EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000003390 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3638 bases
Position: chrNHOQ01002481.1:1479605-1483242
Accession: ZDB-GENE-120411-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000004978	PseudoU_synth_2	PF00849.22	1.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005036	-	1638	-	ENSGAFP00000004978	545 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003390	rpusd2	81	59.251	ENSG00000166133	RPUSD2	82	59.251	Homo_sapiens
ENSGAFG00000003390	rpusd2	97	68.512	ENSAPOG00000000817	rpusd2	100	68.512	Acanthochromis_polyacanthus
ENSGAFG00000003390	rpusd2	88	55.488	ENSAMEG00000016996	RPUSD2	89	55.488	Ailuropoda_melanoleuca
ENSGAFG00000003390	rpusd2	85	80.720	ENSACIG00000024029	rpusd2	95	80.720	Amphilophus_citrinellus
ENSGAFG00000003390	rpusd2	96	68.348	ENSAOCG00000015237	rpusd2	99	68.348	Amphiprion_ocellaris
ENSGAFG00000003390	rpusd2	96	67.826	ENSAPEG00000021763	rpusd2	99	67.826	Amphiprion_percula
ENSGAFG00000003390	rpusd2	93	70.939	ENSATEG00000015242	rpusd2	92	70.939	Anabas_testudineus
ENSGAFG00000003390	rpusd2	75	61.557	ENSAPLG00000004723	RPUSD2	100	61.557	Anas_platyrhynchos
ENSGAFG00000003390	rpusd2	78	60.938	ENSACAG00000013893	RPUSD2	96	59.402	Anolis_carolinensis
ENSGAFG00000003390	rpusd2	88	56.619	ENSANAG00000009691	RPUSD2	89	56.619	Aotus_nancymaae
ENSGAFG00000003390	rpusd2	97	67.759	ENSACLG00000019531	rpusd2	100	67.759	Astatotilapia_calliptera
ENSGAFG00000003390	rpusd2	78	64.948	ENSAMXG00000013376	rpusd2	88	62.617	Astyanax_mexicanus
ENSGAFG00000003390	rpusd2	81	59.251	ENSBTAG00000003193	RPUSD2	81	59.251	Bos_taurus
ENSGAFG00000003390	rpusd2	71	36.082	WBGene00019498	K07E8.7	97	36.082	Caenorhabditis_elegans
ENSGAFG00000003390	rpusd2	81	59.471	ENSCJAG00000020841	RPUSD2	82	59.471	Callithrix_jacchus
ENSGAFG00000003390	rpusd2	81	58.370	ENSCAFG00000009165	RPUSD2	81	58.370	Canis_familiaris
ENSGAFG00000003390	rpusd2	81	58.370	ENSCAFG00020005849	RPUSD2	81	58.370	Canis_lupus_dingo
ENSGAFG00000003390	rpusd2	85	56.667	ENSCHIG00000006152	RPUSD2	85	56.667	Capra_hircus
ENSGAFG00000003390	rpusd2	81	58.811	ENSTSYG00000012844	RPUSD2	83	58.811	Carlito_syrichta
ENSGAFG00000003390	rpusd2	88	55.984	ENSCPOG00000013201	RPUSD2	89	55.984	Cavia_porcellus
ENSGAFG00000003390	rpusd2	86	57.292	ENSCCAG00000024378	RPUSD2	87	57.292	Cebus_capucinus
ENSGAFG00000003390	rpusd2	81	59.031	ENSCATG00000043734	RPUSD2	82	59.031	Cercocebus_atys
ENSGAFG00000003390	rpusd2	86	56.785	ENSCLAG00000011862	RPUSD2	87	56.785	Chinchilla_lanigera
ENSGAFG00000003390	rpusd2	81	59.471	ENSCSAG00000007538	RPUSD2	88	59.471	Chlorocebus_sabaeus
ENSGAFG00000003390	rpusd2	60	56.322	ENSCHOG00000004834	RPUSD2	63	56.812	Choloepus_hoffmanni
