EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000003459 (Gene tree)
Gene ID: -
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex%2C subunit 3b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 29061 bases
Position: chrNHOQ01000064.1:2855881-2884941
Accession: ZDB-GENE-030131-5838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005147	Not3	PF04065.15	1.4e-94	1	1
ENSGAFP00000005129	Not3	PF04065.15	1.7e-94	1	1
ENSGAFP00000005129	NOT2_3_5	PF04153.18	8.1e-40	1	1
ENSGAFP00000005147	NOT2_3_5	PF04153.18	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005186	-	6221	-	ENSGAFP00000005129	905 (aa)	-	-
ENSGAFT00000005205	-	2550	-	ENSGAFP00000005147	849 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003459	cnot3b	75	73.604	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSGAFG00000003459	cnot3b	65	93.151	ENSAPOG00000015002	cnot3b	96	93.151	Acanthochromis_polyacanthus
ENSGAFG00000003459	cnot3b	57	78.495	ENSAPOG00000015499	CNOT3	87	78.495	Acanthochromis_polyacanthus
ENSGAFG00000003459	cnot3b	68	88.487	ENSAMEG00000004528	CNOT3	73	88.197	Ailuropoda_melanoleuca
ENSGAFG00000003459	cnot3b	78	87.967	ENSACIG00000006635	cnot3a	78	91.441	Amphilophus_citrinellus
ENSGAFG00000003459	cnot3b	67	93.304	ENSACIG00000003652	cnot3b	75	94.545	Amphilophus_citrinellus
ENSGAFG00000003459	cnot3b	97	74.111	ENSAOCG00000018385	-	98	79.699	Amphiprion_ocellaris
ENSGAFG00000003459	cnot3b	97	75.805	ENSAPEG00000002640	cnot3b	100	75.721	Amphiprion_percula
ENSGAFG00000003459	cnot3b	100	63.074	ENSATEG00000022737	cnot3a	100	64.920	Anabas_testudineus
ENSGAFG00000003459	cnot3b	100	81.750	ENSATEG00000015777	cnot3b	100	81.323	Anabas_testudineus
ENSGAFG00000003459	cnot3b	71	74.908	ENSACAG00000016085	CNOT3	87	89.145	Anolis_carolinensis
ENSGAFG00000003459	cnot3b	75	74.112	ENSANAG00000025756	CNOT3	75	88.525	Aotus_nancymaae
ENSGAFG00000003459	cnot3b	100	79.914	ENSACLG00000016702	cnot3b	100	79.677	Astatotilapia_calliptera
ENSGAFG00000003459	cnot3b	100	67.742	ENSAMXG00000012359	cnot3a	100	67.880	Astyanax_mexicanus
ENSGAFG00000003459	cnot3b	100	68.042	ENSAMXG00000009447	cnot3b	97	90.860	Astyanax_mexicanus
ENSGAFG00000003459	cnot3b	68	88.816	ENSBTAG00000014900	CNOT3	73	88.525	Bos_taurus
ENSGAFG00000003459	cnot3b	53	41.748	WBGene00003826	ntl-3	79	58.333	Caenorhabditis_elegans
ENSGAFG00000003459	cnot3b	75	74.112	ENSCJAG00000001094	CNOT3	72	88.525	Callithrix_jacchus
ENSGAFG00000003459	cnot3b	75	73.604	ENSCAFG00000002699	CNOT3	72	88.525	Canis_familiaris
ENSGAFG00000003459	cnot3b	75	73.604	ENSCAFG00020018359	CNOT3	72	88.525	Canis_lupus_dingo
ENSGAFG00000003459	cnot3b	62	86.799	ENSCHIG00000015302	CNOT3	74	86.513	Capra_hircus
ENSGAFG00000003459	cnot3b	84	66.272	ENSTSYG00000008058	CNOT3	73	88.525	Carlito_syrichta
ENSGAFG00000003459	cnot3b	73	79.437	ENSCAPG00000009533	CNOT3	72	88.525	Cavia_aperea
