EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000004198 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4194 bases
Position: chrNHOQ01001767.1:157207-161400
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006170	RtcB	PF01139.17	5.4e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006238	-	1863	-	ENSGAFP00000006170	505 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004198	rtcb	100	94.851	ENSG00000100220	RTCB	100	94.851	Homo_sapiens
ENSGAFG00000004198	rtcb	100	97.426	ENSAPOG00000006040	rtcb	100	97.426	Acanthochromis_polyacanthus
ENSGAFG00000004198	rtcb	100	94.851	ENSAMEG00000016152	RTCB	100	94.851	Ailuropoda_melanoleuca
ENSGAFG00000004198	rtcb	100	92.475	ENSACIG00000009083	rtcb	100	92.475	Amphilophus_citrinellus
ENSGAFG00000004198	rtcb	100	97.426	ENSAOCG00000005662	rtcb	100	98.478	Amphiprion_ocellaris
ENSGAFG00000004198	rtcb	100	97.426	ENSAPEG00000024701	rtcb	100	97.426	Amphiprion_percula
ENSGAFG00000004198	rtcb	96	92.813	ENSAPEG00000024653	rtcb	100	92.813	Amphiprion_percula
ENSGAFG00000004198	rtcb	100	97.030	ENSATEG00000000618	rtcb	100	97.030	Anabas_testudineus
ENSGAFG00000004198	rtcb	100	91.522	ENSACAG00000014817	RTCB	100	91.522	Anolis_carolinensis
ENSGAFG00000004198	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSGAFG00000004198	rtcb	100	80.198	ENSANAG00000018191	-	91	80.198	Aotus_nancymaae
ENSGAFG00000004198	rtcb	100	96.238	ENSACLG00000008367	rtcb	100	96.739	Astatotilapia_calliptera
ENSGAFG00000004198	rtcb	100	95.050	ENSAMXG00000042320	rtcb	100	95.050	Astyanax_mexicanus
ENSGAFG00000004198	rtcb	100	95.050	ENSBTAG00000011070	RTCB	100	95.050	Bos_taurus
ENSGAFG00000004198	rtcb	100	74.455	WBGene00008877	rtcb-1	100	74.455	Caenorhabditis_elegans
ENSGAFG00000004198	rtcb	100	94.653	ENSCJAG00000006128	RTCB	100	94.653	Callithrix_jacchus
ENSGAFG00000004198	rtcb	100	90.693	ENSCAFG00000010789	-	100	90.693	Canis_familiaris
ENSGAFG00000004198	rtcb	100	94.851	ENSCAFG00000001785	RTCB	100	94.851	Canis_familiaris
ENSGAFG00000004198	rtcb	100	94.851	ENSCAFG00020004890	-	100	94.851	Canis_lupus_dingo
ENSGAFG00000004198	rtcb	87	90.682	ENSCAFG00020018953	-	99	90.682	Canis_lupus_dingo
ENSGAFG00000004198	rtcb	100	95.050	ENSCHIG00000027009	-	100	95.050	Capra_hircus
ENSGAFG00000004198	rtcb	100	94.455	ENSTSYG00000012320	RTCB	100	94.455	Carlito_syrichta
ENSGAFG00000004198	rtcb	94	94.759	ENSCAPG00000011647	RTCB	96	94.759	Cavia_aperea
ENSGAFG00000004198	rtcb	100	94.653	ENSCCAG00000000618	RTCB	100	94.653	Cebus_capucinus
ENSGAFG00000004198	rtcb	100	94.653	ENSCATG00000033424	RTCB	100	94.653	Cercocebus_atys
ENSGAFG00000004198	rtcb	100	94.851	ENSCLAG00000007997	RTCB	100	94.851	Chinchilla_lanigera
ENSGAFG00000004198	rtcb	100	94.455	ENSCSAG00000008351	RTCB	100	94.455	Chlorocebus_sabaeus
ENSGAFG00000004198	rtcb	100	80.990	ENSCHOG00000009123	RTCB	100	80.990	Choloepus_hoffmanni
ENSGAFG00000004198	rtcb	100	93.465	ENSCPBG00000023184	RTCB	100	93.465	Chrysemys_picta_bellii
ENSGAFG00000004198	rtcb	100	82.772	ENSCING00000003830	-	100	82.772	Ciona_intestinalis
ENSGAFG00000004198	rtcb	100	82.970	ENSCSAVG00000008124	-	100	82.005	Ciona_savignyi
ENSGAFG00000004198	rtcb	100	90.891	ENSCANG00000001891	RTCB	100	90.891	Colobus_angolensis_palliatus
