EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000003687 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5711 bases
Position: chrNHOQ01001678.1:2427480-2433190
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005410	RRM_1	PF00076.22	1.1e-08	1	1
ENSGAFP00000005410	Surp	PF01805.20	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005470	-	930	-	ENSGAFP00000005410	309 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003687's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003687	-	90	48.588	ENSG00000163714	U2SURP	65	47.653	Homo_sapiens
ENSGAFG00000003687	-	100	54.062	ENSAMXG00000005081	zgc:163098	88	59.006	Astyanax_mexicanus
ENSGAFG00000003687	-	71	48.043	ENSBTAG00000009154	U2SURP	65	47.653	Bos_taurus
ENSGAFG00000003687	-	90	48.588	ENSCAFG00020010497	U2SURP	70	47.653	Canis_lupus_dingo
ENSGAFG00000003687	-	90	48.588	ENSTSYG00000008889	U2SURP	70	44.147	Carlito_syrichta
ENSGAFG00000003687	-	90	48.588	ENSCCAG00000032530	U2SURP	68	47.653	Cebus_capucinus
ENSGAFG00000003687	-	98	47.721	ENSDARG00000061490	u2surp	79	49.091	Danio_rerio
ENSGAFG00000003687	-	100	61.127	ENSDARG00000078911	zgc:163098	95	61.690	Danio_rerio
ENSGAFG00000003687	-	76	45.161	ENSDORG00000005201	-	65	46.099	Dipodomys_ordii
ENSGAFG00000003687	-	90	47.740	ENSGALG00000002612	U2SURP	61	46.931	Gallus_gallus
ENSGAFG00000003687	-	90	48.588	ENSGGOG00000005563	U2SURP	65	47.653	Gorilla_gorilla
ENSGAFG00000003687	-	100	70.997	ENSHCOG00000001838	zgc:163098	84	69.789	Hippocampus_comes
ENSGAFG00000003687	-	90	48.588	ENSMMUG00000002775	U2SURP	65	47.653	Macaca_mulatta
ENSGAFG00000003687	-	71	47.687	ENSMAUG00000009255	-	65	46.099	Mesocricetus_auratus
ENSGAFG00000003687	-	90	48.588	MGP_CAROLIEiJ_G0032530	-	65	46.099	Mus_caroli
ENSGAFG00000003687	-	90	48.588	ENSMUSG00000032407	U2surp	65	46.099	Mus_musculus
ENSGAFG00000003687	-	90	48.588	MGP_PahariEiJ_G0015398	U2surp	65	46.099	Mus_pahari
ENSGAFG00000003687	-	90	48.588	MGP_SPRETEiJ_G0033672	U2surp	65	46.099	Mus_spretus
ENSGAFG00000003687	-	98	46.978	ENSNBRG00000017162	u2surp	77	45.714	Neolamprologus_brichardi
ENSGAFG00000003687	-	98	49.176	ENSOMEG00000004962	u2surp	90	47.678	Oryzias_melastigma
ENSGAFG00000003687	-	71	48.043	ENSPPAG00000027945	-	68	47.653	Pan_paniscus
ENSGAFG00000003687	-	90	48.588	ENSPTRG00000015489	U2SURP	65	47.653	Pan_troglodytes
ENSGAFG00000003687	-	99	49.857	ENSPMGG00000001808	u2surp	86	50.968	Periophthalmus_magnuspinnatus
ENSGAFG00000003687	-	91	62.058	ENSPMGG00000008623	zgc:163098	66	78.481	Periophthalmus_magnuspinnatus
ENSGAFG00000003687	-	100	60.452	ENSSFOG00015004962	zgc:163098	80	61.311	Scleropages_formosus
ENSGAFG00000003687	-	100	70.670	ENSSLDG00000020364	zgc:163098	97	70.588	Seriola_lalandi_dorsalis
ENSGAFG00000003687	-	90	48.588	ENSUAMG00000028259	U2SURP	70	47.653	Ursus_americanus