EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000003461 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7125 bases
Position: chrNHOQ01000199.1:963637-970761
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005091	RRM_1	PF00076.22	7.1e-15	1	1
ENSGAFP00000005085	RRM_1	PF00076.22	8.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005143	-	1474	-	ENSGAFP00000005085	364 (aa)	-	-
ENSGAFT00000005149	-	2455	-	ENSGAFP00000005091	335 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003461	-	65	45.575	ENSG00000152430	BOLL	68	60.000	Homo_sapiens
ENSGAFG00000003461	-	71	44.726	ENSAPOG00000007050	-	85	44.828	Acanthochromis_polyacanthus
ENSGAFG00000003461	-	78	43.223	ENSAMEG00000013712	BOLL	73	45.614	Ailuropoda_melanoleuca
ENSGAFG00000003461	-	96	54.079	ENSAOCG00000023373	-	99	54.079	Amphiprion_ocellaris
ENSGAFG00000003461	-	78	46.125	ENSAPEG00000005335	-	85	50.718	Amphiprion_percula
ENSGAFG00000003461	-	62	30.622	ENSATEG00000001349	dazl	88	30.288	Anabas_testudineus
ENSGAFG00000003461	-	88	39.228	ENSAPLG00000006193	BOLL	87	40.925	Anas_platyrhynchos
ENSGAFG00000003461	-	77	42.751	ENSACAG00000009285	BOLL	71	45.417	Anolis_carolinensis
ENSGAFG00000003461	-	99	49.563	ENSACLG00000002494	-	91	51.466	Astatotilapia_calliptera
ENSGAFG00000003461	-	61	41.364	ENSAMXG00000005058	-	79	42.574	Astyanax_mexicanus
ENSGAFG00000003461	-	65	46.491	ENSBTAG00000031614	BOLL	73	46.491	Bos_taurus
ENSGAFG00000003461	-	65	44.690	ENSCJAG00000004092	BOLL	83	54.225	Callithrix_jacchus
ENSGAFG00000003461	-	65	46.053	ENSCAFG00000010947	BOLL	73	46.053	Canis_familiaris
ENSGAFG00000003461	-	65	46.053	ENSCAFG00020004659	BOLL	74	46.053	Canis_lupus_dingo
ENSGAFG00000003461	-	65	45.575	ENSCHIG00000024995	BOLL	75	45.575	Capra_hircus
ENSGAFG00000003461	-	65	45.455	ENSTSYG00000014204	BOLL	78	53.237	Carlito_syrichta
ENSGAFG00000003461	-	64	41.256	ENSCAPG00000001013	BOLL	84	41.704	Cavia_aperea
ENSGAFG00000003461	-	65	45.374	ENSCPOG00000000390	BOLL	75	46.053	Cavia_porcellus
ENSGAFG00000003461	-	65	45.217	ENSCCAG00000026623	BOLL	73	45.217	Cebus_capucinus
ENSGAFG00000003461	-	65	46.460	ENSCATG00000004430	BOLL	73	46.460	Cercocebus_atys
ENSGAFG00000003461	-	65	46.053	ENSCLAG00000017375	BOLL	77	46.053	Chinchilla_lanigera
ENSGAFG00000003461	-	65	46.460	ENSCSAG00000011399	BOLL	73	46.460	Chlorocebus_sabaeus
ENSGAFG00000003461	-	65	46.018	ENSCANG00000042186	BOLL	76	46.018	Colobus_angolensis_palliatus
ENSGAFG00000003461	-	65	44.493	ENSCGRG00001020168	Boll	74	45.614	Cricetulus_griseus_chok1gshd
ENSGAFG00000003461	-	65	44.493	ENSCGRG00000004549	Boll	76	45.614	Cricetulus_griseus_crigri
ENSGAFG00000003461	-	94	54.717	ENSCVAG00000008027	-	93	56.066	Cyprinodon_variegatus
ENSGAFG00000003461	-	83	40.129	ENSDNOG00000017076	BOLL	88	39.871	Dasypus_novemcinctus
ENSGAFG00000003461	-	65	46.053	ENSDORG00000010791	Boll	77	46.522	Dipodomys_ordii
ENSGAFG00000003461	-	65	44.493	ENSEASG00005020122	BOLL	73	45.614	Equus_asinus_asinus
ENSGAFG00000003461	-	65	44.444	ENSECAG00000040654	BOLL	75	45.575	Equus_caballus
ENSGAFG00000003461	-	81	45.902	ENSELUG00000002317	-	85	45.902	Esox_lucius
ENSGAFG00000003461	-	65	44.053	ENSFCAG00000018564	BOLL	73	45.175	Felis_catus
ENSGAFG00000003461	-	71	40.945	ENSFALG00000004255	BOLL	82	41.085	Ficedula_albicollis
ENSGAFG00000003461	-	65	45.652	ENSFDAG00000013036	BOLL	77	45.652	Fukomys_damarensis
