EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGAFG00000003020 (Gene tree)
Gene ID
-
Gene Symbol
clp1
Alias
-
Full Name
cleavage and polyadenylation factor I subunit 1
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Minus strand
Length
5663 bases
Position
chrNHOQ01001766.1:3364705-3370367
Accession
ZDB-GENE-030131-5306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000004466Clp1PF06807.147.5e-3011
ENSGAFP00000004454Clp1PF06807.147.6e-3011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000004508-2249-ENSGAFP00000004454441 (aa)-UPI000DD22E47
ENSGAFT00000004519-1308-ENSGAFP00000004466435 (aa)--
Gene Model
Click here to download ENSGAFG00000003020's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003020's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000003020clp19975.870ENSG00000172409CLP19975.870Homo_sapiens
ENSGAFG00000003020clp110094.104ENSAPOG00000008242clp110094.104Acanthochromis_polyacanthus
ENSGAFG00000003020clp19975.406ENSAMEG00000014551CLP19975.172Ailuropoda_melanoleuca
ENSGAFG00000003020clp110093.651ENSACIG00000006310clp19993.651Amphilophus_citrinellus
ENSGAFG00000003020clp110094.331ENSAOCG00000010681clp110094.331Amphiprion_ocellaris
ENSGAFG00000003020clp110094.331ENSAPEG00000012165clp110094.331Amphiprion_percula
ENSGAFG00000003020clp110094.558ENSATEG00000012374clp110094.558Anabas_testudineus
ENSGAFG00000003020clp19975.694ENSACAG00000007139CLP19975.694Anolis_carolinensis
ENSGAFG00000003020clp19975.870ENSANAG00000034935CLP19975.870Aotus_nancymaae
ENSGAFG00000003020clp110093.878ENSACLG00000013573clp110093.878Astatotilapia_calliptera
ENSGAFG00000003020clp19787.264ENSAMXG00000014194clp19887.264Astyanax_mexicanus
ENSGAFG00000003020clp19975.406ENSBTAG00000006493CLP19975.406Bos_taurus
ENSGAFG00000003020clp19647.281WBGene00010304clpf-19747.281Caenorhabditis_elegans
ENSGAFG00000003020clp19975.870ENSCJAG00000008748CLP19975.870Callithrix_jacchus
ENSGAFG00000003020clp19975.406ENSCAFG00000007815CLP19975.406Canis_familiaris
ENSGAFG00000003020clp19975.406ENSCAFG00020000903CLP19975.406Canis_lupus_dingo
ENSGAFG00000003020clp19976.102ENSCHIG00000023497CLP19976.102Capra_hircus
ENSGAFG00000003020clp19975.638ENSTSYG00000006824CLP19975.402Carlito_syrichta
ENSGAFG00000003020clp19975.694ENSCAPG00000009703CLP19975.694Cavia_aperea
ENSGAFG00000003020clp19776.415ENSCPOG00000012554CLP19976.415Cavia_porcellus
ENSGAFG00000003020clp19975.406ENSCCAG00000031957CLP19975.406Cebus_capucinus
ENSGAFG00000003020clp19975.870ENSCATG00000044628CLP19975.870Cercocebus_atys
ENSGAFG00000003020clp19975.638ENSCLAG00000004094CLP19975.638Chinchilla_lanigera
ENSGAFG00000003020clp19975.870ENSCSAG00000005994CLP19975.870Chlorocebus_sabaeus
ENSGAFG00000003020clp19975.231ENSCPBG00000016843CLP19975.231Chrysemys_picta_bellii
ENSGAFG00000003020clp19761.466ENSCING00000003779-9761.466Ciona_intestinalis
ENSGAFG00000003020clp19960.789ENSCSAVG00000003437-9960.789Ciona_savignyi
ENSGAFG00000003020clp19975.870ENSCANG00000034335CLP19975.870Colobus_angolensis_palliatus
