EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000003211 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 15537 bases
Position: chrNHOQ01002355.1:6363970-6379506
Accession: ZDB-GENE-060503-321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000004711	MA3	PF02847.17	3.1e-23	1	1
ENSGAFP00000004711	MIF4G	PF02854.19	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000004768	-	6598	-	ENSGAFP00000004711	829 (aa)	-	UPI000DD1C1A9

Gene Model

Click here to download ENSGAFG00000003211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003211	nom1	97	54.612	ENSG00000146909	NOM1	63	66.300	Homo_sapiens
ENSGAFG00000003211	nom1	64	87.242	ENSAPOG00000012073	nom1	66	84.902	Acanthochromis_polyacanthus
ENSGAFG00000003211	nom1	81	57.598	ENSAMEG00000001412	NOM1	72	64.952	Ailuropoda_melanoleuca
ENSGAFG00000003211	nom1	98	73.374	ENSACIG00000018050	nom1	98	73.562	Amphilophus_citrinellus
ENSGAFG00000003211	nom1	64	86.116	ENSAOCG00000006229	nom1	98	73.460	Amphiprion_ocellaris
ENSGAFG00000003211	nom1	64	86.304	ENSAPEG00000015994	nom1	98	73.571	Amphiprion_percula
ENSGAFG00000003211	nom1	98	75.245	ENSATEG00000005405	nom1	98	74.786	Anabas_testudineus
ENSGAFG00000003211	nom1	78	58.432	ENSAPLG00000006585	NOM1	88	62.630	Anas_platyrhynchos
ENSGAFG00000003211	nom1	72	60.691	ENSACAG00000011192	NOM1	62	65.356	Anolis_carolinensis
ENSGAFG00000003211	nom1	98	73.519	ENSACLG00000000033	nom1	98	73.918	Astatotilapia_calliptera
ENSGAFG00000003211	nom1	64	75.094	ENSAMXG00000041486	nom1	63	73.810	Astyanax_mexicanus
ENSGAFG00000003211	nom1	97	51.745	ENSBTAG00000016435	NOM1	63	62.915	Bos_taurus
ENSGAFG00000003211	nom1	97	54.655	ENSCJAG00000004336	NOM1	95	54.293	Callithrix_jacchus
ENSGAFG00000003211	nom1	97	52.906	ENSCAFG00020005121	NOM1	60	65.259	Canis_lupus_dingo
ENSGAFG00000003211	nom1	81	57.394	ENSCHIG00000020102	NOM1	62	64.368	Capra_hircus
ENSGAFG00000003211	nom1	96	55.006	ENSTSYG00000000227	NOM1	62	67.050	Carlito_syrichta
ENSGAFG00000003211	nom1	62	67.630	ENSCAPG00000016273	NOM1	99	67.630	Cavia_aperea
ENSGAFG00000003211	nom1	99	52.123	ENSCPOG00000025538	NOM1	96	51.807	Cavia_porcellus
ENSGAFG00000003211	nom1	89	67.381	ENSCCAG00000014944	NOM1	99	67.330	Cebus_capucinus
ENSGAFG00000003211	nom1	84	58.182	ENSCLAG00000000267	NOM1	63	65.121	Chinchilla_lanigera
ENSGAFG00000003211	nom1	72	66.856	ENSCPBG00000018215	NOM1	81	66.856	Chrysemys_picta_bellii
ENSGAFG00000003211	nom1	86	36.690	ENSCING00000005248	-	76	39.254	Ciona_intestinalis
ENSGAFG00000003211	nom1	62	67.500	ENSCANG00000041984	NOM1	89	67.500	Colobus_angolensis_palliatus
ENSGAFG00000003211	nom1	81	59.265	ENSCGRG00001020293	Nom1	96	53.390	Cricetulus_griseus_chok1gshd
ENSGAFG00000003211	nom1	62	66.667	ENSCGRG00000005405	Nom1	97	66.667	Cricetulus_griseus_crigri
ENSGAFG00000003211	nom1	94	69.975	ENSCSEG00000000932	nom1	98	66.425	Cynoglossus_semilaevis
