EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000003491 (Gene tree)
Gene ID: -
Gene Symbol: trip4
Alias: im:7143009|si:busm1-221i3.1|si:dkey-173l11.4|zgc:153348
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 79814 bases
Position: chrNHOQ01002268.1:3439944-3519757
Accession: ZDB-GENE-040724-92
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005520	ASCH	PF04266.14	2.8e-20	1	1
ENSGAFP00000005533	ASCH	PF04266.14	3.2e-20	1	1
ENSGAFP00000005514	ASCH	PF04266.14	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005581	-	2070	-	ENSGAFP00000005520	573 (aa)	-	-
ENSGAFT00000005572	-	2108	-	ENSGAFP00000005514	631 (aa)	-	-
ENSGAFT00000005594	-	2611	-	ENSGAFP00000005533	537 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003491	trip4	99	58.966	ENSG00000103671	TRIP4	97	58.966	Homo_sapiens
ENSGAFG00000003491	trip4	99	61.525	ENSAPOG00000023326	trip4	99	62.176	Acanthochromis_polyacanthus
ENSGAFG00000003491	trip4	99	58.854	ENSAMEG00000002591	TRIP4	97	58.854	Ailuropoda_melanoleuca
ENSGAFG00000003491	trip4	96	74.819	ENSACIG00000010577	trip4	99	74.153	Amphilophus_citrinellus
ENSGAFG00000003491	trip4	96	81.467	ENSAOCG00000000395	trip4	90	81.467	Amphiprion_ocellaris
ENSGAFG00000003491	trip4	99	82.867	ENSAPEG00000003621	trip4	99	82.867	Amphiprion_percula
ENSGAFG00000003491	trip4	99	83.217	ENSATEG00000019577	trip4	99	83.392	Anabas_testudineus
ENSGAFG00000003491	trip4	99	59.694	ENSAPLG00000004612	TRIP4	99	61.340	Anas_platyrhynchos
ENSGAFG00000003491	trip4	99	60.481	ENSACAG00000007077	TRIP4	89	60.481	Anolis_carolinensis
ENSGAFG00000003491	trip4	99	58.448	ENSANAG00000027612	TRIP4	97	58.448	Aotus_nancymaae
ENSGAFG00000003491	trip4	99	83.916	ENSACLG00000013819	trip4	99	83.916	Astatotilapia_calliptera
ENSGAFG00000003491	trip4	99	72.251	ENSAMXG00000007270	trip4	100	72.251	Astyanax_mexicanus
ENSGAFG00000003491	trip4	99	59.304	ENSBTAG00000014493	TRIP4	97	59.304	Bos_taurus
ENSGAFG00000003491	trip4	99	58.276	ENSCJAG00000005107	TRIP4	97	58.276	Callithrix_jacchus
ENSGAFG00000003491	trip4	99	58.507	ENSCAFG00000017091	TRIP4	97	58.507	Canis_familiaris
ENSGAFG00000003491	trip4	99	58.507	ENSCAFG00020008960	TRIP4	97	58.507	Canis_lupus_dingo
ENSGAFG00000003491	trip4	96	58.140	ENSCHIG00000023818	TRIP4	98	57.699	Capra_hircus
ENSGAFG00000003491	trip4	98	58.304	ENSTSYG00000007185	TRIP4	97	58.304	Carlito_syrichta
ENSGAFG00000003491	trip4	66	68.421	ENSCAPG00000017624	TRIP4	81	68.421	Cavia_aperea
ENSGAFG00000003491	trip4	99	58.537	ENSCPOG00000006483	TRIP4	97	58.537	Cavia_porcellus
ENSGAFG00000003491	trip4	99	56.620	ENSCCAG00000026483	TRIP4	97	56.620	Cebus_capucinus
ENSGAFG00000003491	trip4	99	59.375	ENSCATG00000041144	TRIP4	97	59.375	Cercocebus_atys
