EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000002790 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8652 bases
Position: chrNHOQ01001407.1:1605682-1614333
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000004112	MMR_HSR1	PF01926.23	9.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000004172	-	543	-	ENSGAFP00000004121	180 (aa)	-	-
ENSGAFT00000004163	-	2291	-	ENSGAFP00000004112	204 (aa)	-	UPI000DD2A29D

Gene Model

Click here to download ENSGAFG00000002790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000002790	rab18a	77	32.716	ENSGAFG00000020906	rheb	86	32.716
ENSGAFG00000002790	rab18a	73	32.704	ENSGAFG00000014541	rras2	80	32.941
ENSGAFG00000002790	rab18a	79	52.469	ENSGAFG00000015702	zgc:171927	65	52.469
ENSGAFG00000002790	rab18a	72	41.830	ENSGAFG00000015249	-	63	42.105
ENSGAFG00000002790	rab18a	79	46.296	ENSGAFG00000007102	rab11bb	74	46.296
ENSGAFG00000002790	rab18a	80	41.212	ENSGAFG00000001301	rab22a	85	41.212
ENSGAFG00000002790	rab18a	82	44.643	ENSGAFG00000002756	rab15	77	44.643
ENSGAFG00000002790	rab18a	99	83.333	ENSGAFG00000008560	rab18b	93	84.293
ENSGAFG00000002790	rab18a	57	33.613	ENSGAFG00000002547	arl5c	62	33.613
ENSGAFG00000002790	rab18a	91	36.022	ENSGAFG00000007684	rab23	88	36.022
ENSGAFG00000002790	rab18a	93	46.667	ENSGAFG00000000918	-	82	51.497
ENSGAFG00000002790	rab18a	83	39.766	ENSGAFG00000019872	rab41	79	39.766
ENSGAFG00000002790	rab18a	79	45.062	ENSGAFG00000021724	rab25b	77	45.062
ENSGAFG00000002790	rab18a	96	39.234	ENSGAFG00000021725	rab11al	85	41.848
ENSGAFG00000002790	rab18a	80	42.515	ENSGAFG00000008183	si:dkey-34d22.5	75	42.515
ENSGAFG00000002790	rab18a	79	45.679	ENSGAFG00000016549	rab11a	75	45.679
ENSGAFG00000002790	rab18a	87	43.575	ENSGAFG00000003642	-	78	42.857
ENSGAFG00000002790	rab18a	71	44.218	ENSGAFG00000015490	rab33a	53	44.218
ENSGAFG00000002790	rab18a	84	41.341	ENSGAFG00000011713	rab25a	82	50.000
ENSGAFG00000002790	rab18a	82	43.195	ENSGAFG00000017305	RAB15	89	46.324
ENSGAFG00000002790	rab18a	74	42.484	ENSGAFG00000019659	rab33ba	63	42.484
ENSGAFG00000002790	rab18a	83	40.116	ENSGAFG00000006932	-	81	40.116
ENSGAFG00000002790	rab18a	90	40.741	ENSGAFG00000011619	rab5aa	86	40.741
ENSGAFG00000002790	rab18a	75	34.615	ENSGAFG00000012579	rab34a	58	34.641
ENSGAFG00000002790	rab18a	82	35.882	ENSGAFG00000018295	si:ch73-116o1.2	81	35.882
ENSGAFG00000002790	rab18a	86	44.633	ENSGAFG00000005388	si:dkey-16l2.16	82	44.633
ENSGAFG00000002790	rab18a	75	39.355	ENSGAFG00000020102	si:dkey-13a21.4	76	39.355
ENSGAFG00000002790	rab18a	80	41.212	ENSGAFG00000002141	rab42a	76	41.212
ENSGAFG00000002790	rab18a	79	37.952	ENSGAFG00000000591	rab9a	76	37.952
ENSGAFG00000002790	rab18a	95	31.000	ENSGAFG00000000629	RAB29	81	32.934
ENSGAFG00000002790	rab18a	97	36.364	ENSGAFG00000010916	rab6bb	80	39.181
ENSGAFG00000002790	rab18a	90	44.444	ENSGAFG00000014787	-	90	44.865
