EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000003714 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7113 bases
Position: chrNHOQ01001156.1:16644696-16651808
Accession: ZDB-GENE-070424-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005441	CBFNT	PF08143.11	0.00024	1	1
ENSGAFP00000005432	CBFNT	PF08143.11	0.00031	1	1
ENSGAFP00000005441	RRM_1	PF00076.22	2e-33	1	2
ENSGAFP00000005441	RRM_1	PF00076.22	2e-33	2	2
ENSGAFP00000005432	RRM_1	PF00076.22	3.4e-33	1	2
ENSGAFP00000005432	RRM_1	PF00076.22	3.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005502	-	798	-	ENSGAFP00000005441	265 (aa)	-	-
ENSGAFT00000005493	-	3409	-	ENSGAFP00000005432	320 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003714's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000003714	hnrnpd	82	38.627	ENSGAFG00000007751	-	53	40.000
ENSGAFG00000003714	hnrnpd	62	48.193	ENSGAFG00000021522	MSI1	53	48.193
ENSGAFG00000003714	hnrnpd	78	33.158	ENSGAFG00000011052	tardbp	51	38.194
ENSGAFG00000003714	hnrnpd	68	46.667	ENSGAFG00000006974	msi2a	90	46.667
ENSGAFG00000003714	hnrnpd	71	66.839	ENSGAFG00000011265	-	92	61.986
ENSGAFG00000003714	hnrnpd	74	38.308	ENSGAFG00000004116	HNRNPA3	62	39.423
ENSGAFG00000003714	hnrnpd	70	40.476	ENSGAFG00000019917	rbmx	92	43.478
ENSGAFG00000003714	hnrnpd	62	36.842	ENSGAFG00000016803	-	60	37.321
ENSGAFG00000003714	hnrnpd	54	38.462	ENSGAFG00000010998	slirp	79	38.462
ENSGAFG00000003714	hnrnpd	63	35.260	ENSGAFG00000016679	-	56	35.294
ENSGAFG00000003714	hnrnpd	91	59.396	ENSGAFG00000008331	hnrnpaba	95	61.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003714	hnrnpd	87	85.646	ENSG00000138668	HNRNPD	100	89.189	Homo_sapiens
ENSGAFG00000003714	hnrnpd	94	100.000	ENSAPOG00000006184	hnrnpd	100	93.585	Acanthochromis_polyacanthus
ENSGAFG00000003714	hnrnpd	88	75.083	ENSAMEG00000005158	HNRNPD	92	77.333	Ailuropoda_melanoleuca
ENSGAFG00000003714	hnrnpd	94	89.723	ENSACIG00000008353	hnrnpd	83	91.440	Amphilophus_citrinellus
ENSGAFG00000003714	hnrnpd	100	93.585	ENSAOCG00000014191	hnrnpd	100	93.585	Amphiprion_ocellaris
ENSGAFG00000003714	hnrnpd	94	100.000	ENSAPEG00000005603	hnrnpd	100	90.938	Amphiprion_percula
ENSGAFG00000003714	hnrnpd	94	100.000	ENSATEG00000007097	hnrnpd	100	91.250	Anabas_testudineus
ENSGAFG00000003714	hnrnpd	94	80.608	ENSACAG00000010342	HNRNPD	100	82.510	Anolis_carolinensis
ENSGAFG00000003714	hnrnpd	88	80.142	ENSANAG00000035221	HNRNPD	82	82.562	Aotus_nancymaae
