EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000002749 (Gene tree)
Gene ID: -
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B (autoantigen La)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8672 bases
Position: chrNHOQ01000293.1:6318054-6326725
Accession: ZDB-GENE-030131-223
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000004031	RRM_1	PF00076.22	1e-12	1	1
ENSGAFP00000004031	RRM_3	PF08777.11	2.3e-28	1	1
ENSGAFP00000004031	La	PF05383.17	4.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000004082	-	4417	-	ENSGAFP00000004031	403 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002749's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002749	ssb	100	55.501	ENSG00000138385	SSB	98	62.712	Homo_sapiens
ENSGAFG00000002749	ssb	100	81.886	ENSAPOG00000003448	ssb	100	81.390	Acanthochromis_polyacanthus
ENSGAFG00000002749	ssb	100	54.177	ENSAMEG00000010507	SSB	99	54.177	Ailuropoda_melanoleuca
ENSGAFG00000002749	ssb	92	79.189	ENSACIG00000001738	ssb	95	79.292	Amphilophus_citrinellus
ENSGAFG00000002749	ssb	100	81.886	ENSAOCG00000020398	ssb	100	81.390	Amphiprion_ocellaris
ENSGAFG00000002749	ssb	100	82.134	ENSAPEG00000020395	ssb	100	81.638	Amphiprion_percula
ENSGAFG00000002749	ssb	100	82.630	ENSATEG00000016884	ssb	100	82.630	Anabas_testudineus
ENSGAFG00000002749	ssb	100	52.706	ENSAPLG00000006109	SSB	99	52.830	Anas_platyrhynchos
ENSGAFG00000002749	ssb	100	53.771	ENSACAG00000017008	SSB	99	53.285	Anolis_carolinensis
ENSGAFG00000002749	ssb	100	50.000	ENSANAG00000027195	-	99	49.144	Aotus_nancymaae
ENSGAFG00000002749	ssb	100	75.000	ENSACLG00000010798	ssb	100	75.000	Astatotilapia_calliptera
ENSGAFG00000002749	ssb	100	61.220	ENSAMXG00000012606	ssb	100	61.463	Astyanax_mexicanus
ENSGAFG00000002749	ssb	100	56.757	ENSBTAG00000008716	SSB	99	56.158	Bos_taurus
ENSGAFG00000002749	ssb	74	34.098	WBGene00016653	C44E4.4	76	34.098	Caenorhabditis_elegans
ENSGAFG00000002749	ssb	100	55.911	ENSCJAG00000045073	SSB	99	55.665	Callithrix_jacchus
ENSGAFG00000002749	ssb	100	56.265	ENSCAFG00000012418	SSB	99	56.020	Canis_familiaris
ENSGAFG00000002749	ssb	100	56.265	ENSCAFG00020002900	SSB	99	56.020	Canis_lupus_dingo
ENSGAFG00000002749	ssb	100	56.158	ENSCHIG00000022624	-	99	55.911	Capra_hircus
ENSGAFG00000002749	ssb	100	52.709	ENSCHIG00000022196	-	99	52.217	Capra_hircus
ENSGAFG00000002749	ssb	99	56.049	ENSTSYG00000000097	SSB	99	55.802	Carlito_syrichta
ENSGAFG00000002749	ssb	100	56.897	ENSCPOG00000003338	SSB	99	56.650	Cavia_porcellus
ENSGAFG00000002749	ssb	100	55.665	ENSCCAG00000035147	SSB	99	55.419	Cebus_capucinus