ENSGAFG00000004198	rtcb	100	94.455	ENSCGRG00001011173	Rtcb	100	94.455	Cricetulus_griseus_chok1gshd
ENSGAFG00000004198	rtcb	99	90.060	ENSCGRG00000009587	-	99	90.060	Cricetulus_griseus_crigri
ENSGAFG00000004198	rtcb	100	95.842	ENSCSEG00000003986	rtcb	100	95.842	Cynoglossus_semilaevis
ENSGAFG00000004198	rtcb	82	97.356	ENSCVAG00000000569	rtcb	95	97.356	Cyprinodon_variegatus
ENSGAFG00000004198	rtcb	100	95.644	ENSDARG00000101047	rtcb	100	95.644	Danio_rerio
ENSGAFG00000004198	rtcb	80	90.909	ENSDNOG00000012425	RTCB	99	90.909	Dasypus_novemcinctus
ENSGAFG00000004198	rtcb	100	94.059	ENSDORG00000010855	Rtcb	100	94.059	Dipodomys_ordii
ENSGAFG00000004198	rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSGAFG00000004198	rtcb	100	88.713	ENSETEG00000001988	RTCB	100	88.713	Echinops_telfairi
ENSGAFG00000004198	rtcb	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSGAFG00000004198	rtcb	100	94.653	ENSEASG00005019059	RTCB	100	94.653	Equus_asinus_asinus
ENSGAFG00000004198	rtcb	100	94.653	ENSECAG00000023998	RTCB	100	94.653	Equus_caballus
ENSGAFG00000004198	rtcb	89	86.130	ENSEEUG00000006251	RTCB	100	86.130	Erinaceus_europaeus
ENSGAFG00000004198	rtcb	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSGAFG00000004198	rtcb	100	94.851	ENSFCAG00000026480	RTCB	100	94.851	Felis_catus
ENSGAFG00000004198	rtcb	100	94.257	ENSFALG00000013334	RTCB	100	94.257	Ficedula_albicollis
ENSGAFG00000004198	rtcb	100	94.653	ENSFDAG00000018150	RTCB	100	94.653	Fukomys_damarensis
ENSGAFG00000004198	rtcb	100	98.020	ENSFHEG00000009595	rtcb	100	98.020	Fundulus_heteroclitus
ENSGAFG00000004198	rtcb	100	92.277	ENSGMOG00000018882	rtcb	100	92.277	Gadus_morhua
ENSGAFG00000004198	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSGAFG00000004198	rtcb	100	95.446	ENSGACG00000000586	rtcb	100	95.446	Gasterosteus_aculeatus
ENSGAFG00000004198	rtcb	93	92.979	ENSGAGG00000019133	RTCB	98	92.979	Gopherus_agassizii
ENSGAFG00000004198	rtcb	100	94.851	ENSGGOG00000011402	RTCB	100	94.851	Gorilla_gorilla
ENSGAFG00000004198	rtcb	100	96.238	ENSHBUG00000020571	rtcb	100	96.238	Haplochromis_burtoni
ENSGAFG00000004198	rtcb	100	94.653	ENSHGLG00000004492	RTCB	100	94.653	Heterocephalus_glaber_female
ENSGAFG00000004198	rtcb	93	67.797	ENSHGLG00000001066	-	99	67.797	Heterocephalus_glaber_female
ENSGAFG00000004198	rtcb	100	94.653	ENSHGLG00100008965	RTCB	100	94.653	Heterocephalus_glaber_male
ENSGAFG00000004198	rtcb	100	93.491	ENSHCOG00000006450	rtcb	100	93.491	Hippocampus_comes
ENSGAFG00000004198	rtcb	100	94.851	ENSIPUG00000015443	rtcb	100	94.851	Ictalurus_punctatus
ENSGAFG00000004198	rtcb	100	94.653	ENSSTOG00000003878	RTCB	100	94.653	Ictidomys_tridecemlineatus
ENSGAFG00000004198	rtcb	100	94.455	ENSJJAG00000010667	Rtcb	100	94.455	Jaculus_jaculus
ENSGAFG00000004198	rtcb	100	97.228	ENSKMAG00000013178	rtcb	100	97.228	Kryptolebias_marmoratus
ENSGAFG00000004198	rtcb	100	95.248	ENSLBEG00000000214	rtcb	100	95.248	Labrus_bergylta
ENSGAFG00000004198	rtcb	100	96.436	ENSLBEG00000010566	RTCB	100	96.436	Labrus_bergylta
ENSGAFG00000004198	rtcb	100	94.257	ENSLACG00000013033	RTCB	100	94.257	Latimeria_chalumnae
ENSGAFG00000004198	rtcb	100	95.050	ENSLOCG00000016515	rtcb	99	95.050	Lepisosteus_oculatus
ENSGAFG00000004198	rtcb	100	94.059	ENSLAFG00000002082	RTCB	100	94.059	Loxodonta_africana
