EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000003621 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 74317 bases
Position: chrNHOQ01001904.1:1785396-1859712
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005304	zf-met	PF12874.7	1.9e-28	1	4
ENSGAFP00000005304	zf-met	PF12874.7	1.9e-28	2	4
ENSGAFP00000005304	zf-met	PF12874.7	1.9e-28	3	4
ENSGAFP00000005304	zf-met	PF12874.7	1.9e-28	4	4
ENSGAFP00000005315	zf-met	PF12874.7	2.2e-28	1	4
ENSGAFP00000005315	zf-met	PF12874.7	2.2e-28	2	4
ENSGAFP00000005315	zf-met	PF12874.7	2.2e-28	3	4
ENSGAFP00000005315	zf-met	PF12874.7	2.2e-28	4	4
ENSGAFP00000005320	zf-met	PF12874.7	1.3e-20	1	3
ENSGAFP00000005320	zf-met	PF12874.7	1.3e-20	2	3
ENSGAFP00000005320	zf-met	PF12874.7	1.3e-20	3	3
ENSGAFP00000005304	zf-C2H2_jaz	PF12171.8	5.9e-15	1	1
ENSGAFP00000005315	zf-C2H2_jaz	PF12171.8	6.8e-15	1	1
ENSGAFP00000005320	zf-C2H2_jaz	PF12171.8	4.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005375	-	3091	-	ENSGAFP00000005315	553 (aa)	-	-
ENSGAFT00000005364	-	3543	-	ENSGAFP00000005304	537 (aa)	-	-
ENSGAFT00000005380	-	2538	-	ENSGAFP00000005320	425 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000003621	-	95	47.477	ENSGAFG00000001005	znf385c	98	50.858
ENSGAFG00000003621	-	93	38.795	ENSGAFG00000010277	znf385a	89	66.667
ENSGAFG00000003621	-	95	36.429	ENSGAFG00000021760	-	98	36.092
ENSGAFG00000003621	-	93	31.000	ENSGAFG00000011657	ZNF385D	61	41.892
ENSGAFG00000003621	-	95	38.528	ENSGAFG00000021154	znf385b	83	45.652
ENSGAFG00000003621	-	95	36.916	ENSGAFG00000007871	znf385d	76	60.317

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003621	-	100	75.231	ENSAPOG00000020331	-	99	74.889	Acanthochromis_polyacanthus
ENSGAFG00000003621	-	93	48.101	ENSAPOG00000015797	znf385c	99	49.064	Acanthochromis_polyacanthus
ENSGAFG00000003621	-	92	43.212	ENSAMEG00000005930	ZNF385C	94	43.985	Ailuropoda_melanoleuca
ENSGAFG00000003621	-	95	65.517	ENSACIG00000009214	-	94	84.722	Amphilophus_citrinellus
ENSGAFG00000003621	-	93	52.600	ENSACIG00000010548	znf385c	91	76.800	Amphilophus_citrinellus
ENSGAFG00000003621	-	100	75.138	ENSAOCG00000023140	-	100	75.138	Amphiprion_ocellaris
ENSGAFG00000003621	-	93	50.990	ENSAOCG00000012241	znf385c	100	50.372	Amphiprion_ocellaris
ENSGAFG00000003621	-	93	52.849	ENSAPEG00000004794	znf385c	99	49.792	Amphiprion_percula
ENSGAFG00000003621	-	94	69.781	ENSAPEG00000015578	-	97	71.200	Amphiprion_percula
ENSGAFG00000003621	-	93	51.402	ENSATEG00000001826	znf385c	90	49.438	Anabas_testudineus
ENSGAFG00000003621	-	95	60.644	ENSATEG00000022343	-	97	62.812	Anabas_testudineus
ENSGAFG00000003621	-	95	43.171	ENSAPLG00000002883	ZNF385C	79	68.644	Anas_platyrhynchos
