EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004055 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 12893 bases
Position: chrNHOQ01000739.1:1380430-1393322
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006036	ResIII	PF04851.15	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006103	-	3363	-	ENSGAFP00000006036	1120 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004055	chd3	94	68.527	ENSGAFG00000014337	-	93	74.209
ENSGAFG00000004055	chd3	94	71.220	ENSGAFG00000002778	chd4a	57	71.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004055	chd3	99	76.581	ENSG00000170004	CHD3	98	69.157	Homo_sapiens
ENSGAFG00000004055	chd3	91	87.736	ENSAPOG00000005614	chd3	64	86.862	Acanthochromis_polyacanthus
ENSGAFG00000004055	chd3	92	89.276	ENSACIG00000019671	chd3	68	90.292	Amphilophus_citrinellus
ENSGAFG00000004055	chd3	99	89.983	ENSAOCG00000023784	chd3	66	88.679	Amphiprion_ocellaris
ENSGAFG00000004055	chd3	99	89.897	ENSAPEG00000006341	chd3	56	86.387	Amphiprion_percula
ENSGAFG00000004055	chd3	99	88.974	ENSATEG00000000848	chd3	64	84.196	Anabas_testudineus
ENSGAFG00000004055	chd3	99	77.367	ENSACAG00000004276	CHD3	54	78.752	Anolis_carolinensis
ENSGAFG00000004055	chd3	95	78.195	ENSANAG00000034323	CHD3	59	76.744	Aotus_nancymaae
ENSGAFG00000004055	chd3	99	89.336	ENSACLG00000009222	chd3	93	87.191	Astatotilapia_calliptera
ENSGAFG00000004055	chd3	99	76.415	ENSBTAG00000014377	CHD3	59	75.815	Bos_taurus
ENSGAFG00000004055	chd3	99	76.838	ENSCJAG00000014766	CHD3	59	74.915	Callithrix_jacchus
ENSGAFG00000004055	chd3	99	76.561	ENSCAFG00000016859	CHD3	58	75.149	Canis_familiaris
ENSGAFG00000004055	chd3	95	78.265	ENSCAFG00020007422	CHD3	60	77.171	Canis_lupus_dingo
ENSGAFG00000004055	chd3	99	76.496	ENSCHIG00000016737	CHD3	59	75.171	Capra_hircus
ENSGAFG00000004055	chd3	99	76.581	ENSTSYG00000035658	CHD3	59	74.915	Carlito_syrichta
ENSGAFG00000004055	chd3	99	72.650	ENSCAPG00000014864	CHD3	57	70.563	Cavia_aperea
ENSGAFG00000004055	chd3	99	76.752	ENSCPOG00000022653	CHD3	58	74.403	Cavia_porcellus
ENSGAFG00000004055	chd3	99	76.581	ENSCCAG00000034792	CHD3	58	74.915	Cebus_capucinus
ENSGAFG00000004055	chd3	99	76.496	ENSCATG00000041717	CHD3	59	74.829	Cercocebus_atys
ENSGAFG00000004055	chd3	99	76.410	ENSCLAG00000010523	CHD3	60	74.829	Chinchilla_lanigera
ENSGAFG00000004055	chd3	99	76.415	ENSCSAG00000011122	CHD3	59	75.643	Chlorocebus_sabaeus
ENSGAFG00000004055	chd3	98	80.479	ENSCPBG00000011966	CHD3	92	79.019	Chrysemys_picta_bellii
ENSGAFG00000004055	chd3	99	76.496	ENSCANG00000037641	CHD3	59	76.966	Colobus_angolensis_palliatus
ENSGAFG00000004055	chd3	99	75.470	ENSCGRG00001011306	Chd3	60	74.744	Cricetulus_griseus_chok1gshd