ENSGAFG00000002749	ssb	98	42.317	ENSCATG00000042909	-	96	41.814	Cercocebus_atys
ENSGAFG00000002749	ssb	72	51.890	ENSCATG00000036701	SSB	83	51.546	Cercocebus_atys
ENSGAFG00000002749	ssb	100	56.158	ENSCLAG00000015617	-	99	55.911	Chinchilla_lanigera
ENSGAFG00000002749	ssb	100	56.158	ENSCSAG00000015200	SSB	88	55.911	Chlorocebus_sabaeus
ENSGAFG00000002749	ssb	99	51.372	ENSCSAG00000018390	-	100	50.873	Chlorocebus_sabaeus
ENSGAFG00000002749	ssb	100	55.665	ENSCHOG00000007763	SSB	99	55.419	Choloepus_hoffmanni
ENSGAFG00000002749	ssb	100	58.780	ENSCPBG00000006519	SSB	99	58.537	Chrysemys_picta_bellii
ENSGAFG00000002749	ssb	100	48.522	ENSCANG00000033240	-	99	47.044	Colobus_angolensis_palliatus
ENSGAFG00000002749	ssb	94	44.474	ENSCANG00000028838	-	89	44.211	Colobus_angolensis_palliatus
ENSGAFG00000002749	ssb	100	56.158	ENSCANG00000027695	SSB	99	55.911	Colobus_angolensis_palliatus
ENSGAFG00000002749	ssb	100	50.856	ENSCGRG00001024831	Ssb	99	50.856	Cricetulus_griseus_chok1gshd
ENSGAFG00000002749	ssb	100	50.856	ENSCGRG00000005387	Ssb	99	50.856	Cricetulus_griseus_crigri
ENSGAFG00000002749	ssb	99	81.407	ENSCSEG00000011599	ssb	99	81.108	Cynoglossus_semilaevis
ENSGAFG00000002749	ssb	100	86.386	ENSCVAG00000021558	ssb	100	86.139	Cyprinodon_variegatus
ENSGAFG00000002749	ssb	100	63.971	ENSDARG00000029252	ssb	100	62.222	Danio_rerio
ENSGAFG00000002749	ssb	100	55.911	ENSDNOG00000013450	SSB	99	55.665	Dasypus_novemcinctus
ENSGAFG00000002749	ssb	100	51.220	ENSDORG00000005543	Ssb	99	50.976	Dipodomys_ordii
ENSGAFG00000002749	ssb	84	34.746	FBgn0011638	La	80	34.421	Drosophila_melanogaster
ENSGAFG00000002749	ssb	50	61.881	ENSETEG00000004614	-	52	61.881	Echinops_telfairi
ENSGAFG00000002749	ssb	98	45.477	ENSEBUG00000001237	ssb	96	45.178	Eptatretus_burgeri
ENSGAFG00000002749	ssb	100	56.650	ENSEASG00005022835	SSB	99	56.404	Equus_asinus_asinus
ENSGAFG00000002749	ssb	100	56.650	ENSECAG00000018495	SSB	99	56.404	Equus_caballus
ENSGAFG00000002749	ssb	76	46.753	ENSEEUG00000008077	SSB	78	46.753	Erinaceus_europaeus
ENSGAFG00000002749	ssb	100	68.966	ENSELUG00000020929	ssb	100	66.093	Esox_lucius
ENSGAFG00000002749	ssb	100	57.002	ENSFCAG00000011601	SSB	99	56.757	Felis_catus
ENSGAFG00000002749	ssb	99	54.791	ENSFALG00000000930	SSB	99	55.037	Ficedula_albicollis
ENSGAFG00000002749	ssb	100	56.404	ENSFDAG00000000598	SSB	99	56.158	Fukomys_damarensis
ENSGAFG00000002749	ssb	74	84.768	ENSFHEG00000003268	ssb	93	84.768	Fundulus_heteroclitus
ENSGAFG00000002749	ssb	99	71.852	ENSGMOG00000002664	ssb	100	70.617	Gadus_morhua
ENSGAFG00000002749	ssb	99	55.501	ENSGALG00000009677	SSB	99	54.279	Gallus_gallus