ENSGAFG00000003621	-	95	43.885	ENSACAG00000016919	ZNF385C	94	45.049	Anolis_carolinensis
ENSGAFG00000003621	-	100	72.661	ENSACLG00000008631	-	99	72.907	Astatotilapia_calliptera
ENSGAFG00000003621	-	92	51.145	ENSACLG00000002560	znf385c	99	47.581	Astatotilapia_calliptera
ENSGAFG00000003621	-	94	48.404	ENSAMXG00000021355	-	99	49.177	Astyanax_mexicanus
ENSGAFG00000003621	-	97	43.629	ENSAMXG00000000412	znf385c	98	44.856	Astyanax_mexicanus
ENSGAFG00000003621	-	92	43.327	ENSCAFG00000015731	ZNF385C	94	45.000	Canis_familiaris
ENSGAFG00000003621	-	93	40.811	ENSCAFG00020013967	ZNF385C	98	44.298	Canis_lupus_dingo
ENSGAFG00000003621	-	98	39.860	ENSCHIG00000013858	ZNF385C	98	43.848	Capra_hircus
ENSGAFG00000003621	-	98	40.233	ENSTSYG00000010579	ZNF385C	94	44.942	Carlito_syrichta
ENSGAFG00000003621	-	98	40.230	ENSCCAG00000030786	ZNF385C	99	42.708	Cebus_capucinus
ENSGAFG00000003621	-	98	39.583	ENSCLAG00000015100	ZNF385C	98	42.457	Chinchilla_lanigera
ENSGAFG00000003621	-	93	48.723	ENSCPBG00000006782	ZNF385C	98	48.444	Chrysemys_picta_bellii
ENSGAFG00000003621	-	98	41.509	ENSCANG00000018141	ZNF385C	94	42.963	Colobus_angolensis_palliatus
ENSGAFG00000003621	-	92	63.043	ENSCSEG00000007490	-	99	61.924	Cynoglossus_semilaevis
ENSGAFG00000003621	-	93	47.662	ENSCSEG00000021383	znf385c	98	48.033	Cynoglossus_semilaevis
ENSGAFG00000003621	-	100	83.859	ENSCVAG00000003335	-	99	82.851	Cyprinodon_variegatus
ENSGAFG00000003621	-	96	48.199	ENSCVAG00000009496	znf385c	99	47.648	Cyprinodon_variegatus
ENSGAFG00000003621	-	95	42.795	ENSDARG00000058154	znf385c	100	45.794	Danio_rerio
ENSGAFG00000003621	-	98	40.363	ENSEASG00005009102	ZNF385C	98	43.167	Equus_asinus_asinus
ENSGAFG00000003621	-	98	40.363	ENSECAG00000016402	ZNF385C	98	43.167	Equus_caballus
ENSGAFG00000003621	-	95	49.034	ENSELUG00000018401	znf385c	97	49.783	Esox_lucius
ENSGAFG00000003621	-	98	44.917	ENSFALG00000000647	ZNF385C	94	47.233	Ficedula_albicollis
ENSGAFG00000003621	-	79	47.699	ENSFHEG00000012220	znf385c	89	47.059	Fundulus_heteroclitus
ENSGAFG00000003621	-	67	74.809	ENSFHEG00000010106	-	97	74.817	Fundulus_heteroclitus
ENSGAFG00000003621	-	50	67.757	ENSGMOG00000000733	-	96	69.118	Gadus_morhua
ENSGAFG00000003621	-	84	43.681	ENSGMOG00000011879	znf385c	77	55.882	Gadus_morhua
ENSGAFG00000003621	-	94	45.098	ENSGALG00000003403	ZNF385C	93	44.743	Gallus_gallus
ENSGAFG00000003621	-	93	48.649	ENSGAGG00000023263	ZNF385C	98	47.682	Gopherus_agassizii
ENSGAFG00000003621	-	98	41.763	ENSGGOG00000013170	ZNF385C	60	71.028	Gorilla_gorilla
ENSGAFG00000003621	-	100	72.477	ENSHBUG00000003996	-	100	72.294	Haplochromis_burtoni
ENSGAFG00000003621	-	92	51.336	ENSHBUG00000001935	znf385c	99	47.581	Haplochromis_burtoni