ENSGAFG00000003459	cnot3b	75	73.165	ENSCPOG00000020741	CNOT3	72	88.525	Cavia_porcellus
ENSGAFG00000003459	cnot3b	62	88.530	ENSCCAG00000036290	CNOT3	75	88.525	Cebus_capucinus
ENSGAFG00000003459	cnot3b	75	73.604	ENSCATG00000030324	CNOT3	72	88.525	Cercocebus_atys
ENSGAFG00000003459	cnot3b	75	73.096	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSGAFG00000003459	cnot3b	75	73.858	ENSCSAG00000001900	CNOT3	72	88.525	Chlorocebus_sabaeus
ENSGAFG00000003459	cnot3b	91	66.568	ENSCPBG00000011655	CNOT3	87	89.836	Chrysemys_picta_bellii
ENSGAFG00000003459	cnot3b	96	50.130	ENSCING00000000293	-	68	70.721	Ciona_intestinalis
ENSGAFG00000003459	cnot3b	75	73.604	ENSCANG00000013408	CNOT3	72	88.525	Colobus_angolensis_palliatus
ENSGAFG00000003459	cnot3b	82	69.289	ENSCGRG00001000855	Cnot3	72	88.852	Cricetulus_griseus_chok1gshd
ENSGAFG00000003459	cnot3b	88	81.900	ENSCSEG00000016892	cnot3b	100	77.686	Cynoglossus_semilaevis
ENSGAFG00000003459	cnot3b	100	90.088	ENSCVAG00000022122	cnot3b	100	90.529	Cyprinodon_variegatus
ENSGAFG00000003459	cnot3b	100	68.649	ENSDARG00000019842	cnot3b	100	69.848	Danio_rerio
ENSGAFG00000003459	cnot3b	100	65.330	ENSDARG00000007135	cnot3a	100	67.316	Danio_rerio
ENSGAFG00000003459	cnot3b	68	88.487	ENSDNOG00000045972	CNOT3	73	88.197	Dasypus_novemcinctus
ENSGAFG00000003459	cnot3b	62	88.530	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSGAFG00000003459	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	60	100.000	Echinops_telfairi
ENSGAFG00000003459	cnot3b	61	69.481	ENSEBUG00000010437	cnot3a	71	69.008	Eptatretus_burgeri
ENSGAFG00000003459	cnot3b	75	73.858	ENSEASG00005021591	CNOT3	72	88.525	Equus_asinus_asinus
ENSGAFG00000003459	cnot3b	75	73.858	ENSECAG00000023181	CNOT3	72	88.525	Equus_caballus
ENSGAFG00000003459	cnot3b	100	61.627	ENSELUG00000014743	cnot3a	100	63.495	Esox_lucius
ENSGAFG00000003459	cnot3b	100	71.353	ENSELUG00000000953	cnot3b	100	70.693	Esox_lucius
ENSGAFG00000003459	cnot3b	75	74.112	ENSFCAG00000014042	CNOT3	73	88.525	Felis_catus
ENSGAFG00000003459	cnot3b	100	90.196	ENSFHEG00000001696	cnot3b	100	90.414	Fundulus_heteroclitus
ENSGAFG00000003459	cnot3b	100	62.311	ENSFHEG00000023166	cnot3a	73	91.892	Fundulus_heteroclitus
ENSGAFG00000003459	cnot3b	94	60.661	ENSGMOG00000005365	cnot3a	98	61.374	Gadus_morhua
ENSGAFG00000003459	cnot3b	68	87.234	ENSGACG00000009395	cnot3b	82	87.234	Gasterosteus_aculeatus
ENSGAFG00000003459	cnot3b	85	64.798	ENSGAGG00000012677	CNOT3	85	87.156	Gopherus_agassizii
ENSGAFG00000003459	cnot3b	75	73.604	ENSGGOG00000012996	CNOT3	75	88.525	Gorilla_gorilla
ENSGAFG00000003459	cnot3b	99	70.919	ENSHBUG00000019699	cnot3b	99	72.403	Haplochromis_burtoni
ENSGAFG00000003459	cnot3b	68	88.816	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSGAFG00000003459	cnot3b	60	81.226	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSGAFG00000003459	cnot3b	86	75.000	ENSIPUG00000000167	cnot3	100	61.946	Ictalurus_punctatus
