EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000004166 (Gene tree)
Gene ID: -
Gene Symbol: fbxo18
Alias: si:dkey-22l11.2
Full Name: F-box DNA helicase 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 21433 bases
Position: chrNHOQ01001156.1:16910884-16932316
Accession: ZDB-GENE-041210-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006116	UvrD-helicase	PF00580.21	3.5e-11	1	1
ENSGAFP00000006132	UvrD-helicase	PF00580.21	3.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006184	-	4848	-	ENSGAFP00000006116	1016 (aa)	-	-
ENSGAFT00000006200	-	3675	-	ENSGAFP00000006132	1054 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004166's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004166	fbxo18	99	40.897	ENSG00000134452	FBH1	99	40.754	Homo_sapiens
ENSGAFG00000004166	fbxo18	99	66.357	ENSAPOG00000007042	fbxo18	100	65.833	Acanthochromis_polyacanthus
ENSGAFG00000004166	fbxo18	99	41.468	ENSAMEG00000002043	FBH1	81	45.187	Ailuropoda_melanoleuca
ENSGAFG00000004166	fbxo18	99	61.923	ENSACIG00000006171	fbxo18	99	61.828	Amphilophus_citrinellus
ENSGAFG00000004166	fbxo18	99	65.738	ENSAOCG00000014826	fbxo18	100	65.738	Amphiprion_ocellaris
ENSGAFG00000004166	fbxo18	99	65.246	ENSAPEG00000022846	fbxo18	100	65.246	Amphiprion_percula
ENSGAFG00000004166	fbxo18	99	63.281	ENSATEG00000004547	fbxo18	100	63.281	Anabas_testudineus
ENSGAFG00000004166	fbxo18	96	38.041	ENSAPLG00000009754	FBH1	99	37.618	Anas_platyrhynchos
ENSGAFG00000004166	fbxo18	83	42.560	ENSACAG00000002729	FBH1	82	42.905	Anolis_carolinensis
ENSGAFG00000004166	fbxo18	99	40.771	ENSANAG00000032436	FBH1	99	40.496	Aotus_nancymaae
ENSGAFG00000004166	fbxo18	100	66.422	ENSACLG00000004266	fbxo18	100	70.201	Astatotilapia_calliptera
ENSGAFG00000004166	fbxo18	93	48.095	ENSAMXG00000020772	fbxo18	98	48.095	Astyanax_mexicanus
ENSGAFG00000004166	fbxo18	99	40.590	ENSBTAG00000004147	FBH1	82	44.570	Bos_taurus
ENSGAFG00000004166	fbxo18	99	40.680	ENSCJAG00000020531	FBH1	99	40.737	Callithrix_jacchus
ENSGAFG00000004166	fbxo18	85	44.057	ENSCAFG00000005218	FBH1	88	44.859	Canis_familiaris
ENSGAFG00000004166	fbxo18	85	44.057	ENSCAFG00020005396	FBH1	88	44.859	Canis_lupus_dingo
ENSGAFG00000004166	fbxo18	99	40.686	ENSCHIG00000016303	FBH1	82	44.118	Capra_hircus
ENSGAFG00000004166	fbxo18	99	39.227	ENSCPOG00000010580	FBH1	81	42.500	Cavia_porcellus
ENSGAFG00000004166	fbxo18	99	40.809	ENSCCAG00000023218	FBH1	99	40.850	Cebus_capucinus
ENSGAFG00000004166	fbxo18	99	35.919	ENSCATG00000035430	FBH1	96	35.642	Cercocebus_atys
ENSGAFG00000004166	fbxo18	99	41.014	ENSCLAG00000008089	FBH1	99	41.106	Chinchilla_lanigera
ENSGAFG00000004166	fbxo18	85	43.668	ENSCSAG00000013644	FBH1	88	44.394	Chlorocebus_sabaeus
ENSGAFG00000004166	fbxo18	63	48.434	ENSCHOG00000007603	FBH1	59	48.434	Choloepus_hoffmanni
ENSGAFG00000004166	fbxo18	99	38.638	ENSCPBG00000019260	FBH1	100	37.947	Chrysemys_picta_bellii
ENSGAFG00000004166	fbxo18	99	40.884	ENSCANG00000023461	FBH1	99	40.884	Colobus_angolensis_palliatus