ENSGAFG00000002749	ssb	100	77.262	ENSGACG00000005107	ssb	100	76.528	Gasterosteus_aculeatus
ENSGAFG00000002749	ssb	100	58.293	ENSGAGG00000007807	SSB	99	58.049	Gopherus_agassizii
ENSGAFG00000002749	ssb	54	52.941	ENSGGOG00000023471	-	89	52.036	Gorilla_gorilla
ENSGAFG00000002749	ssb	100	47.291	ENSGGOG00000024891	-	99	46.798	Gorilla_gorilla
ENSGAFG00000002749	ssb	100	75.495	ENSHBUG00000006584	ssb	100	74.505	Haplochromis_burtoni
ENSGAFG00000002749	ssb	100	50.735	ENSHGLG00000004478	-	99	50.490	Heterocephalus_glaber_female
ENSGAFG00000002749	ssb	97	50.761	ENSHGLG00000005832	-	99	49.015	Heterocephalus_glaber_female
ENSGAFG00000002749	ssb	100	56.068	ENSHGLG00000017580	-	99	55.718	Heterocephalus_glaber_female
ENSGAFG00000002749	ssb	100	50.246	ENSHGLG00100008767	-	99	50.000	Heterocephalus_glaber_male
ENSGAFG00000002749	ssb	100	56.068	ENSHGLG00100003084	-	99	55.718	Heterocephalus_glaber_male
ENSGAFG00000002749	ssb	99	75.063	ENSHCOG00000019011	ssb	99	74.811	Hippocampus_comes
ENSGAFG00000002749	ssb	100	63.592	ENSIPUG00000003681	SSB	100	61.557	Ictalurus_punctatus
ENSGAFG00000002749	ssb	100	55.665	ENSSTOG00000008416	SSB	99	54.926	Ictidomys_tridecemlineatus
ENSGAFG00000002749	ssb	89	44.044	ENSJJAG00000016250	-	94	43.767	Jaculus_jaculus
ENSGAFG00000002749	ssb	100	49.645	ENSJJAG00000023158	-	99	48.815	Jaculus_jaculus
ENSGAFG00000002749	ssb	100	84.367	ENSKMAG00000017317	ssb	100	84.119	Kryptolebias_marmoratus
ENSGAFG00000002749	ssb	100	82.382	ENSLBEG00000017345	ssb	100	81.638	Labrus_bergylta
ENSGAFG00000002749	ssb	100	54.523	ENSLACG00000014056	SSB	99	54.523	Latimeria_chalumnae
ENSGAFG00000002749	ssb	100	65.770	ENSLOCG00000007933	ssb	99	65.526	Lepisosteus_oculatus
ENSGAFG00000002749	ssb	100	47.901	ENSLAFG00000028909	-	99	47.160	Loxodonta_africana
ENSGAFG00000002749	ssb	100	52.257	ENSLAFG00000000867	-	99	52.494	Loxodonta_africana
ENSGAFG00000002749	ssb	73	42.712	ENSLAFG00000026721	-	97	42.712	Loxodonta_africana
ENSGAFG00000002749	ssb	100	56.158	ENSMFAG00000039066	SSB	99	55.911	Macaca_fascicularis
ENSGAFG00000002749	ssb	89	47.922	ENSMFAG00000041478	-	91	50.456	Macaca_fascicularis
ENSGAFG00000002749	ssb	100	47.912	ENSMMUG00000011724	-	78	51.064	Macaca_mulatta
ENSGAFG00000002749	ssb	98	42.065	ENSMMUG00000039889	-	97	41.814	Macaca_mulatta
ENSGAFG00000002749	ssb	100	56.158	ENSMMUG00000023051	SSB	99	55.911	Macaca_mulatta
ENSGAFG00000002749	ssb	100	48.537	ENSMNEG00000028321	SSB	85	66.957	Macaca_nemestrina
ENSGAFG00000002749	ssb	89	47.922	ENSMNEG00000034698	-	91	50.456	Macaca_nemestrina