ENSGAFG00000003459	cnot3b	100	66.630	ENSIPUG00000009046	cnot3b	100	64.853	Ictalurus_punctatus
ENSGAFG00000003459	cnot3b	68	88.816	ENSSTOG00000028248	CNOT3	73	88.525	Ictidomys_tridecemlineatus
ENSGAFG00000003459	cnot3b	75	74.365	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSGAFG00000003459	cnot3b	100	63.455	ENSKMAG00000004863	cnot3a	100	79.208	Kryptolebias_marmoratus
ENSGAFG00000003459	cnot3b	100	83.931	ENSKMAG00000018723	cnot3b	100	85.575	Kryptolebias_marmoratus
ENSGAFG00000003459	cnot3b	66	87.008	ENSLBEG00000017296	cnot3a	87	77.027	Labrus_bergylta
ENSGAFG00000003459	cnot3b	96	78.764	ENSLBEG00000018278	cnot3b	99	78.924	Labrus_bergylta
ENSGAFG00000003459	cnot3b	68	90.132	ENSLACG00000009742	CNOT3	87	89.251	Latimeria_chalumnae
ENSGAFG00000003459	cnot3b	54	92.857	ENSLOCG00000000005	cnot3b	79	92.857	Lepisosteus_oculatus
ENSGAFG00000003459	cnot3b	75	73.418	ENSLAFG00000022133	CNOT3	72	87.582	Loxodonta_africana
ENSGAFG00000003459	cnot3b	75	73.858	ENSMFAG00000040073	CNOT3	72	88.525	Macaca_fascicularis
ENSGAFG00000003459	cnot3b	60	89.076	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSGAFG00000003459	cnot3b	75	73.604	ENSMNEG00000036750	CNOT3	72	88.525	Macaca_nemestrina
ENSGAFG00000003459	cnot3b	75	73.604	ENSMLEG00000036579	CNOT3	72	88.525	Mandrillus_leucophaeus
ENSGAFG00000003459	cnot3b	100	81.458	ENSMAMG00000019357	cnot3b	100	81.565	Mastacembelus_armatus
ENSGAFG00000003459	cnot3b	100	80.496	ENSMZEG00005002466	cnot3b	100	80.475	Maylandia_zebra
ENSGAFG00000003459	cnot3b	75	74.112	ENSMAUG00000014996	Cnot3	73	88.852	Mesocricetus_auratus
ENSGAFG00000003459	cnot3b	70	84.663	ENSMICG00000002370	CNOT3	72	88.816	Microcebus_murinus
ENSGAFG00000003459	cnot3b	70	89.744	ENSMMOG00000013086	cnot3b	52	91.892	Mola_mola
ENSGAFG00000003459	cnot3b	50	60.259	ENSMMOG00000016446	cnot3a	100	63.695	Mola_mola
ENSGAFG00000003459	cnot3b	68	78.423	ENSMODG00000004066	CNOT3	73	88.525	Monodelphis_domestica
ENSGAFG00000003459	cnot3b	100	63.901	ENSMALG00000009204	cnot3a	100	64.781	Monopterus_albus
ENSGAFG00000003459	cnot3b	73	89.130	ENSMALG00000004936	cnot3b	100	85.185	Monopterus_albus
ENSGAFG00000003459	cnot3b	75	74.425	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSGAFG00000003459	cnot3b	75	74.425	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSGAFG00000003459	cnot3b	75	74.680	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSGAFG00000003459	cnot3b	75	74.425	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSGAFG00000003459	cnot3b	75	73.737	ENSMPUG00000010352	CNOT3	72	88.525	Mustela_putorius_furo
ENSGAFG00000003459	cnot3b	75	73.096	ENSNGAG00000013266	Cnot3	73	88.525	Nannospalax_galili
ENSGAFG00000003459	cnot3b	96	69.586	ENSNBRG00000003336	cnot3b	97	89.720	Neolamprologus_brichardi