ENSGAFG00000004166	fbxo18	99	40.276	ENSCGRG00001018795	Fbh1	99	40.000	Cricetulus_griseus_chok1gshd
ENSGAFG00000004166	fbxo18	99	40.276	ENSCGRG00000008471	Fbh1	99	40.000	Cricetulus_griseus_crigri
ENSGAFG00000004166	fbxo18	72	62.903	ENSCSEG00000018212	fbxo18	81	64.062	Cynoglossus_semilaevis
ENSGAFG00000004166	fbxo18	86	78.241	ENSCVAG00000006828	fbxo18	99	78.016	Cyprinodon_variegatus
ENSGAFG00000004166	fbxo18	99	47.921	ENSDARG00000062983	fbxo18	100	47.119	Danio_rerio
ENSGAFG00000004166	fbxo18	99	40.608	ENSETEG00000019856	FBH1	99	40.331	Echinops_telfairi
ENSGAFG00000004166	fbxo18	99	40.938	ENSEASG00005019192	FBH1	99	40.938	Equus_asinus_asinus
ENSGAFG00000004166	fbxo18	99	40.938	ENSECAG00000006839	FBH1	99	40.938	Equus_caballus
ENSGAFG00000004166	fbxo18	76	44.475	ENSEEUG00000000461	FBH1	78	44.475	Erinaceus_europaeus
ENSGAFG00000004166	fbxo18	99	50.560	ENSELUG00000006556	fbxo18	100	50.904	Esox_lucius
ENSGAFG00000004166	fbxo18	99	41.063	ENSFCAG00000009004	FBH1	98	41.322	Felis_catus
ENSGAFG00000004166	fbxo18	99	41.035	ENSFDAG00000009830	FBH1	99	41.035	Fukomys_damarensis
ENSGAFG00000004166	fbxo18	100	80.744	ENSFHEG00000007533	fbxo18	100	80.558	Fundulus_heteroclitus
ENSGAFG00000004166	fbxo18	91	52.374	ENSGMOG00000010594	-	93	53.125	Gadus_morhua
ENSGAFG00000004166	fbxo18	97	38.491	ENSGALG00000008162	FBH1	82	41.657	Gallus_gallus
ENSGAFG00000004166	fbxo18	99	64.206	ENSGACG00000019171	fbxo18	100	63.738	Gasterosteus_aculeatus
ENSGAFG00000004166	fbxo18	99	40.536	ENSGAGG00000021773	FBH1	92	43.960	Gopherus_agassizii
ENSGAFG00000004166	fbxo18	99	40.771	ENSGGOG00000013326	FBXO18	99	40.588	Gorilla_gorilla
ENSGAFG00000004166	fbxo18	100	66.790	ENSHBUG00000016673	fbxo18	100	67.034	Haplochromis_burtoni
ENSGAFG00000004166	fbxo18	99	41.035	ENSHGLG00000015581	FBXO18	82	44.407	Heterocephalus_glaber_female
ENSGAFG00000004166	fbxo18	99	41.035	ENSHGLG00100009896	FBXO18	82	44.407	Heterocephalus_glaber_male
ENSGAFG00000004166	fbxo18	73	64.407	ENSHCOG00000010937	-	91	64.407	Hippocampus_comes
ENSGAFG00000004166	fbxo18	93	48.255	ENSIPUG00000019144	fbxo18	96	48.954	Ictalurus_punctatus
ENSGAFG00000004166	fbxo18	99	40.959	ENSSTOG00000006496	FBH1	99	40.628	Ictidomys_tridecemlineatus
ENSGAFG00000004166	fbxo18	99	71.735	ENSKMAG00000021437	fbxo18	96	71.549	Kryptolebias_marmoratus
ENSGAFG00000004166	fbxo18	99	67.102	ENSLBEG00000023717	fbxo18	100	66.915	Labrus_bergylta
ENSGAFG00000004166	fbxo18	80	34.412	ENSLACG00000013504	FBH1	100	34.850	Latimeria_chalumnae
ENSGAFG00000004166	fbxo18	99	44.841	ENSLOCG00000015655	fbxo18	100	44.267	Lepisosteus_oculatus
ENSGAFG00000004166	fbxo18	99	40.294	ENSLAFG00000013105	FBH1	82	44.231	Loxodonta_africana
ENSGAFG00000004166	fbxo18	99	40.884	ENSMMUG00000015143	FBH1	99	40.850	Macaca_mulatta
ENSGAFG00000004166	fbxo18	99	40.700	ENSMNEG00000043475	FBH1	99	40.665	Macaca_nemestrina
ENSGAFG00000004166	fbxo18	99	40.792	ENSMLEG00000035307	FBH1	99	40.775	Mandrillus_leucophaeus