ENSGAFG00000003211	nom1	100	80.262	ENSCVAG00000007562	nom1	100	80.143	Cyprinodon_variegatus
ENSGAFG00000003211	nom1	99	62.679	ENSDARG00000060027	nom1	100	74.538	Danio_rerio
ENSGAFG00000003211	nom1	62	57.008	ENSDORG00000015682	Nom1	76	57.116	Dipodomys_ordii
ENSGAFG00000003211	nom1	78	36.564	FBgn0035336	CG9004	65	36.364	Drosophila_melanogaster
ENSGAFG00000003211	nom1	91	56.667	ENSETEG00000003104	NOM1	74	56.667	Echinops_telfairi
ENSGAFG00000003211	nom1	52	49.541	ENSEBUG00000010077	nom1	96	49.541	Eptatretus_burgeri
ENSGAFG00000003211	nom1	81	59.884	ENSEASG00005001489	NOM1	61	67.754	Equus_asinus_asinus
ENSGAFG00000003211	nom1	62	67.562	ENSECAG00000007596	NOM1	56	67.562	Equus_caballus
ENSGAFG00000003211	nom1	66	76.044	ENSELUG00000006266	nom1	98	63.872	Esox_lucius
ENSGAFG00000003211	nom1	80	56.835	ENSFCAG00000006467	NOM1	63	65.511	Felis_catus
ENSGAFG00000003211	nom1	80	58.884	ENSFALG00000006904	NOM1	79	65.474	Ficedula_albicollis
ENSGAFG00000003211	nom1	99	51.716	ENSFDAG00000016241	NOM1	63	65.577	Fukomys_damarensis
ENSGAFG00000003211	nom1	100	80.215	ENSFHEG00000015974	nom1	100	79.619	Fundulus_heteroclitus
ENSGAFG00000003211	nom1	94	60.025	ENSGMOG00000005129	nom1	99	59.601	Gadus_morhua
ENSGAFG00000003211	nom1	86	56.552	ENSGALG00000006437	NOM1	92	51.132	Gallus_gallus
ENSGAFG00000003211	nom1	98	52.392	ENSGAGG00000014347	NOM1	82	66.667	Gopherus_agassizii
ENSGAFG00000003211	nom1	65	65.934	ENSGGOG00000010920	NOM1	89	54.064	Gorilla_gorilla
ENSGAFG00000003211	nom1	98	73.697	ENSHBUG00000014616	nom1	98	73.855	Haplochromis_burtoni
ENSGAFG00000003211	nom1	98	53.381	ENSHGLG00000007392	NOM1	60	67.308	Heterocephalus_glaber_female
ENSGAFG00000003211	nom1	86	68.269	ENSHGLG00100014407	NOM1	60	67.308	Heterocephalus_glaber_male
ENSGAFG00000003211	nom1	64	71.023	ENSIPUG00000013980	nom1	98	58.153	Ictalurus_punctatus
ENSGAFG00000003211	nom1	69	62.349	ENSSTOG00000031736	NOM1	91	67.308	Ictidomys_tridecemlineatus
ENSGAFG00000003211	nom1	59	68.041	ENSJJAG00000011716	Nom1	98	68.041	Jaculus_jaculus
ENSGAFG00000003211	nom1	100	68.512	ENSLBEG00000009252	nom1	100	71.247	Labrus_bergylta
ENSGAFG00000003211	nom1	83	61.254	ENSLACG00000011777	NOM1	98	56.250	Latimeria_chalumnae
ENSGAFG00000003211	nom1	98	61.621	ENSLOCG00000012452	nom1	100	61.705	Lepisosteus_oculatus
ENSGAFG00000003211	nom1	97	48.916	ENSLAFG00000007119	NOM1	63	60.769	Loxodonta_africana
ENSGAFG00000003211	nom1	97	50.837	ENSMMUG00000039033	NOM1	61	62.132	Macaca_mulatta
ENSGAFG00000003211	nom1	62	67.692	ENSMLEG00000037062	NOM1	98	67.692	Mandrillus_leucophaeus
ENSGAFG00000003211	nom1	98	71.243	ENSMAMG00000004118	nom1	98	71.106	Mastacembelus_armatus
ENSGAFG00000003211	nom1	98	73.398	ENSMZEG00005000384	nom1	98	73.798	Maylandia_zebra
ENSGAFG00000003211	nom1	82	58.032	ENSMGAG00000005051	NOM1	99	57.835	Meleagris_gallopavo