ENSGAFG00000003491	trip4	99	59.348	ENSCLAG00000006872	TRIP4	97	59.348	Chinchilla_lanigera
ENSGAFG00000003491	trip4	99	59.375	ENSCSAG00000012499	TRIP4	97	59.375	Chlorocebus_sabaeus
ENSGAFG00000003491	trip4	76	55.506	ENSCHOG00000010776	TRIP4	76	55.506	Choloepus_hoffmanni
ENSGAFG00000003491	trip4	96	60.568	ENSCPBG00000006093	TRIP4	97	60.823	Chrysemys_picta_bellii
ENSGAFG00000003491	trip4	98	42.833	ENSCSAVG00000005293	-	98	42.833	Ciona_savignyi
ENSGAFG00000003491	trip4	99	56.620	ENSCANG00000033593	TRIP4	97	56.620	Colobus_angolensis_palliatus
ENSGAFG00000003491	trip4	99	59.099	ENSCGRG00001021158	Trip4	97	59.099	Cricetulus_griseus_chok1gshd
ENSGAFG00000003491	trip4	87	59.498	ENSCGRG00000002340	Trip4	97	59.498	Cricetulus_griseus_crigri
ENSGAFG00000003491	trip4	99	79.581	ENSCSEG00000009015	trip4	99	79.756	Cynoglossus_semilaevis
ENSGAFG00000003491	trip4	96	87.259	ENSCVAG00000020984	trip4	99	87.091	Cyprinodon_variegatus
ENSGAFG00000003491	trip4	99	82.210	ENSCVAG00000021094	-	93	82.210	Cyprinodon_variegatus
ENSGAFG00000003491	trip4	99	72.329	ENSDARG00000098074	trip4	100	72.300	Danio_rerio
ENSGAFG00000003491	trip4	99	60.345	ENSDNOG00000008654	TRIP4	97	60.517	Dasypus_novemcinctus
ENSGAFG00000003491	trip4	99	58.276	ENSDORG00000014914	Trip4	97	58.276	Dipodomys_ordii
ENSGAFG00000003491	trip4	77	41.348	FBgn0031115	CG11710	83	41.348	Drosophila_melanogaster
ENSGAFG00000003491	trip4	98	60.384	ENSETEG00000001597	TRIP4	97	60.174	Echinops_telfairi
ENSGAFG00000003491	trip4	99	46.946	ENSEBUG00000009039	trip4	99	48.168	Eptatretus_burgeri
ENSGAFG00000003491	trip4	99	58.854	ENSEASG00005006538	TRIP4	97	58.854	Equus_asinus_asinus
ENSGAFG00000003491	trip4	96	57.795	ENSECAG00000024689	TRIP4	95	57.795	Equus_caballus
ENSGAFG00000003491	trip4	79	62.032	ENSEEUG00000007741	TRIP4	78	62.032	Erinaceus_europaeus
ENSGAFG00000003491	trip4	100	70.261	ENSELUG00000022449	trip4	100	70.261	Esox_lucius
ENSGAFG00000003491	trip4	99	58.763	ENSFCAG00000010618	TRIP4	97	58.763	Felis_catus
ENSGAFG00000003491	trip4	99	60.580	ENSFALG00000009816	TRIP4	99	60.580	Ficedula_albicollis
ENSGAFG00000003491	trip4	99	58.621	ENSFDAG00000017051	TRIP4	97	58.621	Fukomys_damarensis
ENSGAFG00000003491	trip4	99	89.005	ENSFHEG00000015795	trip4	99	89.005	Fundulus_heteroclitus
ENSGAFG00000003491	trip4	99	73.217	ENSGMOG00000008455	trip4	99	73.217	Gadus_morhua
ENSGAFG00000003491	trip4	99	61.197	ENSGALG00000030672	TRIP4	99	61.197	Gallus_gallus
ENSGAFG00000003491	trip4	99	78.313	ENSGACG00000016986	trip4	99	78.313	Gasterosteus_aculeatus
ENSGAFG00000003491	trip4	83	61.807	ENSGAGG00000003671	TRIP4	89	60.558	Gopherus_agassizii