ENSGAFG00000003390	rpusd2	81	58.144	ENSCPBG00000013419	RPUSD2	91	58.144	Chrysemys_picta_bellii
ENSGAFG00000003390	rpusd2	63	35.756	ENSCSAVG00000007812	-	99	35.756	Ciona_savignyi
ENSGAFG00000003390	rpusd2	81	59.031	ENSCANG00000003659	RPUSD2	82	59.031	Colobus_angolensis_palliatus
ENSGAFG00000003390	rpusd2	82	58.643	ENSCGRG00001009839	Rpusd2	79	58.643	Cricetulus_griseus_chok1gshd
ENSGAFG00000003390	rpusd2	82	58.643	ENSCGRG00000012348	Rpusd2	82	58.643	Cricetulus_griseus_crigri
ENSGAFG00000003390	rpusd2	85	71.224	ENSCSEG00000001953	rpusd2	84	71.224	Cynoglossus_semilaevis
ENSGAFG00000003390	rpusd2	97	78.481	ENSCVAG00000010848	rpusd2	100	78.481	Cyprinodon_variegatus
ENSGAFG00000003390	rpusd2	87	67.710	ENSDARG00000060992	rpusd2	86	67.710	Danio_rerio
ENSGAFG00000003390	rpusd2	85	56.846	ENSDNOG00000047745	RPUSD2	87	56.846	Dasypus_novemcinctus
ENSGAFG00000003390	rpusd2	77	60.185	ENSDORG00000009092	Rpusd2	99	60.185	Dipodomys_ordii
ENSGAFG00000003390	rpusd2	74	47.368	FBgn0032256	RluA-2	77	47.368	Drosophila_melanogaster
ENSGAFG00000003390	rpusd2	75	44.708	FBgn0051719	RluA-1	62	44.708	Drosophila_melanogaster
ENSGAFG00000003390	rpusd2	82	57.872	ENSETEG00000008581	RPUSD2	87	57.872	Echinops_telfairi
ENSGAFG00000003390	rpusd2	74	33.649	ENSEBUG00000012149	rpusd2	83	33.649	Eptatretus_burgeri
ENSGAFG00000003390	rpusd2	84	57.143	ENSEASG00005016463	RPUSD2	83	57.143	Equus_asinus_asinus
ENSGAFG00000003390	rpusd2	84	57.143	ENSECAG00000024178	RPUSD2	83	57.143	Equus_caballus
ENSGAFG00000003390	rpusd2	92	47.901	ENSEEUG00000005132	RPUSD2	98	47.901	Erinaceus_europaeus
ENSGAFG00000003390	rpusd2	93	64.140	ENSELUG00000016786	rpusd2	98	64.140	Esox_lucius
ENSGAFG00000003390	rpusd2	85	56.184	ENSFCAG00000040796	RPUSD2	85	56.184	Felis_catus
ENSGAFG00000003390	rpusd2	76	61.839	ENSFALG00000001122	RPUSD2	97	62.247	Ficedula_albicollis
ENSGAFG00000003390	rpusd2	86	57.261	ENSFDAG00000003070	RPUSD2	93	57.261	Fukomys_damarensis
ENSGAFG00000003390	rpusd2	97	78.662	ENSFHEG00000007518	rpusd2	100	78.662	Fundulus_heteroclitus
ENSGAFG00000003390	rpusd2	86	69.715	ENSGMOG00000011014	rpusd2	99	69.715	Gadus_morhua
ENSGAFG00000003390	rpusd2	81	58.910	ENSGALG00000041216	RPUSD2	96	58.910	Gallus_gallus
ENSGAFG00000003390	rpusd2	88	73.152	ENSGACG00000008656	rpusd2	97	73.152	Gasterosteus_aculeatus
ENSGAFG00000003390	rpusd2	86	59.267	ENSGAGG00000013098	RPUSD2	95	59.267	Gopherus_agassizii
ENSGAFG00000003390	rpusd2	81	59.031	ENSGGOG00000006684	RPUSD2	82	59.031	Gorilla_gorilla
ENSGAFG00000003390	rpusd2	97	67.912	ENSHBUG00000023777	rpusd2	100	67.912	Haplochromis_burtoni
ENSGAFG00000003390	rpusd2	86	57.411	ENSHGLG00000012765	RPUSD2	87	57.411	Heterocephalus_glaber_female