ENSGAFG00000003714	hnrnpd	100	95.652	ENSACLG00000025213	hnrnpd	100	90.625	Astatotilapia_calliptera
ENSGAFG00000003714	hnrnpd	92	91.255	ENSACLG00000026497	hnrnpd	100	92.015	Astatotilapia_calliptera
ENSGAFG00000003714	hnrnpd	100	82.188	ENSAMXG00000001477	hnrnpd	100	81.875	Astyanax_mexicanus
ENSGAFG00000003714	hnrnpd	86	78.455	ENSBTAG00000013952	HNRNPD	86	75.241	Bos_taurus
ENSGAFG00000003714	hnrnpd	88	80.142	ENSCJAG00000015165	HNRNPD	90	76.774	Callithrix_jacchus
ENSGAFG00000003714	hnrnpd	88	74.419	ENSCAFG00000025045	HNRNPD	83	76.333	Canis_familiaris
ENSGAFG00000003714	hnrnpd	88	74.419	ENSCAFG00020010713	HNRNPD	83	76.333	Canis_lupus_dingo
ENSGAFG00000003714	hnrnpd	88	79.433	ENSCHIG00000022317	HNRNPD	82	82.562	Capra_hircus
ENSGAFG00000003714	hnrnpd	89	80.288	ENSTSYG00000010395	HNRNPD	100	80.769	Carlito_syrichta
ENSGAFG00000003714	hnrnpd	90	67.003	ENSCPOG00000040484	HNRNPD	87	67.003	Cavia_porcellus
ENSGAFG00000003714	hnrnpd	64	55.392	ENSCCAG00000021563	-	71	62.143	Cebus_capucinus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSCCAG00000024528	HNRNPD	85	80.479	Cebus_capucinus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSCATG00000039829	HNRNPD	85	80.479	Cercocebus_atys
ENSGAFG00000003714	hnrnpd	89	80.427	ENSCLAG00000006540	HNRNPD	92	82.562	Chinchilla_lanigera
ENSGAFG00000003714	hnrnpd	88	74.419	ENSCSAG00000004463	HNRNPD	86	75.563	Chlorocebus_sabaeus
ENSGAFG00000003714	hnrnpd	94	77.007	ENSCHOG00000000045	HNRNPD	98	79.927	Choloepus_hoffmanni
ENSGAFG00000003714	hnrnpd	86	80.072	ENSCPBG00000008025	HNRNPD	94	75.556	Chrysemys_picta_bellii
ENSGAFG00000003714	hnrnpd	88	79.787	ENSCANG00000018501	HNRNPD	85	80.822	Colobus_angolensis_palliatus
ENSGAFG00000003714	hnrnpd	88	79.787	ENSCGRG00001014634	Hnrnpd	91	77.170	Cricetulus_griseus_chok1gshd
ENSGAFG00000003714	hnrnpd	94	77.372	ENSCGRG00000007563	Hnrnpd	96	80.000	Cricetulus_griseus_crigri
ENSGAFG00000003714	hnrnpd	100	80.938	ENSCSEG00000010909	hnrnpd	100	83.851	Cynoglossus_semilaevis
ENSGAFG00000003714	hnrnpd	100	95.312	ENSCVAG00000019790	hnrnpd	100	95.312	Cyprinodon_variegatus
ENSGAFG00000003714	hnrnpd	100	82.609	ENSDARG00000059246	hnrnpd	100	82.555	Danio_rerio
ENSGAFG00000003714	hnrnpd	89	77.372	ENSDNOG00000013830	-	76	78.102	Dasypus_novemcinctus
ENSGAFG00000003714	hnrnpd	81	72.093	ENSDNOG00000045079	-	72	72.093	Dasypus_novemcinctus
ENSGAFG00000003714	hnrnpd	73	68.557	ENSDNOG00000041055	-	76	68.557	Dasypus_novemcinctus
ENSGAFG00000003714	hnrnpd	88	79.715	ENSDORG00000012507	Hnrnpd	95	82.562	Dipodomys_ordii