ENSGAFG00000003491	trip4	99	58.966	ENSGGOG00000022608	TRIP4	97	58.966	Gorilla_gorilla
ENSGAFG00000003491	trip4	99	83.916	ENSHBUG00000021071	trip4	99	83.916	Haplochromis_burtoni
ENSGAFG00000003491	trip4	99	58.276	ENSHGLG00000009286	TRIP4	97	58.276	Heterocephalus_glaber_female
ENSGAFG00000003491	trip4	99	58.103	ENSHGLG00100017760	TRIP4	97	58.103	Heterocephalus_glaber_male
ENSGAFG00000003491	trip4	99	78.846	ENSHCOG00000017904	trip4	99	78.846	Hippocampus_comes
ENSGAFG00000003491	trip4	99	70.139	ENSIPUG00000013205	trip4	100	70.660	Ictalurus_punctatus
ENSGAFG00000003491	trip4	99	59.483	ENSSTOG00000014228	TRIP4	97	59.483	Ictidomys_tridecemlineatus
ENSGAFG00000003491	trip4	96	53.501	ENSJJAG00000001629	Trip4	98	53.501	Jaculus_jaculus
ENSGAFG00000003491	trip4	99	83.217	ENSKMAG00000001297	trip4	99	83.217	Kryptolebias_marmoratus
ENSGAFG00000003491	trip4	99	81.993	ENSLBEG00000018354	trip4	99	81.993	Labrus_bergylta
ENSGAFG00000003491	trip4	99	63.194	ENSLACG00000014856	TRIP4	99	63.194	Latimeria_chalumnae
ENSGAFG00000003491	trip4	99	68.229	ENSLOCG00000014993	trip4	99	68.229	Lepisosteus_oculatus
ENSGAFG00000003491	trip4	99	59.828	ENSLAFG00000017612	TRIP4	97	59.828	Loxodonta_africana
ENSGAFG00000003491	trip4	99	59.549	ENSMFAG00000036568	TRIP4	97	59.549	Macaca_fascicularis
ENSGAFG00000003491	trip4	99	59.549	ENSMMUG00000009882	TRIP4	97	59.549	Macaca_mulatta
ENSGAFG00000003491	trip4	99	59.549	ENSMNEG00000033592	TRIP4	97	59.549	Macaca_nemestrina
ENSGAFG00000003491	trip4	99	59.375	ENSMLEG00000027911	TRIP4	97	59.375	Mandrillus_leucophaeus
ENSGAFG00000003491	trip4	99	82.056	ENSMAMG00000013374	trip4	99	82.056	Mastacembelus_armatus
ENSGAFG00000003491	trip4	99	83.916	ENSMZEG00005013450	trip4	99	83.916	Maylandia_zebra
ENSGAFG00000003491	trip4	99	59.828	ENSMICG00000008679	TRIP4	97	59.828	Microcebus_murinus
ENSGAFG00000003491	trip4	99	59.792	ENSMOCG00000012669	Trip4	97	59.792	Microtus_ochrogaster
ENSGAFG00000003491	trip4	97	80.866	ENSMMOG00000002315	trip4	98	80.866	Mola_mola
ENSGAFG00000003491	trip4	99	59.966	ENSMODG00000010743	TRIP4	89	59.966	Monodelphis_domestica
ENSGAFG00000003491	trip4	99	58.997	MGP_CAROLIEiJ_G0032370	Trip4	97	58.997	Mus_caroli
ENSGAFG00000003491	trip4	99	59.170	ENSMUSG00000032386	Trip4	97	59.170	Mus_musculus
ENSGAFG00000003491	trip4	99	57.560	MGP_PahariEiJ_G0015235	Trip4	97	57.560	Mus_pahari
ENSGAFG00000003491	trip4	99	59.099	MGP_SPRETEiJ_G0033509	Trip4	97	59.099	Mus_spretus
ENSGAFG00000003491	trip4	99	58.333	ENSMPUG00000000568	TRIP4	97	58.333	Mustela_putorius_furo
ENSGAFG00000003491	trip4	95	59.857	ENSMLUG00000013367	TRIP4	99	59.857	Myotis_lucifugus