ENSGAFG00000002749	ssb	100	39.409	ENSMLEG00000042644	-	79	41.033	Mandrillus_leucophaeus
ENSGAFG00000002749	ssb	100	56.158	ENSMLEG00000035717	SSB	88	66.957	Mandrillus_leucophaeus
ENSGAFG00000002749	ssb	100	82.630	ENSMAMG00000004800	ssb	100	82.630	Mastacembelus_armatus
ENSGAFG00000002749	ssb	100	75.000	ENSMZEG00005005749	ssb	100	75.000	Maylandia_zebra
ENSGAFG00000002749	ssb	99	55.990	ENSMGAG00000010328	SSB	95	61.421	Meleagris_gallopavo
ENSGAFG00000002749	ssb	100	56.158	ENSMICG00000028252	-	99	55.911	Microcebus_murinus
ENSGAFG00000002749	ssb	99	49.626	ENSMICG00000033304	-	93	52.446	Microcebus_murinus
ENSGAFG00000002749	ssb	100	41.728	ENSMODG00000019271	-	51	51.124	Monodelphis_domestica
ENSGAFG00000002749	ssb	93	55.469	ENSMODG00000008227	-	99	53.865	Monodelphis_domestica
ENSGAFG00000002749	ssb	100	41.872	ENSMODG00000007027	-	99	50.279	Monodelphis_domestica
ENSGAFG00000002749	ssb	91	80.822	ENSMALG00000008045	ssb	88	80.654	Monopterus_albus
ENSGAFG00000002749	ssb	100	51.190	MGP_CAROLIEiJ_G0023629	-	98	62.420	Mus_caroli
ENSGAFG00000002749	ssb	100	51.190	ENSMUSG00000068882	Ssb	98	62.420	Mus_musculus
ENSGAFG00000002749	ssb	100	50.952	MGP_PahariEiJ_G0025081	-	98	61.783	Mus_pahari
ENSGAFG00000002749	ssb	100	51.190	MGP_SPRETEiJ_G0024551	Ssb	98	62.420	Mus_spretus
ENSGAFG00000002749	ssb	100	56.897	ENSMPUG00000000785	SSB	99	56.650	Mustela_putorius_furo
ENSGAFG00000002749	ssb	100	54.785	ENSMLUG00000016316	SSB	99	54.306	Myotis_lucifugus
ENSGAFG00000002749	ssb	100	75.000	ENSNBRG00000012661	ssb	100	74.257	Neolamprologus_brichardi
ENSGAFG00000002749	ssb	100	40.049	ENSNLEG00000028754	-	78	44.578	Nomascus_leucogenys
ENSGAFG00000002749	ssb	100	55.911	ENSNLEG00000004958	SSB	99	55.665	Nomascus_leucogenys
ENSGAFG00000002749	ssb	62	60.400	ENSMEUG00000001650	-	100	60.400	Notamacropus_eugenii
ENSGAFG00000002749	ssb	51	52.866	ENSOPRG00000008475	-	54	52.866	Ochotona_princeps
ENSGAFG00000002749	ssb	94	55.026	ENSODEG00000004202	-	99	54.762	Octodon_degus
ENSGAFG00000002749	ssb	100	75.990	ENSONIG00000008776	ssb	100	75.495	Oreochromis_niloticus
ENSGAFG00000002749	ssb	100	55.419	ENSOANG00000008543	SSB	99	55.419	Ornithorhynchus_anatinus
ENSGAFG00000002749	ssb	100	55.172	ENSOCUG00000010396	SSB	99	54.926	Oryctolagus_cuniculus
ENSGAFG00000002749	ssb	100	80.893	ENSORLG00000017208	ssb	100	80.893	Oryzias_latipes
ENSGAFG00000002749	ssb	100	80.893	ENSORLG00020022574	ssb	100	81.141	Oryzias_latipes_hni
ENSGAFG00000002749	ssb	100	81.390	ENSORLG00015016592	ssb	100	81.390	Oryzias_latipes_hsok
ENSGAFG00000002749	ssb	100	82.134	ENSOMEG00000003193	ssb	100	81.886	Oryzias_melastigma
