poecilia_latipinna
ENSGAFG00000002668	tdrd1	100	89.728	ENSPMEG00000021893	tdrd1	100	89.728	Poecilia_mexicana
ENSGAFG00000002668	tdrd1	100	88.746	ENSPREG00000022663	tdrd1	100	88.746	Poecilia_reticulata
ENSGAFG00000002668	tdrd1	92	33.066	ENSPPYG00000002671	TDRD1	83	33.506	Pongo_abelii
ENSGAFG00000002668	tdrd1	89	32.316	ENSPCAG00000006692	TDRD1	72	32.316	Procavia_capensis
ENSGAFG00000002668	tdrd1	86	34.070	ENSPCOG00000026619	TDRD1	85	34.038	Propithecus_coquereli
ENSGAFG00000002668	tdrd1	88	33.367	ENSPVAG00000003055	TDRD1	82	34.004	Pteropus_vampyrus
ENSGAFG00000002668	tdrd1	100	53.607	ENSPNYG00000001706	tdrd1	99	53.523	Pundamilia_nyererei
ENSGAFG00000002668	tdrd1	98	43.493	ENSPNAG00000005831	tdrd1	97	43.493	Pygocentrus_nattereri
ENSGAFG00000002668	tdrd1	94	32.231	ENSRNOG00000017064	Tdrd1	86	32.231	Rattus_norvegicus
ENSGAFG00000002668	tdrd1	92	34.542	ENSRBIG00000029668	TDRD1	86	34.927	Rhinopithecus_bieti
ENSGAFG00000002668	tdrd1	92	34.542	ENSRROG00000043379	TDRD1	83	34.927	Rhinopithecus_roxellana
ENSGAFG00000002668	tdrd1	88	34.441	ENSSBOG00000023561	TDRD1	81	35.269	Saimiri_boliviensis_boliviensis
ENSGAFG00000002668	tdrd1	83	33.546	ENSSHAG00000014311	TDRD1	83	33.546	Sarcophilus_harrisii
ENSGAFG00000002668	tdrd1	87	40.778	ENSSFOG00015022020	tdrd1	94	40.778	Scleropages_formosus
ENSGAFG00000002668	tdrd1	99	55.682	ENSSMAG00000019271	tdrd1	98	55.265	Scophthalmus_maximus
ENSGAFG00000002668	tdrd1	90	59.245	ENSSDUG00000022012	tdrd1	95	59.357	Seriola_dumerili
ENSGAFG00000002668	tdrd1	90	59.528	ENSSLDG00000006423	tdrd1	96	59.434	Seriola_lalandi_dorsalis
ENSGAFG00000002668	tdrd1	88	37.786	ENSSARG00000008828	TDRD1	65	37.786	Sorex_araneus
ENSGAFG00000002668	tdrd1	85	36.082	ENSSPUG00000005015	TDRD1	80	32.147	Sphenodon_punctatus
ENSGAFG00000002668	tdrd1	99	54.762	ENSSPAG00000018805	tdrd1	99	54.677	Stegastes_partitus
ENSGAFG00000002668	tdrd1	88	33.468	ENSSSCG00000021075	TDRD1	83	33.828	Sus_scrofa
ENSGAFG00000002668	tdrd1	72	35.537	ENSTGUG00000010905	TDRD1	94	35.332	Taeniopygia_guttata
ENSGAFG00000002668	tdrd1	89	51.635	ENSTRUG00000012142	tdrd1	100	51.734	Takifugu_rubripes
ENSGAFG00000002668	tdrd1	82	44.309	ENSTNIG00000018898	tdrd1	100	44.273	Tetraodon_nigroviridis
ENSGAFG00000002668	tdrd1	84	37.304	ENSTBEG00000014417	-	83	35.915	Tupaia_belangeri
ENSGAFG00000002668	tdrd1	94	30.000	ENSTTRG00000010147	TDRD1	85	30.000	Tursiops_truncatus
ENSGAFG00000002668	tdrd1	87	34.128	ENSUAMG00000009025	TDRD1	82	34.128	Ursus_americanus
ENSGAFG00000002668	tdrd1	83	34.520	ENSUMAG00000000705	TDRD1	82	34.520	Ursus_maritimus
ENSGAFG00000002668	tdrd1	82	34.498	ENSVPAG00000004000	TDRD1	80	34.498	Vicugna_pacos
ENSGAFG00000002668	tdrd1	84	35.132	ENSVVUG00000009750	TDRD1	85	35.132	Vulpes_vulpes
ENSGAFG00000002668	tdrd1	89	87.118	ENSXCOG00000006412	tdrd1	98	91.263	Xiphophorus_couchianus
ENSGAFG00000002668	tdrd1	100	86.661	ENSXMAG00000008104	tdrd1	100	86.661	Xiphophorus_maculatus