EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000004173 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5517 bases
Position: chrNHOQ01001911.1:6722-12238
Accession: ZDB-GENE-070112-1352
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006126	R3H	PF01424.22	6.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006193	-	957	-	ENSGAFP00000006126	255 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004173	r3hdm4	100	54.647	ENSG00000198858	R3HDM4	100	54.647	Homo_sapiens
ENSGAFG00000004173	r3hdm4	92	57.983	ENSAMEG00000003001	R3HDM4	97	57.983	Ailuropoda_melanoleuca
ENSGAFG00000004173	r3hdm4	100	86.328	ENSACIG00000004672	r3hdm4	100	86.328	Amphilophus_citrinellus
ENSGAFG00000004173	r3hdm4	98	83.333	ENSATEG00000015913	r3hdm4	99	83.333	Anabas_testudineus
ENSGAFG00000004173	r3hdm4	92	57.563	ENSANAG00000029748	R3HDM4	98	57.563	Aotus_nancymaae
ENSGAFG00000004173	r3hdm4	93	57.028	ENSBTAG00000046406	R3HDM4	100	54.212	Bos_taurus
ENSGAFG00000004173	r3hdm4	93	56.855	ENSCJAG00000020114	R3HDM4	92	56.855	Callithrix_jacchus
ENSGAFG00000004173	r3hdm4	92	57.983	ENSCAFG00000019665	R3HDM4	87	57.983	Canis_familiaris
ENSGAFG00000004173	r3hdm4	92	58.403	ENSCAFG00020016880	R3HDM4	87	58.403	Canis_lupus_dingo
ENSGAFG00000004173	r3hdm4	100	53.846	ENSCHIG00000020110	R3HDM4	100	53.846	Capra_hircus
ENSGAFG00000004173	r3hdm4	92	57.143	ENSCCAG00000019955	R3HDM4	86	57.143	Cebus_capucinus
ENSGAFG00000004173	r3hdm4	100	54.613	ENSCATG00000037269	R3HDM4	100	54.613	Cercocebus_atys
ENSGAFG00000004173	r3hdm4	92	56.962	ENSCLAG00000007094	R3HDM4	97	56.962	Chinchilla_lanigera
ENSGAFG00000004173	r3hdm4	100	54.647	ENSCSAG00000012574	R3HDM4	100	54.647	Chlorocebus_sabaeus
ENSGAFG00000004173	r3hdm4	100	61.509	ENSCPBG00000009805	R3HDM4	100	61.509	Chrysemys_picta_bellii
ENSGAFG00000004173	r3hdm4	92	57.724	ENSCANG00000040439	R3HDM4	86	57.724	Colobus_angolensis_palliatus
ENSGAFG00000004173	r3hdm4	91	56.962	ENSCGRG00001021650	R3hdm4	89	56.962	Cricetulus_griseus_chok1gshd
ENSGAFG00000004173	r3hdm4	91	56.962	ENSCGRG00000013169	R3hdm4	89	56.962	Cricetulus_griseus_crigri
ENSGAFG00000004173	r3hdm4	100	74.902	ENSCSEG00000018211	r3hdm4	99	74.902	Cynoglossus_semilaevis
ENSGAFG00000004173	r3hdm4	100	91.373	ENSCVAG00000017127	r3hdm4	100	91.373	Cyprinodon_variegatus
ENSGAFG00000004173	r3hdm4	91	56.485	ENSDORG00000006605	R3hdm4	96	56.485	Dipodomys_ordii
ENSGAFG00000004173	r3hdm4	92	57.563	ENSEASG00005021556	R3HDM4	86	57.563	Equus_asinus_asinus
ENSGAFG00000004173	r3hdm4	92	57.563	ENSECAG00000000003	R3HDM4	87	57.563	Equus_caballus
ENSGAFG00000004173	r3hdm4	93	57.430	ENSFCAG00000042437	R3HDM4	92	57.430	Felis_catus
ENSGAFG00000004173	r3hdm4	90	64.655	ENSFALG00000013938	R3HDM4	96	64.655	Ficedula_albicollis
ENSGAFG00000004173	r3hdm4	92	56.723	ENSFDAG00000017040	R3HDM4	97	56.723	Fukomys_damarensis
ENSGAFG00000004173	r3hdm4	100	90.980	ENSFHEG00000017636	r3hdm4	100	90.980	Fundulus_heteroclitus
ENSGAFG00000004173	r3hdm4	95	70.661	ENSGMOG00000001231	r3hdm4	100	70.661	Gadus_morhua
ENSGAFG00000004173	r3hdm4	91	62.025	ENSGALG00000001998	R3HDM4	90	62.025	Gallus_gallus