ENSGAFG00000002749	ssb	100	53.444	ENSOGAG00000029768	SSB	99	53.207	Otolemur_garnettii
ENSGAFG00000002749	ssb	100	56.158	ENSOARG00000002906	SSB	99	55.911	Ovis_aries
ENSGAFG00000002749	ssb	100	55.501	ENSPPAG00000042673	SSB	99	55.012	Pan_paniscus
ENSGAFG00000002749	ssb	100	47.291	ENSPPAG00000032427	-	100	57.364	Pan_paniscus
ENSGAFG00000002749	ssb	90	47.514	ENSPPAG00000006189	-	91	44.475	Pan_paniscus
ENSGAFG00000002749	ssb	100	57.002	ENSPPRG00000006599	SSB	99	56.757	Panthera_pardus
ENSGAFG00000002749	ssb	100	57.002	ENSPTIG00000011021	SSB	97	56.757	Panthera_tigris_altaica
ENSGAFG00000002749	ssb	100	55.501	ENSPTRG00000012620	SSB	99	55.012	Pan_troglodytes
ENSGAFG00000002749	ssb	100	45.074	ENSPTRG00000042880	-	99	44.581	Pan_troglodytes
ENSGAFG00000002749	ssb	98	38.636	ENSPANG00000031877	-	75	40.938	Papio_anubis
ENSGAFG00000002749	ssb	98	41.310	ENSPANG00000034126	-	96	41.058	Papio_anubis
ENSGAFG00000002749	ssb	100	56.158	ENSPANG00000007440	SSB	99	55.911	Papio_anubis
ENSGAFG00000002749	ssb	100	68.966	ENSPKIG00000019325	ssb	99	68.719	Paramormyrops_kingsleyae
ENSGAFG00000002749	ssb	100	58.293	ENSPSIG00000002265	SSB	93	58.293	Pelodiscus_sinensis
ENSGAFG00000002749	ssb	88	70.621	ENSPMGG00000020075	ssb	90	70.605	Periophthalmus_magnuspinnatus
ENSGAFG00000002749	ssb	88	44.875	ENSPMAG00000002982	ssb	84	44.384	Petromyzon_marinus
ENSGAFG00000002749	ssb	100	55.419	ENSPCIG00000028591	-	99	55.419	Phascolarctos_cinereus
ENSGAFG00000002749	ssb	100	97.022	ENSPFOG00000009650	ssb	100	97.022	Poecilia_formosa
ENSGAFG00000002749	ssb	100	97.519	ENSPLAG00000020498	ssb	100	97.519	Poecilia_latipinna
ENSGAFG00000002749	ssb	100	96.526	ENSPMEG00000001051	ssb	100	96.526	Poecilia_mexicana
ENSGAFG00000002749	ssb	94	96.842	ENSPREG00000003708	ssb	99	96.842	Poecilia_reticulata
ENSGAFG00000002749	ssb	100	55.911	ENSPPYG00000012919	SSB	99	55.665	Pongo_abelii
ENSGAFG00000002749	ssb	95	54.688	ENSPCAG00000010276	SSB	99	54.688	Procavia_capensis
ENSGAFG00000002749	ssb	100	50.493	ENSPCOG00000023189	-	99	50.246	Propithecus_coquereli
ENSGAFG00000002749	ssb	100	54.680	ENSPCOG00000015741	-	92	65.517	Propithecus_coquereli
ENSGAFG00000002749	ssb	88	57.865	ENSPVAG00000006615	SSB	88	60.645	Pteropus_vampyrus
ENSGAFG00000002749	ssb	100	75.000	ENSPNYG00000006444	ssb	100	75.000	Pundamilia_nyererei
ENSGAFG00000002749	ssb	100	61.951	ENSPNAG00000011708	ssb	100	60.244	Pygocentrus_nattereri
ENSGAFG00000002749	ssb	100	50.952	ENSRNOG00000007998	Ssb	99	50.000	Rattus_norvegicus
ENSGAFG00000002749	ssb	100	51.351	ENSRNOG00000011606	AABR07061825.1	99	50.860	Rattus_norvegicus