ENSGAFG00000003621	-	94	61.644	ENSHCOG00000020248	-	96	59.184	Hippocampus_comes
ENSGAFG00000003621	-	95	47.619	ENSHCOG00000004896	znf385c	81	76.577	Hippocampus_comes
ENSGAFG00000003621	-	97	43.975	ENSIPUG00000017483	znf385c	92	46.753	Ictalurus_punctatus
ENSGAFG00000003621	-	95	40.534	ENSJJAG00000020892	Zfp385c	97	42.198	Jaculus_jaculus
ENSGAFG00000003621	-	95	46.292	ENSKMAG00000020120	znf385c	99	49.068	Kryptolebias_marmoratus
ENSGAFG00000003621	-	100	70.939	ENSKMAG00000017463	-	99	73.098	Kryptolebias_marmoratus
ENSGAFG00000003621	-	100	65.548	ENSLBEG00000021407	-	100	65.194	Labrus_bergylta
ENSGAFG00000003621	-	93	46.988	ENSLBEG00000004271	znf385c	99	47.945	Labrus_bergylta
ENSGAFG00000003621	-	60	68.627	ENSLACG00000005345	ZNF385C	68	44.944	Latimeria_chalumnae
ENSGAFG00000003621	-	93	47.222	ENSLOCG00000012589	znf385c	95	45.604	Lepisosteus_oculatus
ENSGAFG00000003621	-	93	51.985	ENSMAMG00000022312	znf385c	95	51.992	Mastacembelus_armatus
ENSGAFG00000003621	-	100	70.459	ENSMAMG00000016188	-	100	67.321	Mastacembelus_armatus
ENSGAFG00000003621	-	100	72.661	ENSMZEG00005021094	-	99	72.907	Maylandia_zebra
ENSGAFG00000003621	-	92	50.954	ENSMZEG00005022745	znf385c	99	46.562	Maylandia_zebra
ENSGAFG00000003621	-	76	46.429	ENSMGAG00000003221	-	56	65.116	Meleagris_gallopavo
ENSGAFG00000003621	-	95	41.981	ENSMOCG00000006378	Zfp385c	98	42.918	Microtus_ochrogaster
ENSGAFG00000003621	-	98	48.921	ENSMMOG00000020703	znf385c	98	51.919	Mola_mola
ENSGAFG00000003621	-	95	59.506	ENSMMOG00000013984	-	97	61.745	Mola_mola
ENSGAFG00000003621	-	97	39.278	ENSMODG00000014774	ZNF385C	98	44.872	Monodelphis_domestica
ENSGAFG00000003621	-	95	63.861	ENSMALG00000022342	-	99	65.778	Monopterus_albus
ENSGAFG00000003621	-	95	48.837	ENSMALG00000006626	znf385c	99	46.825	Monopterus_albus
ENSGAFG00000003621	-	95	41.844	MGP_CAROLIEiJ_G0017180	Zfp385c	66	61.538	Mus_caroli
ENSGAFG00000003621	-	95	41.452	ENSMUSG00000014198	Zfp385c	97	41.561	Mus_musculus
ENSGAFG00000003621	-	95	40.898	MGP_PahariEiJ_G0018310	Zfp385c	97	43.750	Mus_pahari
ENSGAFG00000003621	-	93	43.077	MGP_SPRETEiJ_G0018023	Zfp385c	94	42.505	Mus_spretus
ENSGAFG00000003621	-	98	36.806	ENSMPUG00000010573	ZNF385C	94	43.762	Mustela_putorius_furo
ENSGAFG00000003621	-	98	39.955	ENSMLUG00000011983	ZNF385C	94	45.057	Myotis_lucifugus
ENSGAFG00000003621	-	97	41.686	ENSNGAG00000009495	Zfp385c	99	43.043	Nannospalax_galili
ENSGAFG00000003621	-	93	64.051	ENSNBRG00000016947	-	100	62.532	Neolamprologus_brichardi
ENSGAFG00000003621	-	93	47.160	ENSNBRG00000018835	znf385c	100	46.683	Neolamprologus_brichardi
ENSGAFG00000003621	-	93	40.741	ENSMEUG00000016616	ZNF385C	100	41.706	Notamacropus_eugenii
ENSGAFG00000003621	-	93	39.089	ENSOPRG00000008120	ZNF385C	88	39.183	Ochotona_princeps