ENSGAFG00000003211	nom1	97	53.939	ENSMAUG00000017988	Nom1	95	53.650	Mesocricetus_auratus
ENSGAFG00000003211	nom1	97	53.790	ENSMICG00000017531	NOM1	62	65.962	Microcebus_murinus
ENSGAFG00000003211	nom1	99	53.278	ENSMOCG00000015962	Nom1	61	66.538	Microtus_ochrogaster
ENSGAFG00000003211	nom1	99	67.654	ENSMMOG00000004419	nom1	98	67.063	Mola_mola
ENSGAFG00000003211	nom1	66	68.066	ENSMODG00000005177	NOM1	64	68.066	Monodelphis_domestica
ENSGAFG00000003211	nom1	93	72.471	ENSMALG00000008800	nom1	98	71.502	Monopterus_albus
ENSGAFG00000003211	nom1	97	52.913	MGP_CAROLIEiJ_G0027043	Nom1	61	65.703	Mus_caroli
ENSGAFG00000003211	nom1	97	53.584	ENSMUSG00000001569	Nom1	62	64.312	Mus_musculus
ENSGAFG00000003211	nom1	97	53.212	MGP_SPRETEiJ_G0028039	Nom1	62	64.312	Mus_spretus
ENSGAFG00000003211	nom1	81	55.783	ENSMPUG00000009745	NOM1	75	63.340	Mustela_putorius_furo
ENSGAFG00000003211	nom1	70	62.139	ENSMLUG00000009129	NOM1	92	63.978	Myotis_lucifugus
ENSGAFG00000003211	nom1	98	74.788	ENSNBRG00000016429	nom1	95	84.470	Neolamprologus_brichardi
ENSGAFG00000003211	nom1	62	65.900	ENSNLEG00000000238	NOM1	97	51.809	Nomascus_leucogenys
ENSGAFG00000003211	nom1	69	56.086	ENSMEUG00000001108	NOM1	80	53.107	Notamacropus_eugenii
ENSGAFG00000003211	nom1	81	58.102	ENSODEG00000009399	NOM1	75	64.818	Octodon_degus
ENSGAFG00000003211	nom1	94	74.779	ENSONIG00000005958	nom1	99	74.685	Oreochromis_niloticus
ENSGAFG00000003211	nom1	56	66.882	ENSOANG00000006139	-	97	66.882	Ornithorhynchus_anatinus
ENSGAFG00000003211	nom1	97	54.469	ENSOCUG00000004071	-	97	53.635	Oryctolagus_cuniculus
ENSGAFG00000003211	nom1	94	45.247	ENSOCUG00000021448	-	71	53.728	Oryctolagus_cuniculus
ENSGAFG00000003211	nom1	99	70.036	ENSORLG00000010541	nom1	98	70.205	Oryzias_latipes
ENSGAFG00000003211	nom1	93	70.551	ENSORLG00020010789	nom1	100	71.301	Oryzias_latipes_hni
ENSGAFG00000003211	nom1	100	70.344	ENSORLG00015010475	nom1	100	71.319	Oryzias_latipes_hsok
ENSGAFG00000003211	nom1	99	70.853	ENSOMEG00000004219	nom1	98	71.669	Oryzias_melastigma
ENSGAFG00000003211	nom1	62	68.462	ENSOGAG00000001124	NOM1	85	68.462	Otolemur_garnettii
ENSGAFG00000003211	nom1	81	57.185	ENSOARG00000007261	NOM1	70	64.299	Ovis_aries
ENSGAFG00000003211	nom1	81	60.000	ENSPPAG00000041374	NOM1	63	65.751	Pan_paniscus
ENSGAFG00000003211	nom1	80	56.484	ENSPTIG00000013532	NOM1	71	65.192	Panthera_tigris_altaica
ENSGAFG00000003211	nom1	81	60.145	ENSPTRG00000019917	NOM1	63	65.751	Pan_troglodytes
ENSGAFG00000003211	nom1	97	54.152	ENSPANG00000007605	NOM1	95	54.796	Papio_anubis
ENSGAFG00000003211	nom1	99	58.893	ENSPKIG00000005825	nom1	98	59.587	Paramormyrops_kingsleyae
ENSGAFG00000003211	nom1	63	67.235	ENSPSIG00000017848	NOM1	88	67.235	Pelodiscus_sinensis
ENSGAFG00000003211	nom1	98	70.158	ENSPMGG00000002577	nom1	98	70.184	Periophthalmus_magnuspinnatus