ENSGAFG00000003714	hnrnpd	86	75.932	ENSETEG00000016709	HNRNPD	83	77.667	Echinops_telfairi
ENSGAFG00000003714	hnrnpd	88	79.433	ENSEASG00005016278	HNRNPD	82	82.562	Equus_asinus_asinus
ENSGAFG00000003714	hnrnpd	88	74.419	ENSECAG00000009344	HNRNPD	83	76.333	Equus_caballus
ENSGAFG00000003714	hnrnpd	88	66.113	ENSEEUG00000007552	HNRNPD	91	62.918	Erinaceus_europaeus
ENSGAFG00000003714	hnrnpd	91	72.581	ENSELUG00000003230	hnrnpd	82	78.455	Esox_lucius
ENSGAFG00000003714	hnrnpd	88	80.142	ENSFCAG00000027404	HNRNPD	83	76.333	Felis_catus
ENSGAFG00000003714	hnrnpd	88	79.715	ENSFALG00000005716	HNRNPD	89	78.738	Ficedula_albicollis
ENSGAFG00000003714	hnrnpd	89	78.102	ENSFDAG00000007958	HNRNPD	81	77.818	Fukomys_damarensis
ENSGAFG00000003714	hnrnpd	100	92.812	ENSFHEG00000006838	hnrnpd	100	93.438	Fundulus_heteroclitus
ENSGAFG00000003714	hnrnpd	100	72.586	ENSGMOG00000018481	hnrnpd	100	77.882	Gadus_morhua
ENSGAFG00000003714	hnrnpd	94	79.848	ENSGALG00000011184	HNRNPD	100	82.890	Gallus_gallus
ENSGAFG00000003714	hnrnpd	100	86.378	ENSGACG00000015669	hnrnpd	100	86.997	Gasterosteus_aculeatus
ENSGAFG00000003714	hnrnpd	86	74.915	ENSGAGG00000003656	HNRNPD	93	72.446	Gopherus_agassizii
ENSGAFG00000003714	hnrnpd	94	80.303	ENSGGOG00000026760	HNRNPD	94	82.576	Gorilla_gorilla
ENSGAFG00000003714	hnrnpd	100	90.000	ENSHBUG00000011794	hnrnpd	100	90.312	Haplochromis_burtoni
ENSGAFG00000003714	hnrnpd	88	80.427	ENSHGLG00000004214	HNRNPD	82	82.562	Heterocephalus_glaber_female
ENSGAFG00000003714	hnrnpd	94	79.468	ENSHGLG00100005996	HNRNPD	100	82.510	Heterocephalus_glaber_male
ENSGAFG00000003714	hnrnpd	100	83.521	ENSHCOG00000000087	hnrnpd	100	83.521	Hippocampus_comes
ENSGAFG00000003714	hnrnpd	98	77.778	ENSIPUG00000024954	hnrnpd	99	79.683	Ictalurus_punctatus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSSTOG00000013970	HNRNPD	88	76.568	Ictidomys_tridecemlineatus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSJJAG00000023387	Hnrnpd	97	80.137	Jaculus_jaculus
ENSGAFG00000003714	hnrnpd	100	88.438	ENSKMAG00000004310	hnrnpd	100	89.688	Kryptolebias_marmoratus
ENSGAFG00000003714	hnrnpd	100	89.688	ENSLBEG00000027508	hnrnpd	100	90.000	Labrus_bergylta
ENSGAFG00000003714	hnrnpd	95	76.721	ENSLACG00000005306	HNRNPD	94	78.689	Latimeria_chalumnae
ENSGAFG00000003714	hnrnpd	100	78.750	ENSLOCG00000010743	hnrnpd	100	76.250	Lepisosteus_oculatus
ENSGAFG00000003714	hnrnpd	94	77.372	ENSLAFG00000016483	HNRNPD	98	80.000	Loxodonta_africana