ENSGAFG00000003020clp19975.000ENSCGRG00001002227CLP19975.000Cricetulus_griseus_chok1gshd
ENSGAFG00000003020clp19975.000ENSCGRG00000004328CLP19975.000Cricetulus_griseus_crigri
ENSGAFG00000003020clp110090.703ENSCSEG00000008614clp110090.703Cynoglossus_semilaevis
ENSGAFG00000003020clp110097.052ENSCVAG00000020101clp110097.052Cyprinodon_variegatus
ENSGAFG00000003020clp110085.202ENSDARG00000063663clp110085.202Danio_rerio
ENSGAFG00000003020clp19975.349ENSDNOG00000042415CLP19075.058Dasypus_novemcinctus
ENSGAFG00000003020clp19975.174ENSDORG00000014685Clp19975.174Dipodomys_ordii
ENSGAFG00000003020clp19653.349FBgn0033842cbc9753.349Drosophila_melanogaster
ENSGAFG00000003020clp19975.638ENSETEG00000003009CLP19975.638Echinops_telfairi
ENSGAFG00000003020clp19964.733ENSEBUG00000011648clp19964.733Eptatretus_burgeri
ENSGAFG00000003020clp19976.102ENSEASG00005002093CLP19976.102Equus_asinus_asinus
ENSGAFG00000003020clp19976.102ENSECAG00000011597CLP19976.102Equus_caballus
ENSGAFG00000003020clp19974.942ENSEEUG00000012771CLP19974.942Erinaceus_europaeus
ENSGAFG00000003020clp110086.323ENSELUG00000024048clp110086.323Esox_lucius
ENSGAFG00000003020clp19975.638ENSFCAG00000006633CLP19975.638Felis_catus
ENSGAFG00000003020clp19975.694ENSFALG00000011145CLP19975.694Ficedula_albicollis
ENSGAFG00000003020clp19975.638ENSFDAG00000000234CLP19975.638Fukomys_damarensis
ENSGAFG00000003020clp110097.959ENSFHEG00000014760CLP110097.959Fundulus_heteroclitus
ENSGAFG00000003020clp110087.755ENSGMOG00000019340clp110087.755Gadus_morhua
ENSGAFG00000003020clp19975.926ENSGALG00000007370CLP19975.926Gallus_gallus
ENSGAFG00000003020clp110093.197ENSGACG00000017832clp110093.197Gasterosteus_aculeatus
ENSGAFG00000003020clp19975.231ENSGAGG00000013279CLP19975.231Gopherus_agassizii
ENSGAFG00000003020clp19975.870ENSGGOG00000023006CLP19975.870Gorilla_gorilla
ENSGAFG00000003020clp110094.104ENSHBUG00000010436clp110094.104Haplochromis_burtoni
ENSGAFG00000003020clp19975.638ENSHGLG00000009914CLP19975.638Heterocephalus_glaber_female
ENSGAFG00000003020clp19975.638ENSHGLG00100006105CLP19975.638Heterocephalus_glaber_male
ENSGAFG00000003020clp110093.424ENSHCOG00000010072clp110093.424Hippocampus_comes
ENSGAFG00000003020clp19787.470ENSIPUG00000016238clp19983.964Ictalurus_punctatus
ENSGAFG00000003020clp19975.638ENSSTOG00000029257CLP19975.638Ictidomys_tridecemlineatus
ENSGAFG00000003020clp19975.174ENSJJAG00000023691Clp19975.174Jaculus_jaculus
ENSGAFG00000003020clp110095.918ENSKMAG00000011990clp110095.918Kryptolebias_marmoratus
ENSGAFG00000003020clp110094.104ENSLBEG00000010201clp110094.104Labrus_bergylta
ENSGAFG00000003020clp19974.651ENSLACG00000003160CLP19974.651Latimeria_chalumnae
ENSGAFG00000003020clp17285.714ENSLOCG00000008074clp110085.714Lepisosteus_oculatus
ENSGAFG00000003020clp19975.406ENSLAFG00000014907CLP19975.406Loxodonta_africana
ENSGAFG00000003020clp19975.870ENSMFAG00000046074CLP19975.870Macaca_fascicularis
ENSGAFG00000003020clp19975.870ENSMMUG00000038007CLP19975.402Macaca_mulatta
ENSGAFG00000003020clp19975.870ENSMNEG00000000259CLP19975.870Macaca_nemestrina
