EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000003746 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: si:ch211-212k18.5
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6282 bases
Position: chrNHOQ01000739.1:1294117-1300398
Accession: ZDB-GENE-030131-379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005502	zf-C2H2	PF00096.26	2.5e-18	1	2
ENSGAFP00000005502	zf-C2H2	PF00096.26	2.5e-18	2	2
ENSGAFP00000005505	zf-C2H2	PF00096.26	2.6e-18	1	2
ENSGAFP00000005505	zf-C2H2	PF00096.26	2.6e-18	2	2
ENSGAFP00000005505	zf-met	PF12874.7	5e-10	1	2
ENSGAFP00000005505	zf-met	PF12874.7	5e-10	2	2
ENSGAFP00000005502	zf-met	PF12874.7	5.4e-10	1	2
ENSGAFP00000005502	zf-met	PF12874.7	5.4e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005563	-	4637	-	ENSGAFP00000005502	1209 (aa)	-	-
ENSGAFT00000005566	-	4565	-	ENSGAFP00000005505	1185 (aa)	-	UPI000DD1C18A

Gene Model

Click here to download ENSGAFG00000003746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003746's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000003746	si:ch211-212k18.5	56	69.697	ENSGAFG00000015194	sall2	61	69.697

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003746	si:ch211-212k18.5	72	70.270	ENSAPOG00000015347	sall2	50	73.333	Acanthochromis_polyacanthus
ENSGAFG00000003746	si:ch211-212k18.5	99	74.267	ENSAPOG00000013387	si:ch211-212k18.5	99	74.104	Acanthochromis_polyacanthus
ENSGAFG00000003746	si:ch211-212k18.5	80	80.103	ENSACIG00000019922	si:ch211-212k18.5	99	80.805	Amphilophus_citrinellus
ENSGAFG00000003746	si:ch211-212k18.5	99	71.568	ENSAOCG00000010737	si:ch211-212k18.5	99	71.812	Amphiprion_ocellaris
ENSGAFG00000003746	si:ch211-212k18.5	72	70.270	ENSAOCG00000016559	sall2	50	73.333	Amphiprion_ocellaris
ENSGAFG00000003746	si:ch211-212k18.5	54	46.827	ENSAPEG00000020215	sall2	72	73.333	Amphiprion_percula
ENSGAFG00000003746	si:ch211-212k18.5	99	71.812	ENSAPEG00000006751	si:ch211-212k18.5	99	72.055	Amphiprion_percula
ENSGAFG00000003746	si:ch211-212k18.5	54	46.105	ENSATEG00000007303	sall2	52	71.111	Anabas_testudineus
ENSGAFG00000003746	si:ch211-212k18.5	79	81.395	ENSATEG00000001254	si:ch211-212k18.5	99	81.512	Anabas_testudineus
ENSGAFG00000003746	si:ch211-212k18.5	80	39.557	ENSACLG00000019867	sall2	80	75.556	Astatotilapia_calliptera
ENSGAFG00000003746	si:ch211-212k18.5	99	72.003	ENSACLG00000009709	si:ch211-212k18.5	99	72.281	Astatotilapia_calliptera
ENSGAFG00000003746	si:ch211-212k18.5	54	49.857	ENSAMXG00000020956	sall2	57	49.057	Astyanax_mexicanus
ENSGAFG00000003746	si:ch211-212k18.5	95	55.955	ENSAMXG00000010979	si:ch211-212k18.5	99	53.663	Astyanax_mexicanus
ENSGAFG00000003746	si:ch211-212k18.5	99	68.211	ENSCSEG00000004426	si:ch211-212k18.5	99	67.561	Cynoglossus_semilaevis
ENSGAFG00000003746	si:ch211-212k18.5	64	48.289	ENSCVAG00000006032	sall2	62	72.727	Cyprinodon_variegatus