ENSGAFG00000002790	rab18a	71	42.177	ENSGAFG00000021202	zgc:101559	63	42.177
ENSGAFG00000002790	rab18a	79	46.296	ENSGAFG00000005679	rab11ba	75	45.732
ENSGAFG00000002790	rab18a	83	40.351	ENSGAFG00000017270	rab6ba	80	40.351
ENSGAFG00000002790	rab18a	87	34.637	ENSGAFG00000010541	rras	82	37.195
ENSGAFG00000002790	rab18a	80	37.500	ENSGAFG00000018916	-	74	37.500
ENSGAFG00000002790	rab18a	80	37.725	ENSGAFG00000021688	-	81	37.725
ENSGAFG00000002790	rab18a	75	35.256	ENSGAFG00000015135	rab36	60	35.256
ENSGAFG00000002790	rab18a	80	32.317	ENSGAFG00000021765	kras	87	32.317
ENSGAFG00000002790	rab18a	89	44.022	ENSGAFG00000005477	rab4a	86	44.022
ENSGAFG00000002790	rab18a	87	39.106	ENSGAFG00000006356	rab6a	84	39.106
ENSGAFG00000002790	rab18a	85	43.017	ENSGAFG00000014730	-	86	44.000
ENSGAFG00000002790	rab18a	84	38.728	ENSGAFG00000004604	RAB39B	81	38.728
ENSGAFG00000002790	rab18a	95	44.660	ENSGAFG00000006846	rab2a	78	51.205
ENSGAFG00000002790	rab18a	79	36.145	ENSGAFG00000004099	rab9b	74	36.145
ENSGAFG00000002790	rab18a	84	50.867	ENSGAFG00000020309	rab30	89	50.867
ENSGAFG00000002790	rab18a	80	43.030	ENSGAFG00000000884	rab5c	81	41.111
ENSGAFG00000002790	rab18a	81	31.928	ENSGAFG00000021814	hrasb	87	31.928
ENSGAFG00000002790	rab18a	95	46.939	ENSGAFG00000001289	rab1ab	88	48.333
ENSGAFG00000002790	rab18a	80	37.725	ENSGAFG00000020476	RAB7A	81	37.725
ENSGAFG00000002790	rab18a	86	36.313	ENSGAFG00000005188	rabl2	78	36.313
ENSGAFG00000002790	rab18a	93	46.392	ENSGAFG00000019305	rab1ba	80	51.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002790	rab18a	100	94.608	ENSAPOG00000010760	rab18a	94	95.812	Acanthochromis_polyacanthus
ENSGAFG00000002790	rab18a	100	84.314	ENSACIG00000009617	rab18a	93	84.817	Amphilophus_citrinellus
ENSGAFG00000002790	rab18a	100	95.098	ENSAOCG00000016233	rab18a	94	96.335	Amphiprion_ocellaris
ENSGAFG00000002790	rab18a	100	95.098	ENSAPEG00000005392	rab18a	94	96.335	Amphiprion_percula
ENSGAFG00000002790	rab18a	100	93.137	ENSATEG00000021911	rab18a	94	94.241	Anabas_testudineus
ENSGAFG00000002790	rab18a	100	87.317	ENSACAG00000005463	-	94	88.542	Anolis_carolinensis
ENSGAFG00000002790	rab18a	100	94.608	ENSACLG00000011484	rab18a	100	94.608	Astatotilapia_calliptera
ENSGAFG00000002790	rab18a	100	86.893	ENSCPBG00000015839	-	93	87.958	Chrysemys_picta_bellii
ENSGAFG00000002790	rab18a	96	69.154	ENSCPBG00000027619	-	94	70.899	Chrysemys_picta_bellii
ENSGAFG00000002790	rab18a	97	74.372	ENSCING00000006838	-	95	76.190	Ciona_intestinalis
ENSGAFG00000002790	rab18a	97	73.367	ENSCSAVG00000010348	-	94	75.532	Ciona_savignyi
ENSGAFG00000002790	rab18a	100	93.627	ENSCSEG00000011816	rab18a	94	95.288	Cynoglossus_semilaevis
ENSGAFG00000002790	rab18a	100	97.549	ENSCVAG00000015451	rab18a	100	97.549	Cyprinodon_variegatus
ENSGAFG00000002790	rab18a	100	81.463	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSGAFG00000002790	rab18a	100	89.268	ENSELUG00000003805	rab18a	93	91.099	Esox_lucius