ENSGAFG00000003390	rpusd2	86	57.411	ENSHGLG00100006653	RPUSD2	87	57.411	Heterocephalus_glaber_male
ENSGAFG00000003390	rpusd2	95	67.075	ENSHCOG00000015587	rpusd2	97	67.075	Hippocampus_comes
ENSGAFG00000003390	rpusd2	83	71.190	ENSIPUG00000021006	rpusd2	81	71.190	Ictalurus_punctatus
ENSGAFG00000003390	rpusd2	82	59.524	ENSSTOG00000025619	RPUSD2	82	59.524	Ictidomys_tridecemlineatus
ENSGAFG00000003390	rpusd2	78	61.503	ENSJJAG00000023160	Rpusd2	84	60.965	Jaculus_jaculus
ENSGAFG00000003390	rpusd2	97	68.847	ENSKMAG00000006618	rpusd2	99	69.019	Kryptolebias_marmoratus
ENSGAFG00000003390	rpusd2	86	74.059	ENSLBEG00000021571	rpusd2	87	74.059	Labrus_bergylta
ENSGAFG00000003390	rpusd2	77	59.121	ENSLACG00000017338	RPUSD2	99	59.121	Latimeria_chalumnae
ENSGAFG00000003390	rpusd2	78	69.248	ENSLOCG00000014755	rpusd2	93	68.966	Lepisosteus_oculatus
ENSGAFG00000003390	rpusd2	88	56.162	ENSLAFG00000015588	RPUSD2	91	56.162	Loxodonta_africana
ENSGAFG00000003390	rpusd2	81	59.179	ENSMFAG00000045062	RPUSD2	82	59.179	Macaca_fascicularis
ENSGAFG00000003390	rpusd2	81	59.179	ENSMMUG00000001483	RPUSD2	82	59.179	Macaca_mulatta
ENSGAFG00000003390	rpusd2	81	51.288	ENSMNEG00000041429	RPUSD2	82	51.288	Macaca_nemestrina
ENSGAFG00000003390	rpusd2	60	57.895	ENSMLEG00000036551	RPUSD2	81	57.895	Mandrillus_leucophaeus
ENSGAFG00000003390	rpusd2	93	68.357	ENSMAMG00000001077	rpusd2	93	68.357	Mastacembelus_armatus
ENSGAFG00000003390	rpusd2	85	75.697	ENSMZEG00005006947	rpusd2	95	75.697	Maylandia_zebra
ENSGAFG00000003390	rpusd2	79	62.556	ENSMGAG00000003058	RPUSD2	97	62.556	Meleagris_gallopavo
ENSGAFG00000003390	rpusd2	85	57.684	ENSMAUG00000020467	Rpusd2	84	57.684	Mesocricetus_auratus
ENSGAFG00000003390	rpusd2	86	57.054	ENSMICG00000028637	RPUSD2	86	57.054	Microcebus_murinus
ENSGAFG00000003390	rpusd2	85	58.368	ENSMOCG00000020061	Rpusd2	84	58.368	Microtus_ochrogaster
ENSGAFG00000003390	rpusd2	85	79.794	ENSMMOG00000012020	rpusd2	93	74.528	Mola_mola
ENSGAFG00000003390	rpusd2	81	60.173	ENSMODG00000000300	RPUSD2	83	60.173	Monodelphis_domestica
ENSGAFG00000003390	rpusd2	92	66.372	ENSMALG00000010024	rpusd2	94	66.372	Monopterus_albus
ENSGAFG00000003390	rpusd2	99	52.072	MGP_CAROLIEiJ_G0024130	Rpusd2	96	52.072	Mus_caroli
ENSGAFG00000003390	rpusd2	82	58.785	ENSMUSG00000027324	Rpusd2	81	58.785	Mus_musculus
ENSGAFG00000003390	rpusd2	85	57.983	MGP_PahariEiJ_G0025573	Rpusd2	85	57.983	Mus_pahari
ENSGAFG00000003390	rpusd2	82	58.824	MGP_SPRETEiJ_G0025046	Rpusd2	82	58.824	Mus_spretus
ENSGAFG00000003390	rpusd2	82	57.872	ENSMPUG00000008517	RPUSD2	82	57.872	Mustela_putorius_furo
ENSGAFG00000003390	rpusd2	81	59.121	ENSMLUG00000007971	RPUSD2	89	59.121	Myotis_lucifugus