ENSGAFG00000003746	si:ch211-212k18.5	99	85.691	ENSCVAG00000007475	si:ch211-212k18.5	99	86.600	Cyprinodon_variegatus
ENSGAFG00000003746	si:ch211-212k18.5	99	53.198	ENSDARG00000103316	si:ch211-212k18.5	99	52.263	Danio_rerio
ENSGAFG00000003746	si:ch211-212k18.5	99	55.812	ENSELUG00000024534	si:ch211-212k18.5	99	55.847	Esox_lucius
ENSGAFG00000003746	si:ch211-212k18.5	72	72.222	ENSELUG00000004389	sall2	62	60.870	Esox_lucius
ENSGAFG00000003746	si:ch211-212k18.5	99	85.856	ENSFHEG00000017264	si:ch211-212k18.5	99	86.600	Fundulus_heteroclitus
ENSGAFG00000003746	si:ch211-212k18.5	54	46.912	ENSFHEG00000017550	sall2	59	46.729	Fundulus_heteroclitus
ENSGAFG00000003746	si:ch211-212k18.5	95	39.592	ENSHBUG00000002882	sall2	69	39.780	Haplochromis_burtoni
ENSGAFG00000003746	si:ch211-212k18.5	99	72.167	ENSHBUG00000019672	si:ch211-212k18.5	99	72.957	Haplochromis_burtoni
ENSGAFG00000003746	si:ch211-212k18.5	98	58.734	ENSHCOG00000002842	si:ch211-212k18.5	99	56.975	Hippocampus_comes
ENSGAFG00000003746	si:ch211-212k18.5	99	52.451	ENSIPUG00000002559	sall2	99	52.128	Ictalurus_punctatus
ENSGAFG00000003746	si:ch211-212k18.5	54	47.809	ENSKMAG00000020172	sall2	50	71.111	Kryptolebias_marmoratus
ENSGAFG00000003746	si:ch211-212k18.5	100	74.430	ENSKMAG00000019657	si:ch211-212k18.5	100	74.430	Kryptolebias_marmoratus
ENSGAFG00000003746	si:ch211-212k18.5	100	68.842	ENSLBEG00000020887	si:ch211-212k18.5	99	68.571	Labrus_bergylta
ENSGAFG00000003746	si:ch211-212k18.5	70	83.509	ENSMAMG00000015887	si:ch211-212k18.5	99	83.275	Mastacembelus_armatus
ENSGAFG00000003746	si:ch211-212k18.5	63	46.065	ENSMAMG00000016229	sall2	56	48.071	Mastacembelus_armatus
ENSGAFG00000003746	si:ch211-212k18.5	95	39.592	ENSMZEG00005012103	sall2	69	39.780	Maylandia_zebra
ENSGAFG00000003746	si:ch211-212k18.5	99	72.085	ENSMZEG00005021214	si:ch211-212k18.5	99	72.363	Maylandia_zebra
ENSGAFG00000003746	si:ch211-212k18.5	95	79.599	ENSMMOG00000012726	si:ch211-212k18.5	99	79.822	Mola_mola
ENSGAFG00000003746	si:ch211-212k18.5	92	72.997	ENSMALG00000000979	si:ch211-212k18.5	97	73.258	Monopterus_albus
ENSGAFG00000003746	si:ch211-212k18.5	94	69.284	ENSNBRG00000023948	si:ch211-212k18.5	96	68.767	Neolamprologus_brichardi
ENSGAFG00000003746	si:ch211-212k18.5	95	40.762	ENSNBRG00000017645	sall2	84	41.129	Neolamprologus_brichardi
ENSGAFG00000003746	si:ch211-212k18.5	54	45.718	ENSORLG00000026871	sall2	90	39.058	Oryzias_latipes
ENSGAFG00000003746	si:ch211-212k18.5	100	69.036	ENSORLG00000030429	si:ch211-212k18.5	100	68.954	Oryzias_latipes
ENSGAFG00000003746	si:ch211-212k18.5	100	68.847	ENSORLG00020008145	si:ch211-212k18.5	100	69.199	Oryzias_latipes_hni
ENSGAFG00000003746	si:ch211-212k18.5	54	46.042	ENSORLG00020007873	sall2	90	38.918	Oryzias_latipes_hni
ENSGAFG00000003746	si:ch211-212k18.5	54	45.191	ENSORLG00015002422	sall2	90	38.710	Oryzias_latipes_hsok