ENSGAFG00000003020clp19975.870ENSMLEG00000043556CLP19975.870Mandrillus_leucophaeus
ENSGAFG00000003020clp110095.465ENSMAMG00000002149clp110095.465Mastacembelus_armatus
ENSGAFG00000003020clp110093.878ENSMZEG00005002850clp110093.878Maylandia_zebra
ENSGAFG00000003020clp19975.926ENSMGAG00000009643CLP19975.926Meleagris_gallopavo
ENSGAFG00000003020clp19974.537ENSMAUG00000016261Clp19974.537Mesocricetus_auratus
ENSGAFG00000003020clp19975.406ENSMICG00000004895CLP19975.406Microcebus_murinus
ENSGAFG00000003020clp19975.231ENSMOCG00000005498Clp19975.231Microtus_ochrogaster
ENSGAFG00000003020clp110092.744ENSMMOG00000003229clp110092.744Mola_mola
ENSGAFG00000003020clp19975.231ENSMODG00000024148-9975.231Monodelphis_domestica
ENSGAFG00000003020clp19975.231ENSMODG00000020107-9975.231Monodelphis_domestica
ENSGAFG00000003020clp110095.011ENSMALG00000014239clp110095.011Monopterus_albus
ENSGAFG00000003020clp19975.000MGP_CAROLIEiJ_G0023726Clp19975.000Mus_caroli
ENSGAFG00000003020clp19975.000ENSMUSG00000027079Clp19975.000Mus_musculus
ENSGAFG00000003020clp19974.769MGP_PahariEiJ_G0025177Clp19974.769Mus_pahari
ENSGAFG00000003020clp19975.000MGP_SPRETEiJ_G0024646Clp19975.000Mus_spretus
ENSGAFG00000003020clp19975.406ENSMPUG00000000268CLP19975.406Mustela_putorius_furo
ENSGAFG00000003020clp19975.638ENSMLUG00000007904CLP19975.638Myotis_lucifugus
ENSGAFG00000003020clp19975.174ENSNGAG00000006165Clp19975.174Nannospalax_galili
ENSGAFG00000003020clp110094.104ENSNBRG00000005225clp110094.104Neolamprologus_brichardi
ENSGAFG00000003020clp18169.531ENSNLEG00000012809-9969.531Nomascus_leucogenys
ENSGAFG00000003020clp19975.231ENSMEUG00000010949CLP110075.115Notamacropus_eugenii
ENSGAFG00000003020clp17077.228ENSOPRG00000007329CLP110077.228Ochotona_princeps
ENSGAFG00000003020clp19975.638ENSODEG00000011410CLP19975.638Octodon_degus
ENSGAFG00000003020clp110094.331ENSONIG00000005089clp110094.331Oreochromis_niloticus
ENSGAFG00000003020clp19975.406ENSOCUG00000007045CLP19975.406Oryctolagus_cuniculus
ENSGAFG00000003020clp110094.104ENSORLG00000003647clp110094.104Oryzias_latipes
ENSGAFG00000003020clp110093.878ENSORLG00020016676clp110093.878Oryzias_latipes_hni
ENSGAFG00000003020clp110094.104ENSORLG00015019484clp110094.104Oryzias_latipes_hsok
ENSGAFG00000003020clp110094.104ENSOMEG00000021303clp110094.104Oryzias_melastigma
ENSGAFG00000003020clp19975.638ENSOGAG00000004508CLP19975.638Otolemur_garnettii
ENSGAFG00000003020clp19974.942ENSOARG00000010145CLP19974.654Ovis_aries
ENSGAFG00000003020clp19975.870ENSPPAG00000041519CLP19975.870Pan_paniscus
ENSGAFG00000003020clp19975.638ENSPPRG00000006135CLP19975.638Panthera_pardus
ENSGAFG00000003020clp19975.638ENSPTIG00000015866CLP19975.638Panthera_tigris_altaica
ENSGAFG00000003020clp19975.870ENSPTRG00000047318CLP19975.870Pan_troglodytes
ENSGAFG00000003020clp19975.870ENSPANG00000017078CLP19875.402Papio_anubis
ENSGAFG00000003020clp19788.095ENSPKIG00000007697clp110085.169Paramormyrops_kingsleyae
ENSGAFG00000003020clp19472.616ENSPSIG00000005468CLP19972.616Pelodiscus_sinensis
ENSGAFG00000003020clp110092.063ENSPMGG00000012171clp110092.063Periophthalmus_magnuspinnatus