ENSGAFG00000004055	chd3	90	79.439	ENSCGRG00000007878	Chd3	59	78.415	Cricetulus_griseus_crigri
ENSGAFG00000004055	chd3	99	89.151	ENSCSEG00000004489	chd3	63	88.451	Cynoglossus_semilaevis
ENSGAFG00000004055	chd3	99	93.554	ENSCVAG00000007293	chd3	63	93.554	Cyprinodon_variegatus
ENSGAFG00000004055	chd3	99	84.602	ENSDARG00000021405	chd3	62	84.427	Danio_rerio
ENSGAFG00000004055	chd3	99	76.581	ENSDORG00000010713	Chd3	60	74.915	Dipodomys_ordii
ENSGAFG00000004055	chd3	99	69.113	ENSETEG00000017733	CHD3	58	70.483	Echinops_telfairi
ENSGAFG00000004055	chd3	91	78.538	ENSEASG00005019360	CHD3	59	77.378	Equus_asinus_asinus
ENSGAFG00000004055	chd3	91	78.538	ENSECAG00000010051	CHD3	59	77.378	Equus_caballus
ENSGAFG00000004055	chd3	98	70.377	ENSEEUG00000015205	CHD3	59	69.316	Erinaceus_europaeus
ENSGAFG00000004055	chd3	91	84.516	ENSELUG00000019499	chd3	69	84.516	Esox_lucius
ENSGAFG00000004055	chd3	99	76.752	ENSFCAG00000009629	CHD3	57	75.085	Felis_catus
ENSGAFG00000004055	chd3	95	78.175	ENSFDAG00000008220	CHD3	56	76.723	Fukomys_damarensis
ENSGAFG00000004055	chd3	99	70.704	ENSGMOG00000013599	chd3	57	83.964	Gadus_morhua
ENSGAFG00000004055	chd3	99	79.574	ENSGACG00000019275	chd3	59	77.703	Gasterosteus_aculeatus
ENSGAFG00000004055	chd3	82	81.723	ENSGAGG00000013164	CHD3	69	77.329	Gopherus_agassizii
ENSGAFG00000004055	chd3	99	76.581	ENSGGOG00000013496	CHD3	59	77.058	Gorilla_gorilla
ENSGAFG00000004055	chd3	99	76.325	ENSHGLG00000012017	CHD3	59	74.659	Heterocephalus_glaber_female
ENSGAFG00000004055	chd3	86	66.413	ENSHGLG00100013902	CHD3	61	63.788	Heterocephalus_glaber_male
ENSGAFG00000004055	chd3	99	85.593	ENSHCOG00000010170	chd3	58	83.051	Hippocampus_comes
ENSGAFG00000004055	chd3	92	83.932	ENSIPUG00000003271	chd3	61	83.743	Ictalurus_punctatus
ENSGAFG00000004055	chd3	99	76.496	ENSSTOG00000025907	CHD3	60	75.000	Ictidomys_tridecemlineatus
ENSGAFG00000004055	chd3	99	76.496	ENSJJAG00000017633	Chd3	60	74.659	Jaculus_jaculus
ENSGAFG00000004055	chd3	99	92.342	ENSKMAG00000019292	chd3	62	88.194	Kryptolebias_marmoratus
ENSGAFG00000004055	chd3	99	87.018	ENSLBEG00000028485	chd3	61	86.240	Labrus_bergylta
ENSGAFG00000004055	chd3	98	76.481	ENSLACG00000008031	CHD3	56	77.171	Latimeria_chalumnae
ENSGAFG00000004055	chd3	99	82.236	ENSLOCG00000013965	chd3	56	82.594	Lepisosteus_oculatus
ENSGAFG00000004055	chd3	99	73.969	ENSLAFG00000000572	CHD3	57	82.554	Loxodonta_africana
ENSGAFG00000004055	chd3	99	76.496	ENSMFAG00000020113	CHD3	59	76.966	Macaca_fascicularis
ENSGAFG00000004055	chd3	99	76.496	ENSMMUG00000022221	CHD3	59	74.829	Macaca_mulatta
ENSGAFG00000004055	chd3	99	76.496	ENSMNEG00000001728	CHD3	59	76.966	Macaca_nemestrina