ENSGAFG00000003211	nom1	97	53.959	ENSPEMG00000024180	Nom1	95	53.212	Peromyscus_maniculatus_bairdii
ENSGAFG00000003211	nom1	65	66.913	ENSPCIG00000027941	NOM1	60	66.913	Phascolarctos_cinereus
ENSGAFG00000003211	nom1	100	93.120	ENSPFOG00000015771	nom1	100	93.238	Poecilia_formosa
ENSGAFG00000003211	nom1	67	94.840	ENSPLAG00000007856	nom1	100	91.597	Poecilia_latipinna
ENSGAFG00000003211	nom1	100	93.001	ENSPMEG00000014155	nom1	100	93.120	Poecilia_mexicana
ENSGAFG00000003211	nom1	100	94.358	ENSPREG00000008850	nom1	100	94.598	Poecilia_reticulata
ENSGAFG00000003211	nom1	97	50.543	ENSPPYG00000018222	NOM1	96	50.059	Pongo_abelii
ENSGAFG00000003211	nom1	76	62.093	ENSPCAG00000000440	NOM1	78	62.093	Procavia_capensis
ENSGAFG00000003211	nom1	62	66.538	ENSPCOG00000015222	NOM1	98	66.538	Propithecus_coquereli
ENSGAFG00000003211	nom1	97	52.015	ENSPVAG00000014760	NOM1	95	52.048	Pteropus_vampyrus
ENSGAFG00000003211	nom1	98	73.277	ENSPNYG00000006975	nom1	97	83.178	Pundamilia_nyererei
ENSGAFG00000003211	nom1	66	71.455	ENSPNAG00000011085	nom1	63	70.789	Pygocentrus_nattereri
ENSGAFG00000003211	nom1	97	50.363	ENSRNOG00000048969	AABR07059041.1	64	61.657	Rattus_norvegicus
ENSGAFG00000003211	nom1	97	53.606	ENSRBIG00000037042	NOM1	95	54.022	Rhinopithecus_bieti
ENSGAFG00000003211	nom1	97	53.486	ENSRROG00000037293	NOM1	95	53.902	Rhinopithecus_roxellana
ENSGAFG00000003211	nom1	66	67.518	ENSSHAG00000017998	-	80	67.336	Sarcophilus_harrisii
ENSGAFG00000003211	nom1	50	61.501	ENSSHAG00000002835	-	99	61.501	Sarcophilus_harrisii
ENSGAFG00000003211	nom1	59	72.222	ENSSFOG00015003196	nom1	100	72.222	Scleropages_formosus
ENSGAFG00000003211	nom1	99	72.515	ENSSMAG00000011047	nom1	98	72.879	Scophthalmus_maximus
ENSGAFG00000003211	nom1	100	73.857	ENSSDUG00000006834	nom1	100	74.235	Seriola_dumerili
ENSGAFG00000003211	nom1	100	73.498	ENSSLDG00000021812	nom1	100	73.373	Seriola_lalandi_dorsalis
ENSGAFG00000003211	nom1	86	47.473	ENSSPUG00000002556	NOM1	100	52.469	Sphenodon_punctatus
ENSGAFG00000003211	nom1	100	74.368	ENSSPAG00000000953	nom1	66	84.303	Stegastes_partitus
ENSGAFG00000003211	nom1	80	59.124	ENSTGUG00000000702	-	78	65.448	Taeniopygia_guttata
ENSGAFG00000003211	nom1	98	69.212	ENSTRUG00000010239	nom1	98	68.606	Takifugu_rubripes
ENSGAFG00000003211	nom1	98	68.873	ENSTNIG00000012783	nom1	100	69.051	Tetraodon_nigroviridis
ENSGAFG00000003211	nom1	80	58.789	ENSTTRG00000009691	NOM1	61	66.148	Tursiops_truncatus
ENSGAFG00000003211	nom1	81	57.536	ENSUAMG00000025450	NOM1	60	64.818	Ursus_americanus
ENSGAFG00000003211	nom1	81	58.580	ENSUMAG00000014275	NOM1	78	63.419	Ursus_maritimus
ENSGAFG00000003211	nom1	74	66.359	ENSVVUG00000002608	NOM1	95	66.359	Vulpes_vulpes
ENSGAFG00000003211	nom1	85	56.250	ENSXETG00000021611	nom1	82	72.683	Xenopus_tropicalis
ENSGAFG00000003211	nom1	100	96.386	ENSXMAG00000002451	nom1	100	96.386	Xiphophorus_maculatus