EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000003391 (Gene tree)
Gene ID: -
Gene Symbol: zgc:66448
Alias: fi06b05|wu:fi06b05
Full Name: zgc:66448
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10221 bases
Position: chrNHOQ01000034.1:4782192-4792412
Accession: ZDB-GENE-030131-5612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000004965	zf-C2H2	PF00096.26	6.1e-47	1	6
ENSGAFP00000004965	zf-C2H2	PF00096.26	6.1e-47	2	6
ENSGAFP00000004965	zf-C2H2	PF00096.26	6.1e-47	3	6
ENSGAFP00000004965	zf-C2H2	PF00096.26	6.1e-47	4	6
ENSGAFP00000004965	zf-C2H2	PF00096.26	6.1e-47	5	6
ENSGAFP00000004965	zf-C2H2	PF00096.26	6.1e-47	6	6
ENSGAFP00000004975	zf-C2H2	PF00096.26	1.2e-46	1	6
ENSGAFP00000004975	zf-C2H2	PF00096.26	1.2e-46	2	6
ENSGAFP00000004975	zf-C2H2	PF00096.26	1.2e-46	3	6
ENSGAFP00000004975	zf-C2H2	PF00096.26	1.2e-46	4	6
ENSGAFP00000004975	zf-C2H2	PF00096.26	1.2e-46	5	6
ENSGAFP00000004975	zf-C2H2	PF00096.26	1.2e-46	6	6
ENSGAFP00000004965	zf-met	PF12874.7	3.7e-09	1	1
ENSGAFP00000004975	zf-met	PF12874.7	7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005033	-	5913	-	ENSGAFP00000004975	1276 (aa)	-	-
ENSGAFT00000005023	-	5953	-	ENSGAFP00000004965	1232 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000003391	zgc:66448	54	34.359	ENSGAFG00000012934	-	95	34.359
ENSGAFG00000003391	zgc:66448	50	40.336	ENSGAFG00000013000	-	63	40.336
ENSGAFG00000003391	zgc:66448	59	32.028	ENSGAFG00000016976	-	60	32.028
ENSGAFG00000003391	zgc:66448	50	37.500	ENSGAFG00000003150	-	89	37.500
ENSGAFG00000003391	zgc:66448	52	34.266	ENSGAFG00000011938	-	70	34.266
ENSGAFG00000003391	zgc:66448	51	30.451	ENSGAFG00000013408	-	87	30.451
ENSGAFG00000003391	zgc:66448	52	39.053	ENSGAFG00000013677	-	92	35.979
ENSGAFG00000003391	zgc:66448	50	35.000	ENSGAFG00000013019	-	85	37.725
ENSGAFG00000003391	zgc:66448	52	32.342	ENSGAFG00000013363	-	75	32.365
ENSGAFG00000003391	zgc:66448	50	37.281	ENSGAFG00000014362	-	58	37.445
ENSGAFG00000003391	zgc:66448	50	37.415	ENSGAFG00000014369	-	97	42.384
ENSGAFG00000003391	zgc:66448	50	41.304	ENSGAFG00000019072	-	93	41.304
ENSGAFG00000003391	zgc:66448	50	37.838	ENSGAFG00000017066	-	64	37.838
ENSGAFG00000003391	zgc:66448	50	38.119	ENSGAFG00000011884	-	97	42.703
ENSGAFG00000003391	zgc:66448	51	36.548	ENSGAFG00000014188	-	97	40.719
ENSGAFG00000003391	zgc:66448	50	32.377	ENSGAFG00000018302	-	88	36.702
ENSGAFG00000003391	zgc:66448	50	36.041	ENSGAFG00000011944	-	62	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003391	zgc:66448	51	33.924	ENSAPOG00000003666	-	97	39.073	Acanthochromis_polyacanthus
ENSGAFG00000003391	zgc:66448	51	45.977	ENSAPOG00000004628	-	98	43.077	Acanthochromis_polyacanthus
ENSGAFG00000003391	zgc:66448	54	39.634	ENSAMEG00000007611	-	100	35.732	Ailuropoda_melanoleuca
ENSGAFG00000003391	zgc:66448	50	30.926	ENSAOCG00000022079	-	76	30.926	Amphiprion_ocellaris