ENSGAFG00000003746	si:ch211-212k18.5	99	68.607	ENSORLG00015004982	si:ch211-212k18.5	100	68.791	Oryzias_latipes_hsok
ENSGAFG00000003746	si:ch211-212k18.5	60	56.522	ENSOMEG00000012904	sall2	65	56.522	Oryzias_melastigma
ENSGAFG00000003746	si:ch211-212k18.5	99	68.485	ENSOMEG00000013949	si:ch211-212k18.5	99	69.655	Oryzias_melastigma
ENSGAFG00000003746	si:ch211-212k18.5	72	49.788	ENSPKIG00000009207	sall2	84	50.209	Paramormyrops_kingsleyae
ENSGAFG00000003746	si:ch211-212k18.5	94	65.294	ENSPMGG00000018714	si:ch211-212k18.5	99	65.133	Periophthalmus_magnuspinnatus
ENSGAFG00000003746	si:ch211-212k18.5	62	47.594	ENSPFOG00000016504	sall2	61	69.697	Poecilia_formosa
ENSGAFG00000003746	si:ch211-212k18.5	99	95.578	ENSPFOG00000023705	si:ch211-212k18.5	100	95.527	Poecilia_formosa
ENSGAFG00000003746	si:ch211-212k18.5	99	94.255	ENSPLAG00000002577	si:ch211-212k18.5	100	94.959	Poecilia_latipinna
ENSGAFG00000003746	si:ch211-212k18.5	62	47.727	ENSPLAG00000018320	sall2	61	69.697	Poecilia_latipinna
ENSGAFG00000003746	si:ch211-212k18.5	62	47.326	ENSPMEG00000006335	sall2	61	69.697	Poecilia_mexicana
ENSGAFG00000003746	si:ch211-212k18.5	99	95.250	ENSPMEG00000016395	si:ch211-212k18.5	100	94.045	Poecilia_mexicana
ENSGAFG00000003746	si:ch211-212k18.5	100	93.802	ENSPREG00000005292	si:ch211-212k18.5	100	94.545	Poecilia_reticulata
ENSGAFG00000003746	si:ch211-212k18.5	99	68.745	ENSPNYG00000021576	si:ch211-212k18.5	99	68.683	Pundamilia_nyererei
ENSGAFG00000003746	si:ch211-212k18.5	95	56.034	ENSPNAG00000006123	si:ch211-212k18.5	94	57.131	Pygocentrus_nattereri
ENSGAFG00000003746	si:ch211-212k18.5	74	55.385	ENSSMAG00000014157	sall2	57	55.385	Scophthalmus_maximus
ENSGAFG00000003746	si:ch211-212k18.5	100	70.732	ENSSMAG00000006241	si:ch211-212k18.5	99	70.041	Scophthalmus_maximus
ENSGAFG00000003746	si:ch211-212k18.5	100	74.311	ENSSDUG00000006164	si:ch211-212k18.5	99	74.209	Seriola_dumerili
ENSGAFG00000003746	si:ch211-212k18.5	72	67.568	ENSSDUG00000012274	sall2	57	50.769	Seriola_dumerili
ENSGAFG00000003746	si:ch211-212k18.5	72	67.568	ENSSLDG00000001653	sall2	57	50.769	Seriola_lalandi_dorsalis
ENSGAFG00000003746	si:ch211-212k18.5	100	75.932	ENSSLDG00000003393	si:ch211-212k18.5	99	75.831	Seriola_lalandi_dorsalis
ENSGAFG00000003746	si:ch211-212k18.5	94	73.661	ENSSPAG00000013435	si:ch211-212k18.5	97	73.661	Stegastes_partitus
ENSGAFG00000003746	si:ch211-212k18.5	54	48.031	ENSSPAG00000023009	sall2	53	47.222	Stegastes_partitus
ENSGAFG00000003746	si:ch211-212k18.5	94	70.807	ENSTRUG00000025082	si:ch211-212k18.5	98	70.175	Takifugu_rubripes
ENSGAFG00000003746	si:ch211-212k18.5	100	94.467	ENSXCOG00000000762	si:ch211-212k18.5	100	94.467	Xiphophorus_couchianus
ENSGAFG00000003746	si:ch211-212k18.5	100	96.532	ENSXMAG00000001461	si:ch211-212k18.5	100	96.532	Xiphophorus_maculatus