ENSGAFG00000003714	hnrnpd	88	79.433	ENSMFAG00000031674	HNRNPD	85	80.479	Macaca_fascicularis
ENSGAFG00000003714	hnrnpd	88	79.433	ENSMNEG00000028199	HNRNPD	85	80.479	Macaca_nemestrina
ENSGAFG00000003714	hnrnpd	88	79.433	ENSMLEG00000028370	HNRNPD	85	80.479	Mandrillus_leucophaeus
ENSGAFG00000003714	hnrnpd	100	89.688	ENSMAMG00000004971	hnrnpd	100	90.625	Mastacembelus_armatus
ENSGAFG00000003714	hnrnpd	100	90.000	ENSMZEG00005007558	hnrnpd	100	90.625	Maylandia_zebra
ENSGAFG00000003714	hnrnpd	94	79.924	ENSMGAG00000008051	HNRNPD	100	82.955	Meleagris_gallopavo
ENSGAFG00000003714	hnrnpd	88	79.787	ENSMAUG00000008830	Hnrnpd	86	80.822	Mesocricetus_auratus
ENSGAFG00000003714	hnrnpd	86	80.435	ENSMICG00000010984	HNRNPD	90	80.546	Microcebus_murinus
ENSGAFG00000003714	hnrnpd	88	79.787	ENSMOCG00000021398	Hnrnpd	85	80.822	Microtus_ochrogaster
ENSGAFG00000003714	hnrnpd	100	85.312	ENSMMOG00000008627	hnrnpd	100	85.312	Mola_mola
ENSGAFG00000003714	hnrnpd	88	74.917	ENSMODG00000011898	HNRNPD	79	76.898	Monodelphis_domestica
ENSGAFG00000003714	hnrnpd	100	89.688	ENSMALG00000016024	hnrnpd	100	90.938	Monopterus_albus
ENSGAFG00000003714	hnrnpd	87	85.333	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	92.000	Mus_caroli
ENSGAFG00000003714	hnrnpd	87	85.333	ENSMUSG00000000568	Hnrnpd	100	92.000	Mus_musculus
ENSGAFG00000003714	hnrnpd	87	85.333	MGP_PahariEiJ_G0017224	Hnrnpd	100	92.000	Mus_pahari
ENSGAFG00000003714	hnrnpd	87	85.333	MGP_SPRETEiJ_G0028443	Hnrnpd	100	92.000	Mus_spretus
ENSGAFG00000003714	hnrnpd	94	77.372	ENSMPUG00000014782	HNRNPD	98	80.292	Mustela_putorius_furo
ENSGAFG00000003714	hnrnpd	88	68.439	ENSMLUG00000010628	HNRNPD	86	68.810	Myotis_lucifugus
ENSGAFG00000003714	hnrnpd	88	79.787	ENSNGAG00000013451	Hnrnpd	86	80.822	Nannospalax_galili
ENSGAFG00000003714	hnrnpd	100	89.688	ENSNBRG00000019548	hnrnpd	100	90.000	Neolamprologus_brichardi
ENSGAFG00000003714	hnrnpd	94	80.935	ENSNLEG00000008600	HNRNPD	84	83.094	Nomascus_leucogenys
ENSGAFG00000003714	hnrnpd	68	71.429	ENSMEUG00000006804	-	58	78.571	Notamacropus_eugenii
ENSGAFG00000003714	hnrnpd	88	72.667	ENSOPRG00000009336	HNRNPD	82	73.667	Ochotona_princeps
ENSGAFG00000003714	hnrnpd	88	79.715	ENSODEG00000001897	HNRNPD	87	82.562	Octodon_degus
ENSGAFG00000003714	hnrnpd	100	90.000	ENSONIG00000015390	hnrnpd	100	90.625	Oreochromis_niloticus
ENSGAFG00000003714	hnrnpd	94	79.468	ENSOANG00000001932	HNRNPD	100	82.510	Ornithorhynchus_anatinus