ENSGAFG00000004166	fbxo18	99	64.325	ENSMAMG00000000527	fbxo18	100	64.781	Mastacembelus_armatus
ENSGAFG00000004166	fbxo18	100	66.422	ENSMZEG00005015202	fbxo18	100	67.064	Maylandia_zebra
ENSGAFG00000004166	fbxo18	93	40.081	ENSMGAG00000003231	FBH1	99	40.430	Meleagris_gallopavo
ENSGAFG00000004166	fbxo18	99	41.030	ENSMICG00000009646	FBH1	96	45.158	Microcebus_murinus
ENSGAFG00000004166	fbxo18	99	57.744	ENSMMOG00000010268	fbxo18	99	57.648	Mola_mola
ENSGAFG00000004166	fbxo18	83	43.307	ENSMODG00000018516	FBH1	89	43.311	Monodelphis_domestica
ENSGAFG00000004166	fbxo18	99	64.645	ENSMALG00000010440	fbxo18	99	64.550	Monopterus_albus
ENSGAFG00000004166	fbxo18	99	40.166	ENSMUSG00000058594	Fbh1	82	43.665	Mus_musculus
ENSGAFG00000004166	fbxo18	99	39.982	MGP_PahariEiJ_G0019237	Fbh1	99	40.296	Mus_pahari
ENSGAFG00000004166	fbxo18	99	40.734	ENSMPUG00000016343	FBH1	99	40.826	Mustela_putorius_furo
ENSGAFG00000004166	fbxo18	99	39.486	ENSMLUG00000000133	FBH1	99	39.486	Myotis_lucifugus
ENSGAFG00000004166	fbxo18	99	60.845	ENSNBRG00000018212	fbxo18	99	60.316	Neolamprologus_brichardi
ENSGAFG00000004166	fbxo18	99	40.771	ENSNLEG00000011537	FBH1	99	40.588	Nomascus_leucogenys
ENSGAFG00000004166	fbxo18	88	52.326	ENSOPRG00000002898	FBH1	93	42.909	Ochotona_princeps
ENSGAFG00000004166	fbxo18	99	41.052	ENSODEG00000004201	FBH1	99	41.111	Octodon_degus
ENSGAFG00000004166	fbxo18	100	66.697	ENSONIG00000011830	fbxo18	100	71.429	Oreochromis_niloticus
ENSGAFG00000004166	fbxo18	99	39.945	ENSOANG00000015459	FBH1	92	40.180	Ornithorhynchus_anatinus
ENSGAFG00000004166	fbxo18	99	40.955	ENSOCUG00000006237	FBH1	99	40.955	Oryctolagus_cuniculus
ENSGAFG00000004166	fbxo18	98	64.817	ENSORLG00000026493	fbxo18	99	64.817	Oryzias_latipes
ENSGAFG00000004166	fbxo18	98	64.346	ENSORLG00020004678	fbxo18	99	64.346	Oryzias_latipes_hni
ENSGAFG00000004166	fbxo18	98	63.936	ENSORLG00015001917	fbxo18	99	63.936	Oryzias_latipes_hsok
ENSGAFG00000004166	fbxo18	98	63.559	ENSOMEG00000011975	fbxo18	100	63.333	Oryzias_melastigma
ENSGAFG00000004166	fbxo18	99	41.144	ENSOGAG00000015682	FBH1	99	40.871	Otolemur_garnettii
ENSGAFG00000004166	fbxo18	99	40.184	ENSOARG00000012605	FBH1	82	44.005	Ovis_aries
ENSGAFG00000004166	fbxo18	99	40.863	ENSPPAG00000043946	FBH1	99	40.680	Pan_paniscus
ENSGAFG00000004166	fbxo18	99	41.080	ENSPPRG00000009687	FBH1	97	41.338	Panthera_pardus
ENSGAFG00000004166	fbxo18	99	40.951	ENSPTIG00000020396	FBH1	97	41.209	Panthera_tigris_altaica
ENSGAFG00000004166	fbxo18	99	40.771	ENSPTRG00000002261	FBH1	99	40.901	Pan_troglodytes
ENSGAFG00000004166	fbxo18	99	40.792	ENSPANG00000023427	FBH1	99	40.683	Papio_anubis
ENSGAFG00000004166	fbxo18	99	45.087	ENSPKIG00000025529	fbxo18	100	44.444	Paramormyrops_kingsleyae
ENSGAFG00000004166	fbxo18	99	39.799	ENSPSIG00000013802	FBH1	83	43.318	Pelodiscus_sinensis
ENSGAFG00000004166	fbxo18	99	39.759	ENSPEMG00000023309	Fbh1	82	43.665	Peromyscus_maniculatus_bairdii