ENSGAFG00000003621	-	95	40.235	ENSODEG00000018049	ZNF385C	97	41.505	Octodon_degus
ENSGAFG00000003621	-	98	72.761	ENSONIG00000016281	-	100	72.015	Oreochromis_niloticus
ENSGAFG00000003621	-	95	48.905	ENSONIG00000001083	znf385c	98	50.221	Oreochromis_niloticus
ENSGAFG00000003621	-	71	41.639	ENSOANG00000004705	-	88	39.145	Ornithorhynchus_anatinus
ENSGAFG00000003621	-	97	39.394	ENSOCUG00000013271	ZNF385C	94	45.229	Oryctolagus_cuniculus
ENSGAFG00000003621	-	95	50.350	ENSORLG00000003810	znf385c	98	50.844	Oryzias_latipes
ENSGAFG00000003621	-	100	65.938	ENSORLG00000029969	-	99	64.613	Oryzias_latipes
ENSGAFG00000003621	-	100	65.756	ENSORLG00020020411	-	99	64.695	Oryzias_latipes_hni
ENSGAFG00000003621	-	95	48.423	ENSORLG00020008564	znf385c	99	48.347	Oryzias_latipes_hni
ENSGAFG00000003621	-	93	49.820	ENSORLG00015022036	znf385c	91	48.142	Oryzias_latipes_hsok
ENSGAFG00000003621	-	100	65.392	ENSORLG00015000506	-	99	64.365	Oryzias_latipes_hsok
ENSGAFG00000003621	-	100	65.314	ENSOMEG00000004855	ZNF385C	100	63.100	Oryzias_melastigma
ENSGAFG00000003621	-	95	45.122	ENSOMEG00000022981	znf385c	100	46.785	Oryzias_melastigma
ENSGAFG00000003621	-	98	41.855	ENSOGAG00000017196	ZNF385C	94	44.615	Otolemur_garnettii
ENSGAFG00000003621	-	95	48.667	ENSPKIG00000001346	ZNF385C	98	50.312	Paramormyrops_kingsleyae
ENSGAFG00000003621	-	95	44.395	ENSPKIG00000020227	znf385c	98	46.694	Paramormyrops_kingsleyae
ENSGAFG00000003621	-	94	44.250	ENSPSIG00000007592	ZNF385C	96	44.978	Pelodiscus_sinensis
ENSGAFG00000003621	-	95	71.901	ENSPMGG00000019158	ZNF385C	95	79.412	Periophthalmus_magnuspinnatus
ENSGAFG00000003621	-	95	39.437	ENSPEMG00000018609	Zfp385c	98	42.796	Peromyscus_maniculatus_bairdii
ENSGAFG00000003621	-	93	38.929	ENSPMAG00000000983	znf385c	100	37.379	Petromyzon_marinus
ENSGAFG00000003621	-	97	39.810	ENSPCIG00000020238	ZNF385C	98	44.273	Phascolarctos_cinereus
ENSGAFG00000003621	-	100	90.149	ENSPFOG00000005958	-	99	91.723	Poecilia_formosa
ENSGAFG00000003621	-	95	48.792	ENSPFOG00000011713	znf385c	98	49.563	Poecilia_formosa
ENSGAFG00000003621	-	96	47.059	ENSPLAG00000021677	znf385c	99	47.316	Poecilia_latipinna
ENSGAFG00000003621	-	100	90.433	ENSPLAG00000016301	-	100	90.794	Poecilia_latipinna
ENSGAFG00000003621	-	96	47.323	ENSPMEG00000011416	znf385c	99	47.117	Poecilia_mexicana
ENSGAFG00000003621	-	100	89.963	ENSPMEG00000012593	-	100	90.335	Poecilia_mexicana
ENSGAFG00000003621	-	98	80.151	ENSPREG00000022214	-	100	79.962	Poecilia_reticulata
ENSGAFG00000003621	-	92	47.469	ENSPREG00000010489	znf385c	90	47.150	Poecilia_reticulata
ENSGAFG00000003621	-	62	83.333	ENSPCAG00000015851	ZNF385C	65	83.333	Procavia_capensis