ENSGAFG00000003714	hnrnpd	94	77.372	ENSOCUG00000001357	HNRNPD	98	80.000	Oryctolagus_cuniculus
ENSGAFG00000003714	hnrnpd	100	93.208	ENSORLG00000001833	hnrnpd	100	93.208	Oryzias_latipes
ENSGAFG00000003714	hnrnpd	93	85.953	ENSORLG00020014780	hnrnpd	84	85.953	Oryzias_latipes_hni
ENSGAFG00000003714	hnrnpd	100	93.208	ENSORLG00015002382	hnrnpd	100	93.208	Oryzias_latipes_hsok
ENSGAFG00000003714	hnrnpd	95	95.455	ENSOMEG00000018558	hnrnpd	100	83.385	Oryzias_melastigma
ENSGAFG00000003714	hnrnpd	88	75.083	ENSOGAG00000004075	HNRNPD	88	72.812	Otolemur_garnettii
ENSGAFG00000003714	hnrnpd	94	77.372	ENSOARG00000000579	HNRNPD	98	80.292	Ovis_aries
ENSGAFG00000003714	hnrnpd	98	74.679	ENSPPAG00000035750	HNRNPD	100	80.769	Pan_paniscus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSPPRG00000012258	HNRNPD	82	82.562	Panthera_pardus
ENSGAFG00000003714	hnrnpd	88	80.142	ENSPTIG00000019434	HNRNPD	100	80.137	Panthera_tigris_altaica
ENSGAFG00000003714	hnrnpd	88	79.433	ENSPTRG00000016215	HNRNPD	85	80.479	Pan_troglodytes
ENSGAFG00000003714	hnrnpd	88	79.433	ENSPANG00000011785	HNRNPD	85	80.479	Papio_anubis
ENSGAFG00000003714	hnrnpd	100	80.524	ENSPKIG00000025512	hnrnpd	100	80.150	Paramormyrops_kingsleyae
ENSGAFG00000003714	hnrnpd	76	85.437	ENSPSIG00000017029	HNRNPD	80	85.222	Pelodiscus_sinensis
ENSGAFG00000003714	hnrnpd	86	81.140	ENSPMGG00000017169	hnrnpd	85	80.156	Periophthalmus_magnuspinnatus
ENSGAFG00000003714	hnrnpd	97	71.383	ENSPEMG00000014804	Hnrnpd	95	71.383	Peromyscus_maniculatus_bairdii
ENSGAFG00000003714	hnrnpd	89	79.505	ENSPCIG00000003112	HNRNPD	78	81.979	Phascolarctos_cinereus
ENSGAFG00000003714	hnrnpd	100	97.812	ENSPFOG00000002596	hnrnpd	100	97.812	Poecilia_formosa
ENSGAFG00000003714	hnrnpd	100	97.188	ENSPLAG00000004297	hnrnpd	100	97.188	Poecilia_latipinna
ENSGAFG00000003714	hnrnpd	100	97.812	ENSPMEG00000000152	hnrnpd	100	97.812	Poecilia_mexicana
ENSGAFG00000003714	hnrnpd	92	95.833	ENSPREG00000018081	hnrnpd	95	95.833	Poecilia_reticulata
ENSGAFG00000003714	hnrnpd	88	74.419	ENSPPYG00000014885	HNRNPD	86	75.563	Pongo_abelii
ENSGAFG00000003714	hnrnpd	86	66.242	ENSPPYG00000020411	-	99	66.242	Pongo_abelii
ENSGAFG00000003714	hnrnpd	88	73.179	ENSPCAG00000002182	HNRNPD	89	71.028	Procavia_capensis
ENSGAFG00000003714	hnrnpd	88	79.433	ENSPCOG00000021331	HNRNPD	82	82.562	Propithecus_coquereli
ENSGAFG00000003714	hnrnpd	88	74.086	ENSPVAG00000000003	HNRNPD	83	74.333	Pteropus_vampyrus
ENSGAFG00000003714	hnrnpd	100	89.688	ENSPNYG00000004884	hnrnpd	100	90.000	Pundamilia_nyererei