ENSGAFG00000002790	rab18a	100	96.569	ENSFHEG00000019455	rab18a	100	96.569	Fundulus_heteroclitus
ENSGAFG00000002790	rab18a	100	86.893	ENSGAGG00000015642	-	93	87.958	Gopherus_agassizii
ENSGAFG00000002790	rab18a	100	94.608	ENSHBUG00000001518	rab18a	100	94.608	Haplochromis_burtoni
ENSGAFG00000002790	rab18a	99	94.581	ENSLBEG00000005861	rab18a	90	95.288	Labrus_bergylta
ENSGAFG00000002790	rab18a	93	87.895	ENSLACG00000009310	rab18a	92	87.895	Latimeria_chalumnae
ENSGAFG00000002790	rab18a	100	88.293	ENSLOCG00000007491	rab18a	93	89.529	Lepisosteus_oculatus
ENSGAFG00000002790	rab18a	100	91.667	ENSMAMG00000014320	rab18a	94	93.194	Mastacembelus_armatus
ENSGAFG00000002790	rab18a	100	94.118	ENSMZEG00005017235	rab18a	94	95.812	Maylandia_zebra
ENSGAFG00000002790	rab18a	100	93.627	ENSMALG00000009813	rab18a	94	94.764	Monopterus_albus
ENSGAFG00000002790	rab18a	100	94.608	ENSNBRG00000013507	rab18a	100	94.608	Neolamprologus_brichardi
ENSGAFG00000002790	rab18a	94	95.833	ENSORLG00000004624	rab18a	94	95.812	Oryzias_latipes
ENSGAFG00000002790	rab18a	94	96.354	ENSORLG00020008333	rab18a	94	96.335	Oryzias_latipes_hni
ENSGAFG00000002790	rab18a	94	95.312	ENSORLG00015004739	rab18a	94	95.288	Oryzias_latipes_hsok
ENSGAFG00000002790	rab18a	100	95.098	ENSOMEG00000020605	rab18a	100	95.098	Oryzias_melastigma
ENSGAFG00000002790	rab18a	100	87.805	ENSPKIG00000009825	rab18a	92	89.947	Paramormyrops_kingsleyae
ENSGAFG00000002790	rab18a	100	93.137	ENSPMGG00000020409	-	94	93.717	Periophthalmus_magnuspinnatus
ENSGAFG00000002790	rab18a	100	99.020	ENSPFOG00000007571	rab18a	100	99.020	Poecilia_formosa
ENSGAFG00000002790	rab18a	100	99.020	ENSPLAG00000010104	rab18a	100	99.020	Poecilia_latipinna
ENSGAFG00000002790	rab18a	100	99.020	ENSPMEG00000013085	rab18a	100	99.020	Poecilia_mexicana
ENSGAFG00000002790	rab18a	100	99.020	ENSPREG00000005923	rab18a	83	99.020	Poecilia_reticulata
ENSGAFG00000002790	rab18a	100	94.608	ENSPNYG00000007064	rab18a	100	94.608	Pundamilia_nyererei
ENSGAFG00000002790	rab18a	99	80.100	ENSPNAG00000011548	rab18a	95	83.158	Pygocentrus_nattereri
ENSGAFG00000002790	rab18a	100	88.780	ENSSFOG00015017444	rab18a	78	91.053	Scleropages_formosus
ENSGAFG00000002790	rab18a	94	92.228	ENSSMAG00000002969	rab18a	94	92.188	Scophthalmus_maximus
ENSGAFG00000002790	rab18a	94	94.792	ENSSDUG00000003823	rab18a	94	94.764	Seriola_dumerili
ENSGAFG00000002790	rab18a	94	94.792	ENSSLDG00000006977	rab18a	94	94.764	Seriola_lalandi_dorsalis
ENSGAFG00000002790	rab18a	93	88.889	ENSSPUG00000017677	-	92	88.421	Sphenodon_punctatus
ENSGAFG00000002790	rab18a	100	91.176	ENSTRUG00000004984	rab18a	94	92.147	Takifugu_rubripes
ENSGAFG00000002790	rab18a	100	87.864	ENSUMAG00000015574	-	91	89.362	Ursus_maritimus
ENSGAFG00000002790	rab18a	100	86.408	ENSXETG00000004556	rab18	93	89.005	Xenopus_tropicalis
ENSGAFG00000002790	rab18a	100	99.510	ENSXMAG00000024122	rab18a	100	99.510	Xiphophorus_maculatus