ENSGAFG00000003391	zgc:66448	52	30.000	ENSAPEG00000016118	-	97	39.189	Amphiprion_percula
ENSGAFG00000003391	zgc:66448	52	30.108	ENSACLG00000007749	-	76	35.345	Astatotilapia_calliptera
ENSGAFG00000003391	zgc:66448	51	32.343	ENSACLG00000023941	-	86	30.909	Astatotilapia_calliptera
ENSGAFG00000003391	zgc:66448	50	33.773	ENSACLG00000017939	-	99	42.169	Astatotilapia_calliptera
ENSGAFG00000003391	zgc:66448	57	31.376	ENSACLG00000000537	-	95	44.242	Astatotilapia_calliptera
ENSGAFG00000003391	zgc:66448	54	37.415	ENSAMXG00000033299	-	83	33.149	Astyanax_mexicanus
ENSGAFG00000003391	zgc:66448	63	53.647	ENSAMXG00000036663	zgc:66448	86	39.587	Astyanax_mexicanus
ENSGAFG00000003391	zgc:66448	52	33.276	ENSCAFG00000028550	-	95	33.039	Canis_familiaris
ENSGAFG00000003391	zgc:66448	50	32.174	ENSCPBG00000001181	-	99	44.079	Chrysemys_picta_bellii
ENSGAFG00000003391	zgc:66448	51	42.143	ENSCSAVG00000000673	-	100	43.030	Ciona_savignyi
ENSGAFG00000003391	zgc:66448	59	44.499	ENSDARG00000022952	zgc:66448	58	44.254	Danio_rerio
ENSGAFG00000003391	zgc:66448	54	30.680	ENSECAG00000020668	-	98	35.644	Equus_caballus
ENSGAFG00000003391	zgc:66448	50	30.453	ENSELUG00000021499	-	96	33.582	Esox_lucius
ENSGAFG00000003391	zgc:66448	74	43.655	ENSIPUG00000002548	zgc:66448	91	40.829	Ictalurus_punctatus
ENSGAFG00000003391	zgc:66448	100	70.281	ENSKMAG00000014091	zgc:66448	100	70.281	Kryptolebias_marmoratus
ENSGAFG00000003391	zgc:66448	50	38.728	ENSLBEG00000013570	-	99	38.587	Labrus_bergylta
ENSGAFG00000003391	zgc:66448	55	35.872	ENSLAFG00000031653	-	97	49.390	Loxodonta_africana
ENSGAFG00000003391	zgc:66448	52	42.604	ENSMZEG00005014355	-	97	42.236	Maylandia_zebra
ENSGAFG00000003391	zgc:66448	51	43.195	ENSMZEG00005022718	-	97	41.096	Maylandia_zebra
ENSGAFG00000003391	zgc:66448	51	31.271	ENSMMOG00000004134	-	89	42.763	Mola_mola
ENSGAFG00000003391	zgc:66448	53	40.553	ENSMALG00000007812	-	94	42.021	Monopterus_albus
ENSGAFG00000003391	zgc:66448	50	30.543	ENSMALG00000001487	-	82	32.432	Monopterus_albus
ENSGAFG00000003391	zgc:66448	50	36.585	ENSNBRG00000008106	-	98	36.585	Neolamprologus_brichardi
ENSGAFG00000003391	zgc:66448	50	40.237	ENSNBRG00000014088	-	97	49.206	Neolamprologus_brichardi
ENSGAFG00000003391	zgc:66448	100	61.416	ENSORLG00015018781	zgc:66448	100	61.585	Oryzias_latipes_hsok
ENSGAFG00000003391	zgc:66448	100	61.498	ENSOMEG00000010575	zgc:66448	100	61.807	Oryzias_melastigma
ENSGAFG00000003391	zgc:66448	51	36.607	ENSPMGG00000002229	-	51	40.000	Periophthalmus_magnuspinnatus
ENSGAFG00000003391	zgc:66448	100	64.318	ENSSMAG00000001305	zgc:66448	100	64.318	Scophthalmus_maximus
ENSGAFG00000003391	zgc:66448	52	32.833	ENSVVUG00000002015	-	95	32.734	Vulpes_vulpes
ENSGAFG00000003391	zgc:66448	100	95.227	ENSXMAG00000022364	zgc:66448	100	95.618	Xiphophorus_maculatus