ENSGAFG00000003459	cnot3b	61	88.398	ENSNLEG00000006272	CNOT3	83	88.525	Nomascus_leucogenys
ENSGAFG00000003459	cnot3b	75	73.418	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSGAFG00000003459	cnot3b	100	81.210	ENSONIG00000007047	cnot3b	100	81.749	Oreochromis_niloticus
ENSGAFG00000003459	cnot3b	100	62.527	ENSONIG00000006568	cnot3a	100	65.213	Oreochromis_niloticus
ENSGAFG00000003459	cnot3b	75	74.112	ENSOCUG00000007691	CNOT3	73	88.525	Oryctolagus_cuniculus
ENSGAFG00000003459	cnot3b	100	80.326	ENSORLG00000005982	cnot3b	100	80.958	Oryzias_latipes
ENSGAFG00000003459	cnot3b	100	79.457	ENSORLG00020005779	cnot3b	100	80.217	Oryzias_latipes_hni
ENSGAFG00000003459	cnot3b	100	78.896	ENSORLG00015019021	cnot3b	100	81.169	Oryzias_latipes_hsok
ENSGAFG00000003459	cnot3b	100	81.481	ENSOMEG00000015557	cnot3b	100	81.937	Oryzias_melastigma
ENSGAFG00000003459	cnot3b	93	79.832	ENSOMEG00000010309	cnot3a	100	64.135	Oryzias_melastigma
ENSGAFG00000003459	cnot3b	75	74.684	ENSOGAG00000006945	CNOT3	73	88.525	Otolemur_garnettii
ENSGAFG00000003459	cnot3b	63	64.309	ENSOARG00000002981	CNOT3	66	83.732	Ovis_aries
ENSGAFG00000003459	cnot3b	75	73.604	ENSPPAG00000002748	CNOT3	75	88.525	Pan_paniscus
ENSGAFG00000003459	cnot3b	75	74.112	ENSPPRG00000011705	CNOT3	73	88.525	Panthera_pardus
ENSGAFG00000003459	cnot3b	62	88.926	ENSPTIG00000008781	CNOT3	92	88.926	Panthera_tigris_altaica
ENSGAFG00000003459	cnot3b	75	73.604	ENSPTRG00000046717	-	75	88.525	Pan_troglodytes
ENSGAFG00000003459	cnot3b	75	73.604	ENSPTRG00000011444	CNOT3	75	88.525	Pan_troglodytes
ENSGAFG00000003459	cnot3b	75	73.604	ENSPANG00000009375	CNOT3	72	88.525	Papio_anubis
ENSGAFG00000003459	cnot3b	91	82.308	ENSPKIG00000011733	CNOT3	100	62.721	Paramormyrops_kingsleyae
ENSGAFG00000003459	cnot3b	97	64.667	ENSPKIG00000015967	-	97	95.495	Paramormyrops_kingsleyae
ENSGAFG00000003459	cnot3b	98	67.182	ENSPMGG00000022539	cnot3b	99	67.760	Periophthalmus_magnuspinnatus
ENSGAFG00000003459	cnot3b	75	73.858	ENSPEMG00000024185	Cnot3	72	88.852	Peromyscus_maniculatus_bairdii
ENSGAFG00000003459	cnot3b	68	89.145	ENSPCIG00000023018	CNOT3	90	88.889	Phascolarctos_cinereus
ENSGAFG00000003459	cnot3b	75	86.093	ENSPFOG00000008693	cnot3a	96	63.675	Poecilia_formosa
ENSGAFG00000003459	cnot3b	100	96.796	ENSPFOG00000007168	cnot3b	100	96.796	Poecilia_formosa
ENSGAFG00000003459	cnot3b	100	96.796	ENSPLAG00000013457	cnot3b	100	96.796	Poecilia_latipinna
ENSGAFG00000003459	cnot3b	100	96.906	ENSPMEG00000010184	cnot3b	100	96.906	Poecilia_mexicana
ENSGAFG00000003459	cnot3b	65	86.694	ENSPREG00000007592	cnot3a	80	86.694	Poecilia_reticulata
ENSGAFG00000003459	cnot3b	99	91.368	ENSPREG00000000662	cnot3b	97	91.368	Poecilia_reticulata
ENSGAFG00000003459	cnot3b	51	92.810	ENSPREG00000000766	-	100	92.810	Poecilia_reticulata
ENSGAFG00000003459	cnot3b	75	73.350	ENSPPYG00000010372	CNOT3	72	88.197	Pongo_abelii
