EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000002801 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 2976 bases
Position: chrNHOQ01002390.1:24145446-24148421
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000004095	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000004146	-	1082	-	ENSGAFP00000004095	113 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000002801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000002801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000002801	-	99	32.520	ENSGAFG00000006962	arfrp1	60	32.520
ENSGAFG00000002801	-	99	71.053	ENSGAFG00000018151	-	62	71.053
ENSGAFG00000002801	-	96	30.357	ENSGAFG00000010938	arl8ba	62	30.357
ENSGAFG00000002801	-	83	33.654	ENSGAFG00000001289	rab1ab	50	33.654
ENSGAFG00000002801	-	96	31.250	ENSGAFG00000008497	arl8bb	60	31.250
ENSGAFG00000002801	-	99	72.321	ENSGAFG00000009954	-	50	72.321
ENSGAFG00000002801	-	83	33.654	ENSGAFG00000000918	-	50	33.654
ENSGAFG00000002801	-	99	44.643	ENSGAFG00000003465	arl5a	50	44.643
ENSGAFG00000002801	-	85	56.122	ENSGAFG00000012819	-	50	56.122
ENSGAFG00000002801	-	95	33.913	ENSGAFG00000009702	sar1ab	58	33.913
ENSGAFG00000002801	-	83	35.106	ENSGAFG00000004846	-	75	34.831
ENSGAFG00000002801	-	88	61.000	ENSGAFG00000006973	arl1	60	61.000
ENSGAFG00000002801	-	83	34.615	ENSGAFG00000019305	rab1ba	51	34.615
ENSGAFG00000002801	-	83	47.917	ENSGAFG00000012355	ARL6	52	47.917
ENSGAFG00000002801	-	66	32.500	ENSGAFG00000017305	RAB15	54	32.500
ENSGAFG00000002801	-	98	73.874	ENSGAFG00000018703	arf5	62	73.874
ENSGAFG00000002801	-	86	48.000	ENSGAFG00000005872	arl3	53	48.000
ENSGAFG00000002801	-	99	45.536	ENSGAFG00000002547	arl5c	62	45.536
ENSGAFG00000002801	-	99	71.429	ENSGAFG00000010799	arf2b	62	71.429
ENSGAFG00000002801	-	98	75.676	ENSGAFG00000005163	-	62	75.676
ENSGAFG00000002801	-	99	72.321	ENSGAFG00000021727	arf3b	62	72.321
ENSGAFG00000002801	-	99	72.321	ENSGAFG00000021449	-	62	72.321
ENSGAFG00000002801	-	89	50.000	ENSGAFG00000020556	arl4cb	55	50.000
ENSGAFG00000002801	-	88	30.693	ENSGAFG00000017776	arl8a	59	30.693
ENSGAFG00000002801	-	95	32.174	ENSGAFG00000007081	sar1b	58	32.174
ENSGAFG00000002801	-	76	47.126	ENSGAFG00000000058	arl11	55	47.126
ENSGAFG00000002801	-	84	40.351	ENSGAFG00000011077	-	64	40.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000002801	-	96	89.908	ENSAPEG00000002838	-	61	89.908	Amphiprion_percula
ENSGAFG00000002801	-	88	84.848	ENSATEG00000003808	-	58	84.848	Anabas_testudineus
ENSGAFG00000002801	-	96	94.444	ENSATEG00000003847	-	60	94.444	Anabas_testudineus
ENSGAFG00000002801	-	96	88.889	ENSACLG00000009822	-	58	88.889	Astatotilapia_calliptera
ENSGAFG00000002801	-	88	78.788	ENSCVAG00000013902	-	61	78.788	Cyprinodon_variegatus
ENSGAFG00000002801	-	79	92.135	ENSFHEG00000019659	-	50	92.135	Fundulus_heteroclitus
ENSGAFG00000002801	-	98	91.964	ENSGACG00000003831	-	62	91.964	Gasterosteus_aculeatus
ENSGAFG00000002801	-	96	87.037	ENSHBUG00000001250	-	60	87.037	Haplochromis_burtoni
ENSGAFG00000002801	-	98	87.387	ENSLBEG00000027205	-	63	87.387	Labrus_bergylta
ENSGAFG00000002801	-	96	89.815	ENSMAMG00000013955	-	60	89.815	Mastacembelus_armatus
ENSGAFG00000002801	-	96	88.889	ENSMZEG00005016277	-	60	88.889	Maylandia_zebra
ENSGAFG00000002801	-	96	88.889	ENSMZEG00005016274	-	60	88.889	Maylandia_zebra
ENSGAFG00000002801	-	96	84.259	ENSMMOG00000013651	-	60	84.259	Mola_mola
ENSGAFG00000002801	-	96	86.111	ENSONIG00000004340	-	60	86.111	Oreochromis_niloticus
ENSGAFG00000002801	-	98	99.099	ENSPLAG00000015887	-	62	99.099	Poecilia_latipinna
ENSGAFG00000002801	-	98	99.099	ENSPMEG00000007064	-	62	99.099	Poecilia_mexicana
ENSGAFG00000002801	-	98	99.099	ENSPREG00000000912	-	65	99.099	Poecilia_reticulata
ENSGAFG00000002801	-	78	89.773	ENSSMAG00000002487	-	53	89.888	Scophthalmus_maximus
ENSGAFG00000002801	-	98	90.090	ENSSDUG00000020599	-	62	90.090	Seriola_dumerili
ENSGAFG00000002801	-	98	90.991	ENSSLDG00000020097	-	62	90.991	Seriola_lalandi_dorsalis
ENSGAFG00000002801	-	96	88.889	ENSSPAG00000017484	-	60	88.889	Stegastes_partitus
ENSGAFG00000002801	-	96	85.185	ENSTRUG00000025171	-	67	85.185	Takifugu_rubripes
ENSGAFG00000002801	-	100	82.301	ENSTNIG00000005043	-	100	82.301	Tetraodon_nigroviridis
ENSGAFG00000002801	-	98	98.198	ENSXMAG00000029601	-	62	98.198	Xiphophorus_maculatus