ENSGAFG00000003461	-	84	65.854	ENSFHEG00000000765	-	88	68.199	Fundulus_heteroclitus
ENSGAFG00000003461	-	73	44.656	ENSGACG00000014439	-	90	45.802	Gasterosteus_aculeatus
ENSGAFG00000003461	-	65	45.575	ENSGGOG00000013594	BOLL	79	54.676	Gorilla_gorilla
ENSGAFG00000003461	-	57	30.366	ENSHBUG00000017426	dazl	80	30.366	Haplochromis_burtoni
ENSGAFG00000003461	-	99	49.563	ENSHBUG00000003183	-	91	51.466	Haplochromis_burtoni
ENSGAFG00000003461	-	65	46.053	ENSHGLG00000017562	BOLL	75	46.053	Heterocephalus_glaber_female
ENSGAFG00000003461	-	65	46.053	ENSHGLG00100015094	BOLL	77	46.053	Heterocephalus_glaber_male
ENSGAFG00000003461	-	83	37.778	ENSIPUG00000021346	boll	88	37.423	Ictalurus_punctatus
ENSGAFG00000003461	-	65	46.053	ENSSTOG00000003536	BOLL	77	46.053	Ictidomys_tridecemlineatus
ENSGAFG00000003461	-	65	46.087	ENSJJAG00000015508	Boll	77	46.087	Jaculus_jaculus
ENSGAFG00000003461	-	51	30.851	ENSKMAG00000019443	dazl	75	31.500	Kryptolebias_marmoratus
ENSGAFG00000003461	-	96	49.085	ENSKMAG00000002689	-	89	49.186	Kryptolebias_marmoratus
ENSGAFG00000003461	-	96	39.045	ENSLACG00000015867	BOLL	87	40.836	Latimeria_chalumnae
ENSGAFG00000003461	-	80	34.276	ENSLOCG00000004003	BOLL	96	34.276	Lepisosteus_oculatus
ENSGAFG00000003461	-	65	45.614	ENSLAFG00000010956	BOLL	76	46.087	Loxodonta_africana
ENSGAFG00000003461	-	65	46.460	ENSMFAG00000030962	BOLL	76	46.460	Macaca_fascicularis
ENSGAFG00000003461	-	65	46.460	ENSMMUG00000023811	BOLL	77	46.460	Macaca_mulatta
ENSGAFG00000003461	-	65	46.460	ENSMNEG00000033015	BOLL	78	54.676	Macaca_nemestrina
ENSGAFG00000003461	-	65	46.460	ENSMLEG00000023905	BOLL	76	46.460	Mandrillus_leucophaeus
ENSGAFG00000003461	-	57	31.771	ENSMAMG00000008203	dazl	80	31.771	Mastacembelus_armatus
ENSGAFG00000003461	-	99	49.563	ENSMZEG00005008450	-	91	51.466	Maylandia_zebra
ENSGAFG00000003461	-	65	44.493	ENSMAUG00000008224	Boll	77	45.614	Mesocricetus_auratus
ENSGAFG00000003461	-	65	45.614	ENSMICG00000011845	BOLL	80	54.225	Microcebus_murinus
ENSGAFG00000003461	-	65	44.053	ENSMOCG00000022824	Boll	81	44.583	Microtus_ochrogaster
ENSGAFG00000003461	-	65	45.175	ENSMODG00000012323	BOLL	77	44.583	Monodelphis_domestica
ENSGAFG00000003461	-	98	54.438	ENSMALG00000016791	-	98	53.846	Monopterus_albus
ENSGAFG00000003461	-	65	44.493	ENSMUSG00000025977	Boll	73	56.122	Mus_musculus
ENSGAFG00000003461	-	65	44.934	MGP_PahariEiJ_G0027387	Boll	73	56.122	Mus_pahari
ENSGAFG00000003461	-	63	46.188	ENSMPUG00000007922	BOLL	72	46.188	Mustela_putorius_furo
ENSGAFG00000003461	-	65	46.087	ENSMLUG00000004999	BOLL	73	46.087	Myotis_lucifugus
ENSGAFG00000003461	-	62	30.288	ENSNBRG00000005425	dazl	80	30.366	Neolamprologus_brichardi
ENSGAFG00000003461	-	70	42.500	ENSNBRG00000019918	-	87	42.857	Neolamprologus_brichardi
ENSGAFG00000003461	-	65	46.018	ENSNLEG00000006885	BOLL	79	54.676	Nomascus_leucogenys
ENSGAFG00000003461	-	65	45.133	ENSODEG00000008471	BOLL	76	45.495	Octodon_degus
ENSGAFG00000003461	-	95	50.456	ENSONIG00000015267	-	97	50.000	Oreochromis_niloticus
ENSGAFG00000003461	-	65	46.053	ENSOCUG00000013979	BOLL	74	46.522	Oryctolagus_cuniculus
ENSGAFG00000003461	-	76	46.063	ENSORLG00000025401	boll	57	46.063	Oryzias_latipes
ENSGAFG00000003461	-	97	44.512	ENSOMEG00000007266	-	87	47.368	Oryzias_melastigma
ENSGAFG00000003461	-	65	46.522	ENSOGAG00000007207	BOLL	73	46.522	Otolemur_garnettii