ENSGAFG00000003459	cnot3b	54	95.763	ENSPCAG00000011999	CNOT3	56	95.763	Procavia_capensis
ENSGAFG00000003459	cnot3b	75	74.112	ENSPCOG00000017673	CNOT3	75	88.525	Propithecus_coquereli
ENSGAFG00000003459	cnot3b	75	73.096	ENSPVAG00000015564	CNOT3	70	87.869	Pteropus_vampyrus
ENSGAFG00000003459	cnot3b	99	71.676	ENSPNYG00000003358	cnot3b	99	71.753	Pundamilia_nyererei
ENSGAFG00000003459	cnot3b	87	80.634	ENSPNAG00000017679	cnot3a	100	66.809	Pygocentrus_nattereri
ENSGAFG00000003459	cnot3b	100	70.098	ENSPNAG00000027459	cnot3b	100	70.964	Pygocentrus_nattereri
ENSGAFG00000003459	cnot3b	75	74.680	ENSRNOG00000053234	Cnot3	85	88.852	Rattus_norvegicus
ENSGAFG00000003459	cnot3b	75	74.112	ENSRBIG00000031025	CNOT3	72	88.525	Rhinopithecus_bieti
ENSGAFG00000003459	cnot3b	75	74.365	ENSRROG00000003872	CNOT3	73	88.525	Rhinopithecus_roxellana
ENSGAFG00000003459	cnot3b	75	74.112	ENSSBOG00000030268	CNOT3	75	88.525	Saimiri_boliviensis_boliviensis
ENSGAFG00000003459	cnot3b	100	69.783	ENSSFOG00015000248	cnot3	89	82.432	Scleropages_formosus
ENSGAFG00000003459	cnot3b	100	68.099	ENSSFOG00015019203	-	100	68.461	Scleropages_formosus
ENSGAFG00000003459	cnot3b	100	78.807	ENSSMAG00000016031	cnot3b	100	79.596	Scophthalmus_maximus
ENSGAFG00000003459	cnot3b	100	82.051	ENSSDUG00000003428	cnot3b	100	82.585	Seriola_dumerili
ENSGAFG00000003459	cnot3b	55	89.744	ENSSDUG00000008181	cnot3a	78	91.892	Seriola_dumerili
ENSGAFG00000003459	cnot3b	100	82.051	ENSSLDG00000014376	cnot3b	100	82.585	Seriola_lalandi_dorsalis
ENSGAFG00000003459	cnot3b	70	78.346	ENSSPUG00000008510	CNOT3	87	89.180	Sphenodon_punctatus
ENSGAFG00000003459	cnot3b	74	86.614	ENSSPAG00000003858	cnot3a	92	86.614	Stegastes_partitus
ENSGAFG00000003459	cnot3b	100	83.459	ENSSPAG00000001429	cnot3b	100	83.459	Stegastes_partitus
ENSGAFG00000003459	cnot3b	75	74.112	ENSSSCG00000003264	CNOT3	72	88.525	Sus_scrofa
ENSGAFG00000003459	cnot3b	100	64.169	ENSTRUG00000015732	cnot3a	100	65.554	Takifugu_rubripes
ENSGAFG00000003459	cnot3b	91	88.971	ENSTRUG00000007248	cnot3b	91	91.099	Takifugu_rubripes
ENSGAFG00000003459	cnot3b	94	73.394	ENSTNIG00000005663	cnot3b	100	74.223	Tetraodon_nigroviridis
ENSGAFG00000003459	cnot3b	68	88.487	ENSUAMG00000005234	CNOT3	73	88.197	Ursus_americanus
ENSGAFG00000003459	cnot3b	60	87.097	ENSUMAG00000010934	CNOT3	82	91.892	Ursus_maritimus
ENSGAFG00000003459	cnot3b	75	73.604	ENSVVUG00000008239	CNOT3	71	88.525	Vulpes_vulpes
ENSGAFG00000003459	cnot3b	100	59.227	ENSXETG00000003166	cnot3	75	87.702	Xenopus_tropicalis
ENSGAFG00000003459	cnot3b	100	61.070	ENSXCOG00000019460	cnot3a	78	91.441	Xiphophorus_couchianus
ENSGAFG00000003459	cnot3b	96	92.571	ENSXCOG00000018976	cnot3b	99	92.571	Xiphophorus_couchianus
ENSGAFG00000003459	cnot3b	100	62.983	ENSXMAG00000012273	cnot3a	100	63.868	Xiphophorus_maculatus
ENSGAFG00000003459	cnot3b	100	97.023	ENSXMAG00000014176	cnot3b	100	97.023	Xiphophorus_maculatus