ENSGAFG00000004173	r3hdm4	100	61.132	ENSGAGG00000019698	R3HDM4	100	61.132	Gopherus_agassizii
ENSGAFG00000004173	r3hdm4	92	57.983	ENSGGOG00000008040	R3HDM4	97	57.983	Gorilla_gorilla
ENSGAFG00000004173	r3hdm4	100	86.719	ENSHBUG00000014810	r3hdm4	100	86.719	Haplochromis_burtoni
ENSGAFG00000004173	r3hdm4	92	55.274	ENSHGLG00000016194	R3HDM4	88	55.274	Heterocephalus_glaber_female
ENSGAFG00000004173	r3hdm4	99	79.608	ENSHCOG00000008422	r3hdm4	99	79.608	Hippocampus_comes
ENSGAFG00000004173	r3hdm4	100	69.380	ENSIPUG00000006716	r3hdm4	100	69.380	Ictalurus_punctatus
ENSGAFG00000004173	r3hdm4	92	55.462	ENSSTOG00000023015	R3HDM4	97	55.462	Ictidomys_tridecemlineatus
ENSGAFG00000004173	r3hdm4	91	55.745	ENSJJAG00000012475	R3hdm4	89	55.745	Jaculus_jaculus
ENSGAFG00000004173	r3hdm4	100	86.719	ENSKMAG00000005853	r3hdm4	100	86.719	Kryptolebias_marmoratus
ENSGAFG00000004173	r3hdm4	100	84.766	ENSLBEG00000000730	r3hdm4	100	84.766	Labrus_bergylta
ENSGAFG00000004173	r3hdm4	100	62.977	ENSLACG00000016445	R3HDM4	100	62.977	Latimeria_chalumnae
ENSGAFG00000004173	r3hdm4	100	70.881	ENSLOCG00000002423	r3hdm4	100	71.264	Lepisosteus_oculatus
ENSGAFG00000004173	r3hdm4	91	57.203	ENSLAFG00000017796	R3HDM4	91	57.203	Loxodonta_africana
ENSGAFG00000004173	r3hdm4	100	55.019	ENSMFAG00000044131	R3HDM4	100	55.019	Macaca_fascicularis
ENSGAFG00000004173	r3hdm4	86	59.375	ENSMMUG00000009682	R3HDM4	90	59.375	Macaca_mulatta
ENSGAFG00000004173	r3hdm4	92	57.983	ENSMNEG00000044115	R3HDM4	96	57.983	Macaca_nemestrina
ENSGAFG00000004173	r3hdm4	93	57.202	ENSMLEG00000035693	R3HDM4	89	57.202	Mandrillus_leucophaeus
ENSGAFG00000004173	r3hdm4	87	82.511	ENSMAMG00000005652	r3hdm4	91	82.511	Mastacembelus_armatus
ENSGAFG00000004173	r3hdm4	89	57.082	ENSMAUG00000010611	R3hdm4	90	57.082	Mesocricetus_auratus
ENSGAFG00000004173	r3hdm4	100	53.506	ENSMICG00000010124	R3HDM4	100	53.506	Microcebus_murinus
ENSGAFG00000004173	r3hdm4	91	56.170	ENSMOCG00000002646	R3hdm4	89	56.356	Microtus_ochrogaster
ENSGAFG00000004173	r3hdm4	100	83.137	ENSMMOG00000008253	r3hdm4	100	83.137	Mola_mola
ENSGAFG00000004173	r3hdm4	89	60.435	ENSMODG00000005698	R3HDM4	99	60.435	Monodelphis_domestica
ENSGAFG00000004173	r3hdm4	100	82.031	ENSMALG00000018856	r3hdm4	100	82.031	Monopterus_albus
ENSGAFG00000004173	r3hdm4	99	52.852	MGP_CAROLIEiJ_G0015551	R3hdm4	99	53.232	Mus_caroli
ENSGAFG00000004173	r3hdm4	99	52.874	ENSMUSG00000035781	R3hdm4	99	53.257	Mus_musculus
ENSGAFG00000004173	r3hdm4	99	53.232	MGP_PahariEiJ_G0030964	R3hdm4	99	53.612	Mus_pahari
ENSGAFG00000004173	r3hdm4	99	53.612	MGP_SPRETEiJ_G0016369	-	84	53.992	Mus_spretus
ENSGAFG00000004173	r3hdm4	93	58.678	ENSMPUG00000009394	R3HDM4	90	58.678	Mustela_putorius_furo
ENSGAFG00000004173	r3hdm4	100	85.938	ENSNBRG00000004438	r3hdm4	100	85.938	Neolamprologus_brichardi
ENSGAFG00000004173	r3hdm4	87	54.348	ENSNLEG00000001022	R3HDM4	99	54.348	Nomascus_leucogenys
ENSGAFG00000004173	r3hdm4	92	58.824	ENSMEUG00000011020	R3HDM4	99	58.824	Notamacropus_eugenii
ENSGAFG00000004173	r3hdm4	92	56.962	ENSODEG00000011745	R3HDM4	88	56.962	Octodon_degus
ENSGAFG00000004173	r3hdm4	100	86.328	ENSONIG00000012675	r3hdm4	92	86.328	Oreochromis_niloticus