ENSGAFG00000003491	trip4	99	58.773	ENSNGAG00000019566	Trip4	97	58.773	Nannospalax_galili
ENSGAFG00000003491	trip4	97	80.824	ENSNBRG00000020663	trip4	98	81.362	Neolamprologus_brichardi
ENSGAFG00000003491	trip4	99	58.966	ENSNLEG00000012455	TRIP4	97	58.966	Nomascus_leucogenys
ENSGAFG00000003491	trip4	64	56.649	ENSMEUG00000005886	TRIP4	75	56.649	Notamacropus_eugenii
ENSGAFG00000003491	trip4	99	56.799	ENSOPRG00000009512	TRIP4	98	56.799	Ochotona_princeps
ENSGAFG00000003491	trip4	99	57.679	ENSODEG00000016494	TRIP4	97	58.020	Octodon_degus
ENSGAFG00000003491	trip4	96	81.179	ENSONIG00000005703	trip4	99	81.179	Oreochromis_niloticus
ENSGAFG00000003491	trip4	99	60.035	ENSOANG00000013357	TRIP4	96	60.035	Ornithorhynchus_anatinus
ENSGAFG00000003491	trip4	99	58.966	ENSOCUG00000002322	TRIP4	97	58.966	Oryctolagus_cuniculus
ENSGAFG00000003491	trip4	99	77.448	ENSORLG00000001710	trip4	99	77.448	Oryzias_latipes
ENSGAFG00000003491	trip4	99	77.622	ENSORLG00020022346	trip4	99	77.622	Oryzias_latipes_hni
ENSGAFG00000003491	trip4	99	77.273	ENSORLG00015022509	trip4	99	77.273	Oryzias_latipes_hsok
ENSGAFG00000003491	trip4	99	79.545	ENSOMEG00000007655	trip4	99	79.545	Oryzias_melastigma
ENSGAFG00000003491	trip4	99	51.552	ENSOGAG00000012427	TRIP4	97	52.496	Otolemur_garnettii
ENSGAFG00000003491	trip4	98	58.988	ENSOARG00000020739	TRIP4	97	58.988	Ovis_aries
ENSGAFG00000003491	trip4	99	58.966	ENSPPAG00000017953	TRIP4	97	58.966	Pan_paniscus
ENSGAFG00000003491	trip4	99	59.028	ENSPPRG00000013668	TRIP4	97	59.028	Panthera_pardus
ENSGAFG00000003491	trip4	99	58.591	ENSPTIG00000014502	TRIP4	97	58.591	Panthera_tigris_altaica
ENSGAFG00000003491	trip4	99	55.575	ENSPTRG00000007160	TRIP4	97	55.575	Pan_troglodytes
ENSGAFG00000003491	trip4	99	59.375	ENSPANG00000016750	TRIP4	97	59.375	Papio_anubis
ENSGAFG00000003491	trip4	99	67.814	ENSPKIG00000022978	-	100	67.814	Paramormyrops_kingsleyae
ENSGAFG00000003491	trip4	96	66.226	ENSPKIG00000009253	trip4	99	66.226	Paramormyrops_kingsleyae
ENSGAFG00000003491	trip4	95	61.717	ENSPSIG00000012082	TRIP4	98	61.717	Pelodiscus_sinensis
ENSGAFG00000003491	trip4	96	78.237	ENSPMGG00000019015	trip4	98	76.034	Periophthalmus_magnuspinnatus
ENSGAFG00000003491	trip4	99	58.262	ENSPEMG00000012446	Trip4	97	58.262	Peromyscus_maniculatus_bairdii
ENSGAFG00000003491	trip4	99	60.481	ENSPCIG00000029450	TRIP4	93	60.481	Phascolarctos_cinereus
ENSGAFG00000003491	trip4	100	96.161	ENSPFOG00000014732	trip4	100	96.161	Poecilia_formosa
ENSGAFG00000003491	trip4	100	95.986	ENSPLAG00000013794	trip4	100	95.986	Poecilia_latipinna
ENSGAFG00000003491	trip4	100	96.335	ENSPMEG00000001331	trip4	100	96.335	Poecilia_mexicana
ENSGAFG00000003491	trip4	100	95.637	ENSPREG00000006576	trip4	100	95.637	Poecilia_reticulata
