EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000003916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 561 bases
Position: chrNHOQ01002617.1:1-561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000005757	MMR_HSR1	PF01926.23	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000005822	-	354	-	ENSGAFP00000005757	118 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000003916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000003916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000003916	-	79	93.548	ENSGAFG00000000209	-	53	93.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000003916	-	86	46.667	ENSAPOG00000001262	-	51	46.667	Acanthochromis_polyacanthus
ENSGAFG00000003916	-	81	39.583	ENSAPOG00000007361	-	54	39.583	Acanthochromis_polyacanthus
ENSGAFG00000003916	-	77	49.451	ENSACIG00000001465	-	55	49.451	Amphilophus_citrinellus
ENSGAFG00000003916	-	72	40.698	ENSAOCG00000012536	-	67	40.698	Amphiprion_ocellaris
ENSGAFG00000003916	-	81	40.625	ENSAOCG00000011143	-	56	40.625	Amphiprion_ocellaris
ENSGAFG00000003916	-	54	48.529	ENSAPEG00000021785	-	75	48.529	Amphiprion_percula
ENSGAFG00000003916	-	77	42.391	ENSAPEG00000018782	-	61	42.391	Amphiprion_percula
ENSGAFG00000003916	-	57	47.761	ENSACLG00000005151	-	63	47.761	Astatotilapia_calliptera
ENSGAFG00000003916	-	79	53.763	ENSACLG00000021980	-	69	53.191	Astatotilapia_calliptera
ENSGAFG00000003916	-	57	47.761	ENSACLG00000010743	-	62	47.761	Astatotilapia_calliptera
ENSGAFG00000003916	-	86	51.485	ENSACLG00000003287	-	52	51.485	Astatotilapia_calliptera
ENSGAFG00000003916	-	97	41.606	ENSAMXG00000029911	-	87	41.606	Astyanax_mexicanus
ENSGAFG00000003916	-	80	52.128	ENSAMXG00000037339	-	65	52.128	Astyanax_mexicanus
ENSGAFG00000003916	-	84	53.191	ENSAMXG00000002562	-	65	53.191	Astyanax_mexicanus
ENSGAFG00000003916	-	82	43.299	ENSAMXG00000038694	-	65	43.299	Astyanax_mexicanus
ENSGAFG00000003916	-	91	34.579	ENSAMXG00000036272	-	55	37.000	Astyanax_mexicanus
ENSGAFG00000003916	-	86	42.574	ENSCVAG00000021672	-	50	42.574	Cyprinodon_variegatus
ENSGAFG00000003916	-	82	47.000	ENSCVAG00000009848	-	50	47.000	Cyprinodon_variegatus
ENSGAFG00000003916	-	80	52.083	ENSCVAG00000017220	-	56	52.083	Cyprinodon_variegatus
ENSGAFG00000003916	-	79	56.383	ENSDARG00000078182	zgc:194443	69	50.667	Danio_rerio
ENSGAFG00000003916	-	79	52.688	ENSDARG00000103883	si:ch1073-181h11.2	63	52.688	Danio_rerio
ENSGAFG00000003916	-	53	52.381	ENSHBUG00000015901	-	66	52.381	Haplochromis_burtoni
ENSGAFG00000003916	-	79	50.538	ENSHBUG00000023810	-	62	50.538	Haplochromis_burtoni
ENSGAFG00000003916	-	80	50.000	ENSHBUG00000010422	-	50	50.000	Haplochromis_burtoni
ENSGAFG00000003916	-	81	50.526	ENSKMAG00000001775	-	71	50.526	Kryptolebias_marmoratus
ENSGAFG00000003916	-	79	45.161	ENSLBEG00000011881	-	56	45.161	Labrus_bergylta
ENSGAFG00000003916	-	86	47.368	ENSLOCG00000011883	-	53	47.368	Lepisosteus_oculatus
ENSGAFG00000003916	-	79	53.763	ENSMZEG00005006466	-	57	53.763	Maylandia_zebra
ENSGAFG00000003916	-	85	42.157	ENSMZEG00005006491	-	52	42.157	Maylandia_zebra
ENSGAFG00000003916	-	87	49.057	ENSMZEG00005020549	-	68	49.057	Maylandia_zebra
ENSGAFG00000003916	-	57	47.761	ENSMZEG00005002838	-	58	47.761	Maylandia_zebra
ENSGAFG00000003916	-	84	47.619	ENSMMOG00000021432	-	54	47.619	Mola_mola
ENSGAFG00000003916	-	81	43.750	ENSNBRG00000024164	-	73	43.750	Neolamprologus_brichardi
ENSGAFG00000003916	-	80	51.064	ENSONIG00000016464	-	50	51.064	Oreochromis_niloticus
ENSGAFG00000003916	-	80	52.128	ENSPKIG00000017979	-	57	52.128	Paramormyrops_kingsleyae
ENSGAFG00000003916	-	85	44.000	ENSPFOG00000001141	-	53	44.000	Poecilia_formosa
ENSGAFG00000003916	-	78	48.913	ENSPLAG00000017599	-	64	48.387	Poecilia_latipinna
ENSGAFG00000003916	-	85	46.000	ENSPLAG00000010124	-	52	46.000	Poecilia_latipinna
ENSGAFG00000003916	-	89	46.226	ENSPLAG00000017588	-	63	46.226	Poecilia_latipinna
ENSGAFG00000003916	-	89	46.226	ENSPMEG00000019918	-	63	46.226	Poecilia_mexicana
ENSGAFG00000003916	-	76	50.000	ENSPREG00000006000	-	50	50.000	Poecilia_reticulata
ENSGAFG00000003916	-	79	43.011	ENSPNYG00000005037	-	53	43.011	Pundamilia_nyererei
ENSGAFG00000003916	-	88	47.619	ENSPNYG00000004876	-	54	47.619	Pundamilia_nyererei
ENSGAFG00000003916	-	80	48.958	ENSPNAG00000014098	-	66	48.958	Pygocentrus_nattereri
ENSGAFG00000003916	-	86	45.545	ENSPNAG00000014125	-	57	45.545	Pygocentrus_nattereri
ENSGAFG00000003916	-	79	46.237	ENSPNAG00000015718	-	60	46.237	Pygocentrus_nattereri
ENSGAFG00000003916	-	83	56.122	ENSSFOG00015006012	-	50	56.122	Scleropages_formosus
ENSGAFG00000003916	-	75	45.455	ENSSDUG00000021711	-	58	45.455	Seriola_dumerili
ENSGAFG00000003916	-	83	39.796	ENSSDUG00000019892	-	61	43.750	Seriola_dumerili
ENSGAFG00000003916	-	81	48.958	ENSSLDG00000009698	-	77	48.958	Seriola_lalandi_dorsalis
ENSGAFG00000003916	-	81	48.958	ENSSLDG00000013130	-	73	48.958	Seriola_lalandi_dorsalis
ENSGAFG00000003916	-	79	51.579	ENSSPAG00000015591	-	58	51.579	Stegastes_partitus
ENSGAFG00000003916	-	79	49.462	ENSSPAG00000015600	-	53	49.462	Stegastes_partitus
ENSGAFG00000003916	-	81	46.392	ENSXCOG00000014519	-	68	46.392	Xiphophorus_couchianus
ENSGAFG00000003916	-	79	56.989	ENSXCOG00000018333	-	64	56.989	Xiphophorus_couchianus
ENSGAFG00000003916	-	81	54.737	ENSXMAG00000026760	-	52	54.737	Xiphophorus_maculatus