ENSGAFG00000004173	r3hdm4	100	82.422	ENSOMEG00000003005	r3hdm4	100	82.422	Oryzias_melastigma
ENSGAFG00000004173	r3hdm4	91	57.203	ENSOGAG00000025656	R3HDM4	89	57.203	Otolemur_garnettii
ENSGAFG00000004173	r3hdm4	92	57.563	ENSOARG00000009945	R3HDM4	97	57.563	Ovis_aries
ENSGAFG00000004173	r3hdm4	92	57.563	ENSPPAG00000042371	R3HDM4	97	57.563	Pan_paniscus
ENSGAFG00000004173	r3hdm4	100	55.019	ENSPANG00000015203	R3HDM4	100	55.019	Papio_anubis
ENSGAFG00000004173	r3hdm4	100	64.122	ENSPKIG00000007421	r3hdm4	100	65.649	Paramormyrops_kingsleyae
ENSGAFG00000004173	r3hdm4	100	73.930	ENSPMGG00000020467	r3hdm4	100	73.930	Periophthalmus_magnuspinnatus
ENSGAFG00000004173	r3hdm4	91	57.872	ENSPEMG00000008365	Tmem259	97	57.872	Peromyscus_maniculatus_bairdii
ENSGAFG00000004173	r3hdm4	100	94.510	ENSPFOG00000003199	r3hdm4	100	94.510	Poecilia_formosa
ENSGAFG00000004173	r3hdm4	100	94.118	ENSPMEG00000014183	r3hdm4	100	94.118	Poecilia_mexicana
ENSGAFG00000004173	r3hdm4	100	95.686	ENSPREG00000010709	r3hdm4	100	95.686	Poecilia_reticulata
ENSGAFG00000004173	r3hdm4	92	57.627	ENSPPYG00000009297	R3HDM4	88	57.627	Pongo_abelii
ENSGAFG00000004173	r3hdm4	58	60.265	ENSPCAG00000010997	R3HDM4	55	60.265	Procavia_capensis
ENSGAFG00000004173	r3hdm4	92	57.983	ENSPCOG00000016785	R3HDM4	88	57.983	Propithecus_coquereli
ENSGAFG00000004173	r3hdm4	100	86.719	ENSPNYG00000017489	r3hdm4	100	86.719	Pundamilia_nyererei
ENSGAFG00000004173	r3hdm4	99	52.830	ENSRNOG00000011489	R3hdm4	99	53.030	Rattus_norvegicus
ENSGAFG00000004173	r3hdm4	92	57.983	ENSRROG00000028842	R3HDM4	88	57.983	Rhinopithecus_roxellana
ENSGAFG00000004173	r3hdm4	92	56.612	ENSSBOG00000019298	R3HDM4	73	56.627	Saimiri_boliviensis_boliviensis
ENSGAFG00000004173	r3hdm4	56	60.959	ENSSHAG00000003036	-	100	60.959	Sarcophilus_harrisii
ENSGAFG00000004173	r3hdm4	97	70.565	ENSSFOG00015020574	r3hdm4	91	70.281	Scleropages_formosus
ENSGAFG00000004173	r3hdm4	100	83.203	ENSSMAG00000021090	r3hdm4	74	83.203	Scophthalmus_maximus
ENSGAFG00000004173	r3hdm4	100	85.547	ENSSDUG00000008488	r3hdm4	100	85.547	Seriola_dumerili
ENSGAFG00000004173	r3hdm4	100	85.156	ENSSLDG00000025328	r3hdm4	100	85.156	Seriola_lalandi_dorsalis
ENSGAFG00000004173	r3hdm4	93	62.917	ENSSPUG00000005434	R3HDM4	93	62.917	Sphenodon_punctatus
ENSGAFG00000004173	r3hdm4	99	81.641	ENSSPAG00000002562	r3hdm4	99	81.641	Stegastes_partitus
ENSGAFG00000004173	r3hdm4	92	58.824	ENSSSCG00000013419	R3HDM4	91	57.028	Sus_scrofa
ENSGAFG00000004173	r3hdm4	77	56.436	ENSTGUG00000000663	R3HDM4	97	56.931	Taeniopygia_guttata
ENSGAFG00000004173	r3hdm4	92	58.475	ENSTTRG00000001470	R3HDM4	97	58.475	Tursiops_truncatus
ENSGAFG00000004173	r3hdm4	93	52.227	ENSUAMG00000005751	R3HDM4	100	58.929	Ursus_americanus
ENSGAFG00000004173	r3hdm4	93	57.028	ENSVVUG00000022685	R3HDM4	91	57.028	Vulpes_vulpes
ENSGAFG00000004173	r3hdm4	97	48.387	ENSXETG00000033624	R3HDM4	96	48.387	Xenopus_tropicalis
ENSGAFG00000004173	r3hdm4	100	95.703	ENSXCOG00000005127	r3hdm4	100	95.703	Xiphophorus_couchianus
ENSGAFG00000004173	r3hdm4	100	96.078	ENSXMAG00000022875	r3hdm4	100	96.078	Xiphophorus_maculatus