ENSGAFG00000003491	trip4	99	59.138	ENSPPYG00000006550	TRIP4	97	59.138	Pongo_abelii
ENSGAFG00000003491	trip4	98	52.595	ENSPCAG00000016310	TRIP4	97	52.595	Procavia_capensis
ENSGAFG00000003491	trip4	99	46.329	ENSPCOG00000013484	TRIP4	97	46.678	Propithecus_coquereli
ENSGAFG00000003491	trip4	96	53.214	ENSPVAG00000016613	TRIP4	98	53.214	Pteropus_vampyrus
ENSGAFG00000003491	trip4	97	70.217	ENSPNYG00000011318	trip4	95	74.729	Pundamilia_nyererei
ENSGAFG00000003491	trip4	99	71.057	ENSPNAG00000020884	trip4	99	71.057	Pygocentrus_nattereri
ENSGAFG00000003491	trip4	99	57.931	ENSRNOG00000016121	Trip4	97	57.931	Rattus_norvegicus
ENSGAFG00000003491	trip4	86	59.946	ENSRBIG00000038027	TRIP4	97	59.946	Rhinopithecus_bieti
ENSGAFG00000003491	trip4	99	58.966	ENSRROG00000030525	TRIP4	97	58.966	Rhinopithecus_roxellana
ENSGAFG00000003491	trip4	99	53.086	ENSSBOG00000020516	TRIP4	97	53.792	Saimiri_boliviensis_boliviensis
ENSGAFG00000003491	trip4	95	60.963	ENSSHAG00000000040	TRIP4	99	60.963	Sarcophilus_harrisii
ENSGAFG00000003491	trip4	100	67.698	ENSSFOG00015000143	trip4	100	67.698	Scleropages_formosus
ENSGAFG00000003491	trip4	99	77.797	ENSSMAG00000010539	trip4	100	77.797	Scophthalmus_maximus
ENSGAFG00000003491	trip4	99	81.469	ENSSDUG00000000225	trip4	99	81.469	Seriola_dumerili
ENSGAFG00000003491	trip4	99	81.119	ENSSLDG00000000215	trip4	99	81.119	Seriola_lalandi_dorsalis
ENSGAFG00000003491	trip4	82	58.876	ENSSARG00000003710	TRIP4	79	58.876	Sorex_araneus
ENSGAFG00000003491	trip4	98	55.456	ENSSPUG00000004511	TRIP4	98	56.708	Sphenodon_punctatus
ENSGAFG00000003491	trip4	99	82.404	ENSSPAG00000008520	trip4	99	82.404	Stegastes_partitus
ENSGAFG00000003491	trip4	99	59.792	ENSSSCG00000004552	TRIP4	97	59.677	Sus_scrofa
ENSGAFG00000003491	trip4	99	59.170	ENSTGUG00000004673	TRIP4	100	60.381	Taeniopygia_guttata
ENSGAFG00000003491	trip4	99	77.352	ENSTRUG00000016488	trip4	99	77.352	Takifugu_rubripes
ENSGAFG00000003491	trip4	99	72.461	ENSTNIG00000009582	trip4	98	72.461	Tetraodon_nigroviridis
ENSGAFG00000003491	trip4	94	59.820	ENSTBEG00000015881	TRIP4	99	59.820	Tupaia_belangeri
ENSGAFG00000003491	trip4	87	62.295	ENSTTRG00000009674	TRIP4	86	62.295	Tursiops_truncatus
ENSGAFG00000003491	trip4	99	58.854	ENSUMAG00000012640	TRIP4	97	58.854	Ursus_maritimus
ENSGAFG00000003491	trip4	99	55.035	ENSVPAG00000010808	TRIP4	97	55.035	Vicugna_pacos
ENSGAFG00000003491	trip4	99	59.099	ENSVVUG00000013776	TRIP4	97	59.099	Vulpes_vulpes
ENSGAFG00000003491	trip4	99	57.797	ENSXETG00000010649	trip4	98	57.797	Xenopus_tropicalis
ENSGAFG00000003491	trip4	100	97.208	ENSXMAG00000000526	trip4	100	97.208	Xiphophorus_maculatus