ENSGAFG00000002749	ssb	94	47.895	ENSRBIG00000041232	-	98	46.579	Rhinopithecus_bieti
ENSGAFG00000002749	ssb	98	40.704	ENSRBIG00000029918	-	96	40.201	Rhinopithecus_bieti
ENSGAFG00000002749	ssb	87	52.000	ENSRBIG00000041608	-	94	49.020	Rhinopithecus_bieti
ENSGAFG00000002749	ssb	100	48.780	ENSRBIG00000041972	SSB	88	66.957	Rhinopithecus_bieti
ENSGAFG00000002749	ssb	98	45.729	ENSRROG00000007149	-	97	45.477	Rhinopithecus_roxellana
ENSGAFG00000002749	ssb	98	48.111	ENSRROG00000031684	-	91	55.556	Rhinopithecus_roxellana
ENSGAFG00000002749	ssb	100	56.158	ENSRROG00000040346	SSB	99	55.911	Rhinopithecus_roxellana
ENSGAFG00000002749	ssb	87	54.286	ENSRROG00000034102	-	96	49.874	Rhinopithecus_roxellana
ENSGAFG00000002749	ssb	100	55.911	ENSSBOG00000027204	SSB	99	55.665	Saimiri_boliviensis_boliviensis
ENSGAFG00000002749	ssb	100	55.665	ENSSHAG00000018062	SSB	99	55.665	Sarcophilus_harrisii
ENSGAFG00000002749	ssb	100	67.157	ENSSFOG00015000550	ssb	99	66.504	Scleropages_formosus
ENSGAFG00000002749	ssb	100	78.412	ENSSMAG00000013885	ssb	98	82.609	Scophthalmus_maximus
ENSGAFG00000002749	ssb	100	84.119	ENSSDUG00000020117	ssb	100	83.623	Seriola_dumerili
ENSGAFG00000002749	ssb	100	79.901	ENSSLDG00000002525	ssb	100	78.660	Seriola_lalandi_dorsalis
ENSGAFG00000002749	ssb	95	51.302	ENSSARG00000007747	SSB	99	51.042	Sorex_araneus
ENSGAFG00000002749	ssb	100	58.191	ENSSPUG00000012112	SSB	99	57.598	Sphenodon_punctatus
ENSGAFG00000002749	ssb	100	81.141	ENSSPAG00000005696	ssb	100	80.645	Stegastes_partitus
ENSGAFG00000002749	ssb	91	54.743	ENSSSCG00000015938	SSB	91	53.117	Sus_scrofa
ENSGAFG00000002749	ssb	95	55.670	ENSTGUG00000007942	SSB	99	55.257	Taeniopygia_guttata
ENSGAFG00000002749	ssb	100	74.938	ENSTRUG00000017839	ssb	100	77.667	Takifugu_rubripes
ENSGAFG00000002749	ssb	91	75.881	ENSTNIG00000000915	ssb	100	74.659	Tetraodon_nigroviridis
ENSGAFG00000002749	ssb	82	66.957	ENSTBEG00000009056	SSB	81	66.957	Tupaia_belangeri
ENSGAFG00000002749	ssb	100	56.757	ENSTTRG00000002152	SSB	99	55.774	Tursiops_truncatus
ENSGAFG00000002749	ssb	93	57.407	ENSUAMG00000027833	SSB	96	57.297	Ursus_americanus
ENSGAFG00000002749	ssb	100	56.020	ENSUMAG00000013907	SSB	99	55.774	Ursus_maritimus
ENSGAFG00000002749	ssb	100	56.404	ENSVPAG00000007183	SSB	99	56.158	Vicugna_pacos
ENSGAFG00000002749	ssb	100	56.265	ENSVVUG00000016573	SSB	77	56.020	Vulpes_vulpes
ENSGAFG00000002749	ssb	99	53.037	ENSXETG00000025402	ssb	99	52.336	Xenopus_tropicalis
ENSGAFG00000002749	ssb	94	92.308	ENSXCOG00000019109	ssb	96	92.371	Xiphophorus_couchianus
ENSGAFG00000002749	ssb	100	95.782	ENSXMAG00000004888	ssb	100	95.782	Xiphophorus_maculatus