ENSGAFG00000003621	-	98	41.876	ENSPCOG00000023229	ZNF385C	94	44.722	Propithecus_coquereli
ENSGAFG00000003621	-	98	41.163	ENSPVAG00000003852	ZNF385C	97	43.929	Pteropus_vampyrus
ENSGAFG00000003621	-	95	46.101	ENSPNYG00000011104	znf385c	99	47.292	Pundamilia_nyererei
ENSGAFG00000003621	-	98	63.636	ENSPNYG00000015868	-	92	81.951	Pundamilia_nyererei
ENSGAFG00000003621	-	97	48.585	ENSPNAG00000028718	znf385c	99	50.000	Pygocentrus_nattereri
ENSGAFG00000003621	-	92	53.398	ENSPNAG00000012405	-	99	46.906	Pygocentrus_nattereri
ENSGAFG00000003621	-	93	42.271	ENSRNOG00000025370	Zfp385c	100	41.330	Rattus_norvegicus
ENSGAFG00000003621	-	97	41.667	ENSSHAG00000006918	ZNF385C	93	45.298	Sarcophilus_harrisii
ENSGAFG00000003621	-	75	50.156	ENSSFOG00015010100	ZNF385C	86	46.605	Scleropages_formosus
ENSGAFG00000003621	-	60	47.546	ENSSFOG00015023128	znf385c	74	46.646	Scleropages_formosus
ENSGAFG00000003621	-	100	69.908	ENSSMAG00000020018	-	99	69.757	Scophthalmus_maximus
ENSGAFG00000003621	-	93	49.259	ENSSMAG00000007453	znf385c	98	49.476	Scophthalmus_maximus
ENSGAFG00000003621	-	100	73.042	ENSSDUG00000021332	-	100	70.567	Seriola_dumerili
ENSGAFG00000003621	-	93	48.936	ENSSDUG00000022960	znf385c	99	48.303	Seriola_dumerili
ENSGAFG00000003621	-	93	51.397	ENSSLDG00000017600	znf385c	99	48.381	Seriola_lalandi_dorsalis
ENSGAFG00000003621	-	100	73.770	ENSSLDG00000019275	-	99	73.510	Seriola_lalandi_dorsalis
ENSGAFG00000003621	-	95	44.634	ENSSPUG00000013129	ZNF385C	98	46.637	Sphenodon_punctatus
ENSGAFG00000003621	-	95	72.488	ENSSPAG00000014005	-	99	74.837	Stegastes_partitus
ENSGAFG00000003621	-	95	46.396	ENSSPAG00000006535	znf385c	99	49.269	Stegastes_partitus
ENSGAFG00000003621	-	95	45.012	ENSTGUG00000002501	ZNF385C	99	45.753	Taeniopygia_guttata
ENSGAFG00000003621	-	95	48.039	ENSTRUG00000015771	znf385c	96	69.903	Takifugu_rubripes
ENSGAFG00000003621	-	100	61.596	ENSTRUG00000011082	-	100	59.740	Takifugu_rubripes
ENSGAFG00000003621	-	83	68.919	ENSTNIG00000005317	-	91	67.910	Tetraodon_nigroviridis
ENSGAFG00000003621	-	95	48.642	ENSTNIG00000011714	znf385c	99	49.324	Tetraodon_nigroviridis
ENSGAFG00000003621	-	98	41.149	ENSTTRG00000006632	ZNF385C	97	44.372	Tursiops_truncatus
ENSGAFG00000003621	-	93	42.611	ENSUAMG00000024598	ZNF385C	97	43.818	Ursus_americanus
ENSGAFG00000003621	-	93	41.990	ENSUMAG00000022993	ZNF385C	98	43.384	Ursus_maritimus
ENSGAFG00000003621	-	93	40.389	ENSVVUG00000020910	ZNF385C	94	43.601	Vulpes_vulpes
ENSGAFG00000003621	-	95	84.118	ENSXCOG00000006303	-	98	83.068	Xiphophorus_couchianus
ENSGAFG00000003621	-	100	96.089	ENSXMAG00000010258	-	100	96.089	Xiphophorus_maculatus
ENSGAFG00000003621	-	99	45.124	ENSXMAG00000008886	znf385c	81	48.135	Xiphophorus_maculatus