ENSGAFG00000004055	chd3	99	76.496	ENSMLEG00000032249	CHD3	59	74.829	Mandrillus_leucophaeus
ENSGAFG00000004055	chd3	91	92.000	ENSMAMG00000000564	chd3	64	92.000	Mastacembelus_armatus
ENSGAFG00000004055	chd3	99	75.043	ENSMAUG00000013873	Chd3	59	76.629	Mesocricetus_auratus
ENSGAFG00000004055	chd3	99	76.581	ENSMICG00000008741	CHD3	57	74.915	Microcebus_murinus
ENSGAFG00000004055	chd3	99	75.299	ENSMOCG00000004848	Chd3	60	74.659	Microtus_ochrogaster
ENSGAFG00000004055	chd3	99	86.987	ENSMMOG00000012699	chd3	62	85.925	Mola_mola
ENSGAFG00000004055	chd3	91	78.006	ENSMODG00000007509	CHD3	60	77.633	Monodelphis_domestica
ENSGAFG00000004055	chd3	99	76.068	MGP_CAROLIEiJ_G0016564	Chd3	62	74.872	Mus_caroli
ENSGAFG00000004055	chd3	99	75.983	ENSMUSG00000018474	Chd3	62	74.872	Mus_musculus
ENSGAFG00000004055	chd3	99	76.219	MGP_PahariEiJ_G0017695	Chd3	62	75.107	Mus_pahari
ENSGAFG00000004055	chd3	99	76.068	MGP_SPRETEiJ_G0017400	Chd3	62	74.872	Mus_spretus
ENSGAFG00000004055	chd3	82	80.084	ENSMPUG00000008861	CHD3	56	78.826	Mustela_putorius_furo
ENSGAFG00000004055	chd3	99	75.597	ENSMLUG00000014643	-	58	74.786	Myotis_lucifugus
ENSGAFG00000004055	chd3	99	76.325	ENSNGAG00000000773	Chd3	58	74.744	Nannospalax_galili
ENSGAFG00000004055	chd3	92	88.280	ENSNBRG00000000636	chd3	63	88.280	Neolamprologus_brichardi
ENSGAFG00000004055	chd3	99	75.901	ENSNLEG00000009770	CHD3	61	74.232	Nomascus_leucogenys
ENSGAFG00000004055	chd3	89	73.762	ENSMEUG00000005852	CHD3	55	73.762	Notamacropus_eugenii
ENSGAFG00000004055	chd3	95	77.281	ENSOPRG00000011069	CHD3	59	76.007	Ochotona_princeps
ENSGAFG00000004055	chd3	99	76.410	ENSODEG00000017785	CHD3	59	74.744	Octodon_degus
ENSGAFG00000004055	chd3	99	89.492	ENSONIG00000009292	chd3	61	87.861	Oreochromis_niloticus
ENSGAFG00000004055	chd3	99	74.979	ENSOCUG00000029299	CHD3	59	73.061	Oryctolagus_cuniculus
ENSGAFG00000004055	chd3	99	87.234	ENSORLG00000007107	chd3	68	85.488	Oryzias_latipes
ENSGAFG00000004055	chd3	95	86.368	ENSORLG00020008387	chd3	76	90.426	Oryzias_latipes_hni
ENSGAFG00000004055	chd3	90	90.840	ENSOMEG00000013691	chd3	64	88.626	Oryzias_melastigma
ENSGAFG00000004055	chd3	99	76.496	ENSOGAG00000003216	CHD3	59	74.744	Otolemur_garnettii
ENSGAFG00000004055	chd3	99	75.586	ENSOARG00000017855	CHD3	57	75.152	Ovis_aries
ENSGAFG00000004055	chd3	99	76.239	ENSPPAG00000032886	CHD3	58	76.781	Pan_paniscus
ENSGAFG00000004055	chd3	99	76.667	ENSPPRG00000000626	CHD3	59	75.085	Panthera_pardus
ENSGAFG00000004055	chd3	99	76.581	ENSPTRG00000008714	CHD3	59	77.058	Pan_troglodytes
ENSGAFG00000004055	chd3	99	76.496	ENSPANG00000023938	CHD3	59	76.966	Papio_anubis
ENSGAFG00000004055	chd3	99	84.867	ENSPKIG00000006305	chd3	60	82.643	Paramormyrops_kingsleyae