ENSGAFG00000004166	fbxo18	99	39.721	ENSPCIG00000023460	FBH1	83	42.825	Phascolarctos_cinereus
ENSGAFG00000004166	fbxo18	100	92.999	ENSPFOG00000005889	fbxo18	100	93.094	Poecilia_formosa
ENSGAFG00000004166	fbxo18	100	93.283	ENSPLAG00000014934	fbxo18	100	93.188	Poecilia_latipinna
ENSGAFG00000004166	fbxo18	100	93.188	ENSPMEG00000021117	fbxo18	100	93.283	Poecilia_mexicana
ENSGAFG00000004166	fbxo18	74	87.109	ENSPREG00000017674	fbxo18	86	87.500	Poecilia_reticulata
ENSGAFG00000004166	fbxo18	99	41.627	ENSPPYG00000002064	FBH1	99	41.406	Pongo_abelii
ENSGAFG00000004166	fbxo18	99	36.624	ENSPCAG00000013584	FBH1	78	39.819	Procavia_capensis
ENSGAFG00000004166	fbxo18	99	39.760	ENSPCOG00000011617	FBH1	96	39.391	Propithecus_coquereli
ENSGAFG00000004166	fbxo18	99	40.556	ENSPVAG00000007082	FBH1	96	40.833	Pteropus_vampyrus
ENSGAFG00000004166	fbxo18	91	71.186	ENSPNYG00000015327	fbxo18	98	60.403	Pundamilia_nyererei
ENSGAFG00000004166	fbxo18	99	45.102	ENSPNAG00000008968	fbxo18	100	45.853	Pygocentrus_nattereri
ENSGAFG00000004166	fbxo18	78	37.910	ENSPNAG00000001339	-	92	37.789	Pygocentrus_nattereri
ENSGAFG00000004166	fbxo18	99	40.166	ENSRNOG00000018549	Fbh1	82	44.118	Rattus_norvegicus
ENSGAFG00000004166	fbxo18	99	40.700	ENSRBIG00000038238	FBH1	99	40.683	Rhinopithecus_bieti
ENSGAFG00000004166	fbxo18	99	40.792	ENSRROG00000029282	FBH1	97	40.775	Rhinopithecus_roxellana
ENSGAFG00000004166	fbxo18	99	40.424	ENSSBOG00000026129	FBH1	99	40.276	Saimiri_boliviensis_boliviensis
ENSGAFG00000004166	fbxo18	99	38.677	ENSSHAG00000009789	FBH1	83	42.356	Sarcophilus_harrisii
ENSGAFG00000004166	fbxo18	99	45.269	ENSSFOG00015023855	fbxo18	83	49.153	Scleropages_formosus
ENSGAFG00000004166	fbxo18	96	63.458	ENSSMAG00000012330	fbxo18	99	62.377	Scophthalmus_maximus
ENSGAFG00000004166	fbxo18	99	62.512	ENSSDUG00000014911	fbxo18	99	62.512	Seriola_dumerili
ENSGAFG00000004166	fbxo18	82	60.046	ENSSLDG00000014394	fbxo18	93	59.817	Seriola_lalandi_dorsalis
ENSGAFG00000004166	fbxo18	85	48.555	ENSSPUG00000001370	FBH1	82	45.000	Sphenodon_punctatus
ENSGAFG00000004166	fbxo18	98	66.761	ENSSPAG00000002282	fbxo18	99	66.761	Stegastes_partitus
ENSGAFG00000004166	fbxo18	99	41.155	ENSSSCG00000030030	FBH1	90	48.586	Sus_scrofa
ENSGAFG00000004166	fbxo18	80	58.121	ENSTNIG00000006893	fbxo18	99	58.178	Tetraodon_nigroviridis
ENSGAFG00000004166	fbxo18	90	42.034	ENSTBEG00000003595	FBH1	84	41.824	Tupaia_belangeri
ENSGAFG00000004166	fbxo18	99	39.405	ENSTTRG00000001338	FBH1	96	39.018	Tursiops_truncatus
ENSGAFG00000004166	fbxo18	99	41.414	ENSUAMG00000007277	FBH1	82	45.034	Ursus_americanus
ENSGAFG00000004166	fbxo18	83	44.855	ENSUMAG00000012189	FBH1	88	45.034	Ursus_maritimus
ENSGAFG00000004166	fbxo18	99	41.290	ENSVVUG00000006823	FBH1	89	44.647	Vulpes_vulpes
ENSGAFG00000004166	fbxo18	99	39.372	ENSXETG00000018125	fbh1	99	39.388	Xenopus_tropicalis
ENSGAFG00000004166	fbxo18	100	95.090	ENSXMAG00000019200	fbxo18	100	95.184	Xiphophorus_maculatus