ENSGAFG00000003461	-	65	46.491	ENSOARG00000015644	BOLL	73	46.491	Ovis_aries
ENSGAFG00000003461	-	65	45.575	ENSPPAG00000033757	BOLL	79	54.676	Pan_paniscus
ENSGAFG00000003461	-	65	44.493	ENSPPRG00000007352	BOLL	73	45.614	Panthera_pardus
ENSGAFG00000003461	-	65	44.493	ENSPTIG00000011925	BOLL	73	45.614	Panthera_tigris_altaica
ENSGAFG00000003461	-	65	45.575	ENSPTRG00000012777	BOLL	79	54.676	Pan_troglodytes
ENSGAFG00000003461	-	65	46.460	ENSPANG00000009570	BOLL	73	46.460	Papio_anubis
ENSGAFG00000003461	-	86	41.590	ENSPKIG00000000551	BOLL	90	42.284	Paramormyrops_kingsleyae
ENSGAFG00000003461	-	70	43.820	ENSPSIG00000018004	BOLL	68	45.833	Pelodiscus_sinensis
ENSGAFG00000003461	-	65	44.053	ENSPEMG00000018168	Boll	76	45.175	Peromyscus_maniculatus_bairdii
ENSGAFG00000003461	-	63	42.411	ENSPMAG00000009126	BOLL	72	42.411	Petromyzon_marinus
ENSGAFG00000003461	-	65	43.830	ENSPCIG00000010605	-	77	43.320	Phascolarctos_cinereus
ENSGAFG00000003461	-	59	39.196	ENSPCIG00000029134	-	69	39.196	Phascolarctos_cinereus
ENSGAFG00000003461	-	99	90.120	ENSPFOG00000005602	-	100	90.120	Poecilia_formosa
ENSGAFG00000003461	-	100	97.612	ENSPLAG00000006076	-	100	97.612	Poecilia_latipinna
ENSGAFG00000003461	-	96	86.068	ENSPMEG00000022615	-	99	86.068	Poecilia_mexicana
ENSGAFG00000003461	-	100	97.015	ENSPREG00000012098	-	100	97.015	Poecilia_reticulata
ENSGAFG00000003461	-	65	46.018	ENSPPYG00000013050	BOLL	75	46.018	Pongo_abelii
ENSGAFG00000003461	-	65	37.815	ENSPCOG00000002476	BOLL	63	62.069	Propithecus_coquereli
ENSGAFG00000003461	-	60	38.889	ENSPVAG00000015269	BOLL	77	38.723	Pteropus_vampyrus
ENSGAFG00000003461	-	83	39.286	ENSPNAG00000023174	-	89	39.286	Pygocentrus_nattereri
ENSGAFG00000003461	-	65	44.934	ENSRNOG00000054379	LOC108348134	74	46.053	Rattus_norvegicus
ENSGAFG00000003461	-	65	44.934	ENSRNOG00000015798	Boll	74	46.053	Rattus_norvegicus
ENSGAFG00000003461	-	65	46.460	ENSRBIG00000042131	BOLL	78	46.256	Rhinopithecus_bieti
ENSGAFG00000003461	-	65	46.460	ENSRROG00000016942	BOLL	73	46.460	Rhinopithecus_roxellana
ENSGAFG00000003461	-	65	45.217	ENSSBOG00000027161	BOLL	75	45.217	Saimiri_boliviensis_boliviensis
ENSGAFG00000003461	-	65	45.175	ENSSHAG00000018057	BOLL	83	44.583	Sarcophilus_harrisii
ENSGAFG00000003461	-	86	36.111	ENSSFOG00015023350	boll	91	36.111	Scleropages_formosus
ENSGAFG00000003461	-	62	31.100	ENSSDUG00000005172	dazl	90	30.769	Seriola_dumerili
ENSGAFG00000003461	-	98	54.493	ENSSDUG00000004624	-	98	54.412	Seriola_dumerili
ENSGAFG00000003461	-	67	47.863	ENSSLDG00000003410	-	87	48.718	Seriola_lalandi_dorsalis
ENSGAFG00000003461	-	62	31.100	ENSSLDG00000005485	dazl	90	30.769	Seriola_lalandi_dorsalis
ENSGAFG00000003461	-	65	44.934	ENSSSCG00000016082	BOLL	77	46.053	Sus_scrofa
ENSGAFG00000003461	-	66	43.043	ENSTGUG00000010496	BOLL	80	43.162	Taeniopygia_guttata
ENSGAFG00000003461	-	70	37.247	ENSTRUG00000021705	-	85	37.247	Takifugu_rubripes
ENSGAFG00000003461	-	65	45.575	ENSUAMG00000016037	BOLL	75	45.575	Ursus_americanus
ENSGAFG00000003461	-	65	45.575	ENSUMAG00000020969	BOLL	75	45.575	Ursus_maritimus
ENSGAFG00000003461	-	65	46.053	ENSVVUG00000025901	BOLL	74	46.522	Vulpes_vulpes
ENSGAFG00000003461	-	64	31.193	ENSXETG00000025199	dazl	62	31.193	Xenopus_tropicalis
ENSGAFG00000003461	-	100	98.507	ENSXMAG00000021766	-	100	98.507	Xiphophorus_maculatus