ENSGAFG00000003714	hnrnpd	100	78.438	ENSPNAG00000016368	hnrnpd	100	77.231	Pygocentrus_nattereri
ENSGAFG00000003714	hnrnpd	88	79.004	ENSRNOG00000002292	Hnrnpd	82	81.851	Rattus_norvegicus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSRBIG00000035345	HNRNPD	85	80.479	Rhinopithecus_bieti
ENSGAFG00000003714	hnrnpd	88	79.433	ENSRROG00000011888	HNRNPD	85	80.479	Rhinopithecus_roxellana
ENSGAFG00000003714	hnrnpd	88	79.433	ENSSBOG00000032881	HNRNPD	85	80.479	Saimiri_boliviensis_boliviensis
ENSGAFG00000003714	hnrnpd	94	77.372	ENSSHAG00000013312	HNRNPD	98	80.292	Sarcophilus_harrisii
ENSGAFG00000003714	hnrnpd	100	76.562	ENSSFOG00015005913	hnrnpd	100	79.688	Scleropages_formosus
ENSGAFG00000003714	hnrnpd	100	86.916	ENSSMAG00000009686	hnrnpd	100	87.227	Scophthalmus_maximus
ENSGAFG00000003714	hnrnpd	100	89.688	ENSSDUG00000010792	hnrnpd	100	90.000	Seriola_dumerili
ENSGAFG00000003714	hnrnpd	100	84.735	ENSSLDG00000015962	hnrnpd	100	88.162	Seriola_lalandi_dorsalis
ENSGAFG00000003714	hnrnpd	94	78.467	ENSSARG00000006883	HNRNPD	98	77.737	Sorex_araneus
ENSGAFG00000003714	hnrnpd	89	77.273	ENSSPUG00000013677	HNRNPD	100	78.030	Sphenodon_punctatus
ENSGAFG00000003714	hnrnpd	94	100.000	ENSSPAG00000021014	hnrnpd	100	93.208	Stegastes_partitus
ENSGAFG00000003714	hnrnpd	88	79.433	ENSSSCG00000009249	HNRNPD	82	82.206	Sus_scrofa
ENSGAFG00000003714	hnrnpd	86	75.932	ENSTGUG00000002858	HNRNPD	93	73.955	Taeniopygia_guttata
ENSGAFG00000003714	hnrnpd	100	86.250	ENSTRUG00000018450	hnrnpd	100	86.562	Takifugu_rubripes
ENSGAFG00000003714	hnrnpd	90	84.647	ENSTNIG00000013499	hnrnpd	100	84.647	Tetraodon_nigroviridis
ENSGAFG00000003714	hnrnpd	89	72.628	ENSTBEG00000002327	HNRNPD	98	74.182	Tupaia_belangeri
ENSGAFG00000003714	hnrnpd	88	74.419	ENSTTRG00000007592	HNRNPD	83	76.333	Tursiops_truncatus
ENSGAFG00000003714	hnrnpd	87	82.648	ENSUAMG00000011374	HNRNPD	70	82.648	Ursus_americanus
ENSGAFG00000003714	hnrnpd	87	82.648	ENSUMAG00000008685	HNRNPD	83	80.292	Ursus_maritimus
ENSGAFG00000003714	hnrnpd	94	79.545	ENSVPAG00000004374	HNRNPD	100	82.576	Vicugna_pacos
ENSGAFG00000003714	hnrnpd	88	74.419	ENSVVUG00000024658	HNRNPD	83	76.333	Vulpes_vulpes
ENSGAFG00000003714	hnrnpd	89	73.498	ENSXETG00000012569	hnrnpd	93	73.852	Xenopus_tropicalis
ENSGAFG00000003714	hnrnpd	92	96.958	ENSXCOG00000017639	hnrnpd	100	96.958	Xiphophorus_couchianus
ENSGAFG00000003714	hnrnpd	100	97.508	ENSXMAG00000019151	hnrnpd	100	97.508	Xiphophorus_maculatus