ENSGAFG00000003020clp19975.231ENSPEMG00000011213-9975.231Peromyscus_maniculatus_bairdii
ENSGAFG00000003020clp19767.933ENSPMAG00000006707clp19767.933Petromyzon_marinus
ENSGAFG00000003020clp19975.694ENSPCIG00000011899CLP19975.694Phascolarctos_cinereus
ENSGAFG00000003020clp110099.093ENSPFOG00000008169clp110099.093Poecilia_formosa
ENSGAFG00000003020clp110099.093ENSPLAG00000022388clp110099.093Poecilia_latipinna
ENSGAFG00000003020clp110099.093ENSPMEG00000021088clp110099.093Poecilia_mexicana
ENSGAFG00000003020clp110099.093ENSPREG00000017802clp110099.093Poecilia_reticulata
ENSGAFG00000003020clp15374.236ENSPPYG00000003266-10074.236Pongo_abelii
ENSGAFG00000003020clp19975.406ENSPCOG00000000360CLP19975.172Propithecus_coquereli
ENSGAFG00000003020clp19975.406ENSPVAG00000016270CLP19975.406Pteropus_vampyrus
ENSGAFG00000003020clp110094.104ENSPNYG00000017274clp19994.104Pundamilia_nyererei
ENSGAFG00000003020clp19788.180ENSPNAG00000026460clp110085.045Pygocentrus_nattereri
ENSGAFG00000003020clp19975.000ENSRNOG00000007416Clp19975.000Rattus_norvegicus
ENSGAFG00000003020clp19975.870ENSRBIG00000018191CLP19975.870Rhinopithecus_bieti
ENSGAFG00000003020clp19975.870ENSRROG00000039265CLP19975.870Rhinopithecus_roxellana
ENSGAFG00000003020clp19563.043ENSSBOG00000010558-9363.043Saimiri_boliviensis_boliviensis
ENSGAFG00000003020clp19975.870ENSSBOG00000032517-9975.870Saimiri_boliviensis_boliviensis
ENSGAFG00000003020clp19975.463ENSSHAG00000015695CLP19975.463Sarcophilus_harrisii
ENSGAFG00000003020clp110083.002ENSSFOG00015000628clp110083.002Scleropages_formosus
ENSGAFG00000003020clp110094.104ENSSMAG00000019423clp19994.104Scophthalmus_maximus
ENSGAFG00000003020clp110094.331ENSSDUG00000014495clp110094.331Seriola_dumerili
ENSGAFG00000003020clp110094.104ENSSLDG00000000937clp110094.104Seriola_lalandi_dorsalis
ENSGAFG00000003020clp15273.684ENSSARG00000002459CLP110073.684Sorex_araneus
ENSGAFG00000003020clp19975.000ENSSPUG00000016811CLP19975.000Sphenodon_punctatus
ENSGAFG00000003020clp110094.104ENSSPAG00000016052clp110094.104Stegastes_partitus
ENSGAFG00000003020clp19975.406ENSSSCG00000031442CLP19975.406Sus_scrofa
ENSGAFG00000003020clp19975.463ENSTGUG00000007002CLP19975.463Taeniopygia_guttata
ENSGAFG00000003020clp110090.345ENSTRUG00000012602clp110090.023Takifugu_rubripes
ENSGAFG00000003020clp110090.930ENSTNIG00000013125clp110090.930Tetraodon_nigroviridis
ENSGAFG00000003020clp19974.942ENSTBEG00000009975CLP19974.942Tupaia_belangeri
ENSGAFG00000003020clp19975.406ENSTTRG00000002096CLP19975.406Tursiops_truncatus
ENSGAFG00000003020clp19975.406ENSUAMG00000011388CLP19975.406Ursus_americanus
ENSGAFG00000003020clp19975.406ENSUMAG00000018317CLP19975.406Ursus_maritimus
ENSGAFG00000003020clp19975.406ENSVVUG00000017138CLP19974.376Vulpes_vulpes
ENSGAFG00000003020clp19972.120ENSXETG00000007088clp19772.286Xenopus_tropicalis
ENSGAFG00000003020clp110099.773ENSXCOG00000002287clp110099.773Xiphophorus_couchianus
ENSGAFG00000003020clp110099.773ENSXMAG00000009783clp110099.773Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us