ENSGAFG00000003390	rpusd2	85	59.408	ENSNGAG00000014126	Rpusd2	85	59.408	Nannospalax_galili
ENSGAFG00000003390	rpusd2	97	70.683	ENSNBRG00000010070	rpusd2	100	70.683	Neolamprologus_brichardi
ENSGAFG00000003390	rpusd2	81	59.471	ENSNLEG00000035735	RPUSD2	82	59.471	Nomascus_leucogenys
ENSGAFG00000003390	rpusd2	86	58.642	ENSMEUG00000008500	RPUSD2	92	58.642	Notamacropus_eugenii
ENSGAFG00000003390	rpusd2	86	57.620	ENSOPRG00000014177	-	87	57.620	Ochotona_princeps
ENSGAFG00000003390	rpusd2	80	59.333	ENSODEG00000017193	RPUSD2	83	59.333	Octodon_degus
ENSGAFG00000003390	rpusd2	87	79.461	ENSONIG00000020102	rpusd2	96	79.461	Oreochromis_niloticus
ENSGAFG00000003390	rpusd2	81	59.560	ENSOCUG00000015745	RPUSD2	80	59.560	Oryctolagus_cuniculus
ENSGAFG00000003390	rpusd2	97	67.942	ENSORLG00000015516	rpusd2	99	67.942	Oryzias_latipes
ENSGAFG00000003390	rpusd2	97	67.636	ENSORLG00020010533	rpusd2	99	67.636	Oryzias_latipes_hni
ENSGAFG00000003390	rpusd2	97	67.210	ENSORLG00015009206	rpusd2	99	67.210	Oryzias_latipes_hsok
ENSGAFG00000003390	rpusd2	97	71.009	ENSOMEG00000007355	rpusd2	91	71.009	Oryzias_melastigma
ENSGAFG00000003390	rpusd2	81	58.643	ENSOGAG00000004867	RPUSD2	86	58.643	Otolemur_garnettii
ENSGAFG00000003390	rpusd2	78	59.637	ENSOARG00000020235	RPUSD2	97	53.096	Ovis_aries
ENSGAFG00000003390	rpusd2	81	59.251	ENSPPAG00000032874	RPUSD2	82	59.251	Pan_paniscus
ENSGAFG00000003390	rpusd2	88	54.786	ENSPPRG00000010446	RPUSD2	89	54.786	Panthera_pardus
ENSGAFG00000003390	rpusd2	86	55.833	ENSPTIG00000013316	RPUSD2	86	55.833	Panthera_tigris_altaica
ENSGAFG00000003390	rpusd2	81	59.251	ENSPTRG00000006924	RPUSD2	82	59.251	Pan_troglodytes
ENSGAFG00000003390	rpusd2	81	59.251	ENSPANG00000019339	RPUSD2	82	59.251	Papio_anubis
ENSGAFG00000003390	rpusd2	84	74.742	ENSPKIG00000023017	rpusd2	81	74.742	Paramormyrops_kingsleyae
ENSGAFG00000003390	rpusd2	61	60.172	ENSPSIG00000012680	RPUSD2	100	60.172	Pelodiscus_sinensis
ENSGAFG00000003390	rpusd2	85	76.242	ENSPMGG00000018165	rpusd2	84	76.242	Periophthalmus_magnuspinnatus
ENSGAFG00000003390	rpusd2	82	58.606	ENSPEMG00000012878	Rpusd2	85	58.606	Peromyscus_maniculatus_bairdii
ENSGAFG00000003390	rpusd2	81	61.400	ENSPCIG00000023199	RPUSD2	82	61.400	Phascolarctos_cinereus
ENSGAFG00000003390	rpusd2	99	91.743	ENSPFOG00000006829	rpusd2	100	91.743	Poecilia_formosa
ENSGAFG00000003390	rpusd2	88	92.946	ENSPLAG00000022914	rpusd2	100	92.946	Poecilia_latipinna
ENSGAFG00000003390	rpusd2	99	91.560	ENSPMEG00000009835	rpusd2	100	93.154	Poecilia_mexicana
ENSGAFG00000003390	rpusd2	100	91.985	ENSPREG00000016441	rpusd2	97	91.985	Poecilia_reticulata
ENSGAFG00000003390	rpusd2	81	59.251	ENSPPYG00000006355	RPUSD2	82	59.251	Pongo_abelii