ENSGAFG00000004055	chd3	82	79.487	ENSPSIG00000010177	CHD3	87	78.122	Pelodiscus_sinensis
ENSGAFG00000004055	chd3	99	75.470	ENSPEMG00000014262	Chd3	59	74.659	Peromyscus_maniculatus_bairdii
ENSGAFG00000004055	chd3	96	82.161	ENSPCIG00000005442	CHD3	62	77.564	Phascolarctos_cinereus
ENSGAFG00000004055	chd3	99	93.322	ENSPFOG00000012464	chd3	55	93.322	Poecilia_formosa
ENSGAFG00000004055	chd3	99	92.383	ENSPLAG00000002887	chd3	74	94.887	Poecilia_latipinna
ENSGAFG00000004055	chd3	95	92.159	ENSPMEG00000016725	chd3	91	92.159	Poecilia_mexicana
ENSGAFG00000004055	chd3	99	94.978	ENSPREG00000011044	chd3	63	94.978	Poecilia_reticulata
ENSGAFG00000004055	chd3	99	74.213	ENSPPYG00000007940	CHD3	59	72.797	Pongo_abelii
ENSGAFG00000004055	chd3	92	85.430	ENSPCAG00000004350	CHD3	56	85.265	Procavia_capensis
ENSGAFG00000004055	chd3	99	76.581	ENSPCOG00000020952	CHD3	58	74.915	Propithecus_coquereli
ENSGAFG00000004055	chd3	99	86.061	ENSPNAG00000020393	chd3	63	85.108	Pygocentrus_nattereri
ENSGAFG00000004055	chd3	91	77.798	ENSRNOG00000009722	Chd3	59	76.688	Rattus_norvegicus
ENSGAFG00000004055	chd3	99	75.171	ENSRBIG00000033562	CHD3	58	75.856	Rhinopithecus_bieti
ENSGAFG00000004055	chd3	99	76.496	ENSRROG00000029554	CHD3	58	76.966	Rhinopithecus_roxellana
ENSGAFG00000004055	chd3	99	76.581	ENSSBOG00000020719	CHD3	59	77.058	Saimiri_boliviensis_boliviensis
ENSGAFG00000004055	chd3	99	76.345	ENSSHAG00000014412	CHD3	61	74.169	Sarcophilus_harrisii
ENSGAFG00000004055	chd3	85	87.870	ENSSFOG00015023123	chd3	58	76.471	Scleropages_formosus
ENSGAFG00000004055	chd3	91	90.255	ENSSMAG00000006451	chd3	64	88.458	Scophthalmus_maximus
ENSGAFG00000004055	chd3	92	88.102	ENSSDUG00000005792	chd3	76	91.021	Seriola_dumerili
ENSGAFG00000004055	chd3	99	89.915	ENSSPAG00000013694	chd3	67	90.781	Stegastes_partitus
ENSGAFG00000004055	chd3	99	76.587	ENSSSCG00000021363	CHD3	63	78.366	Sus_scrofa
ENSGAFG00000004055	chd3	99	89.405	ENSTRUG00000014990	chd3	69	88.147	Takifugu_rubripes
ENSGAFG00000004055	chd3	99	85.211	ENSTNIG00000012998	chd3	60	83.391	Tetraodon_nigroviridis
ENSGAFG00000004055	chd3	74	70.146	ENSTBEG00000011454	-	50	69.369	Tupaia_belangeri
ENSGAFG00000004055	chd3	97	81.576	ENSTTRG00000010295	CHD3	56	81.576	Tursiops_truncatus
ENSGAFG00000004055	chd3	99	75.175	ENSUAMG00000005475	CHD3	62	73.596	Ursus_americanus
ENSGAFG00000004055	chd3	99	76.561	ENSVVUG00000028011	CHD3	58	77.171	Vulpes_vulpes
ENSGAFG00000004055	chd3	98	67.333	ENSXETG00000012991	chd3	53	68.478	Xenopus_tropicalis
ENSGAFG00000004055	chd3	93	95.485	ENSXCOG00000000809	chd3	94	95.485	Xiphophorus_couchianus
ENSGAFG00000004055	chd3	91	94.513	ENSXMAG00000016035	chd3	68	94.513	Xiphophorus_maculatus