ENSGAFG00000003390	rpusd2	96	51.872	ENSPCOG00000028019	RPUSD2	99	51.872	Propithecus_coquereli
ENSGAFG00000003390	rpusd2	85	56.468	ENSPVAG00000001837	RPUSD2	85	56.468	Pteropus_vampyrus
ENSGAFG00000003390	rpusd2	85	80.810	ENSPNYG00000021507	rpusd2	94	80.810	Pundamilia_nyererei
ENSGAFG00000003390	rpusd2	85	57.563	ENSRNOG00000010528	LOC100911166	85	57.563	Rattus_norvegicus
ENSGAFG00000003390	rpusd2	85	57.563	ENSRNOG00000046797	Rpusd2	85	57.563	Rattus_norvegicus
ENSGAFG00000003390	rpusd2	81	59.471	ENSRBIG00000030813	RPUSD2	82	59.471	Rhinopithecus_bieti
ENSGAFG00000003390	rpusd2	81	59.251	ENSRROG00000026664	RPUSD2	82	59.251	Rhinopithecus_roxellana
ENSGAFG00000003390	rpusd2	50	46.403	YDL036C	-	79	37.713	Saccharomyces_cerevisiae
ENSGAFG00000003390	rpusd2	72	37.685	YOL066C	RIB2	61	37.685	Saccharomyces_cerevisiae
ENSGAFG00000003390	rpusd2	81	59.912	ENSSBOG00000035031	RPUSD2	87	57.469	Saimiri_boliviensis_boliviensis
ENSGAFG00000003390	rpusd2	61	58.824	ENSSHAG00000015108	RPUSD2	90	58.824	Sarcophilus_harrisii
ENSGAFG00000003390	rpusd2	84	65.517	ENSSFOG00015019057	rpusd2	80	65.826	Scleropages_formosus
ENSGAFG00000003390	rpusd2	88	71.402	ENSSMAG00000000903	rpusd2	95	74.751	Scophthalmus_maximus
ENSGAFG00000003390	rpusd2	97	66.942	ENSSDUG00000019139	rpusd2	100	66.942	Seriola_dumerili
ENSGAFG00000003390	rpusd2	97	65.124	ENSSLDG00000005938	rpusd2	100	65.124	Seriola_lalandi_dorsalis
ENSGAFG00000003390	rpusd2	84	57.320	ENSSARG00000002792	RPUSD2	88	57.320	Sorex_araneus
ENSGAFG00000003390	rpusd2	84	56.936	ENSSPUG00000001206	RPUSD2	94	56.936	Sphenodon_punctatus
ENSGAFG00000003390	rpusd2	97	69.983	ENSSPAG00000003578	rpusd2	100	69.983	Stegastes_partitus
ENSGAFG00000003390	rpusd2	81	59.202	ENSSSCG00000036700	RPUSD2	81	59.202	Sus_scrofa
ENSGAFG00000003390	rpusd2	88	71.834	ENSTRUG00000025880	rpusd2	99	72.779	Takifugu_rubripes
ENSGAFG00000003390	rpusd2	84	77.778	ENSTNIG00000017329	rpusd2	95	77.778	Tetraodon_nigroviridis
ENSGAFG00000003390	rpusd2	81	52.308	ENSTBEG00000007933	RPUSD2	82	52.308	Tupaia_belangeri
ENSGAFG00000003390	rpusd2	81	58.315	ENSTTRG00000010585	RPUSD2	83	58.315	Tursiops_truncatus
ENSGAFG00000003390	rpusd2	86	56.757	ENSUAMG00000001470	RPUSD2	93	56.757	Ursus_americanus
ENSGAFG00000003390	rpusd2	86	56.757	ENSUMAG00000012487	RPUSD2	76	56.757	Ursus_maritimus
ENSGAFG00000003390	rpusd2	86	56.584	ENSVPAG00000003844	RPUSD2	86	56.584	Vicugna_pacos
ENSGAFG00000003390	rpusd2	81	58.370	ENSVVUG00000026590	RPUSD2	81	58.370	Vulpes_vulpes
ENSGAFG00000003390	rpusd2	82	59.829	ENSXETG00000015973	rpusd2	99	59.829	Xenopus_tropicalis
ENSGAFG00000003390	rpusd2	99	94.824	ENSXMAG00000021821	rpusd2	100	95.397	Xiphophorus_maculatus