ENSGAFG00000004198	rtcb	100	94.455	ENSMFAG00000034419	RTCB	100	94.455	Macaca_fascicularis
ENSGAFG00000004198	rtcb	100	94.455	ENSMMUG00000006720	RTCB	100	94.455	Macaca_mulatta
ENSGAFG00000004198	rtcb	100	94.455	ENSMNEG00000040669	RTCB	100	94.455	Macaca_nemestrina
ENSGAFG00000004198	rtcb	100	94.653	ENSMLEG00000040505	RTCB	100	94.653	Mandrillus_leucophaeus
ENSGAFG00000004198	rtcb	100	97.030	ENSMAMG00000020676	rtcb	100	97.030	Mastacembelus_armatus
ENSGAFG00000004198	rtcb	100	96.238	ENSMZEG00005018942	rtcb	100	96.238	Maylandia_zebra
ENSGAFG00000004198	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSGAFG00000004198	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSGAFG00000004198	rtcb	100	94.653	ENSMICG00000013303	-	100	94.653	Microcebus_murinus
ENSGAFG00000004198	rtcb	100	75.446	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSGAFG00000004198	rtcb	100	94.455	ENSMOCG00000002440	Rtcb	100	94.455	Microtus_ochrogaster
ENSGAFG00000004198	rtcb	100	96.436	ENSMMOG00000005987	rtcb	100	96.436	Mola_mola
ENSGAFG00000004198	rtcb	100	94.257	ENSMODG00000001414	RTCB	100	94.257	Monodelphis_domestica
ENSGAFG00000004198	rtcb	100	96.832	ENSMALG00000007603	rtcb	100	96.832	Monopterus_albus
ENSGAFG00000004198	rtcb	100	94.455	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.455	Mus_caroli
ENSGAFG00000004198	rtcb	100	94.455	ENSMUSG00000001783	Rtcb	100	94.455	Mus_musculus
ENSGAFG00000004198	rtcb	100	94.455	MGP_PahariEiJ_G0031396	Rtcb	100	94.455	Mus_pahari
ENSGAFG00000004198	rtcb	100	94.455	MGP_SPRETEiJ_G0016507	Rtcb	100	94.455	Mus_spretus
ENSGAFG00000004198	rtcb	100	94.851	ENSMPUG00000012285	RTCB	100	94.851	Mustela_putorius_furo
ENSGAFG00000004198	rtcb	100	91.913	ENSMLUG00000007803	RTCB	100	91.913	Myotis_lucifugus
ENSGAFG00000004198	rtcb	77	88.966	ENSNGAG00000005093	Rtcb	100	88.966	Nannospalax_galili
ENSGAFG00000004198	rtcb	100	96.238	ENSNBRG00000017202	rtcb	100	96.238	Neolamprologus_brichardi
ENSGAFG00000004198	rtcb	100	94.851	ENSNLEG00000004960	RTCB	100	94.851	Nomascus_leucogenys
ENSGAFG00000004198	rtcb	88	99.107	ENSMEUG00000007809	-	88	99.107	Notamacropus_eugenii
ENSGAFG00000004198	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSGAFG00000004198	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSGAFG00000004198	rtcb	100	62.970	ENSODEG00000005042	-	100	62.970	Octodon_degus
ENSGAFG00000004198	rtcb	100	96.832	ENSONIG00000007474	rtcb	100	96.832	Oreochromis_niloticus
ENSGAFG00000004198	rtcb	100	93.861	ENSOANG00000005524	RTCB	100	93.861	Ornithorhynchus_anatinus
ENSGAFG00000004198	rtcb	93	94.468	ENSOCUG00000008270	RTCB	96	94.468	Oryctolagus_cuniculus
ENSGAFG00000004198	rtcb	100	96.832	ENSORLG00000020093	rtcb	100	96.832	Oryzias_latipes
ENSGAFG00000004198	rtcb	100	96.832	ENSORLG00020003706	rtcb	100	96.832	Oryzias_latipes_hni
ENSGAFG00000004198	rtcb	100	97.030	ENSORLG00015002968	rtcb	100	97.030	Oryzias_latipes_hsok
ENSGAFG00000004198	rtcb	100	96.436	ENSOMEG00000021278	rtcb	100	96.436	Oryzias_melastigma
ENSGAFG00000004198	rtcb	100	94.059	ENSOGAG00000001425	RTCB	100	94.059	Otolemur_garnettii
ENSGAFG00000004198	rtcb	100	95.050	ENSOARG00000018008	RTCB	100	95.050	Ovis_aries
ENSGAFG00000004198	rtcb	100	94.851	ENSPPAG00000028667	RTCB	100	94.851	Pan_paniscus
ENSGAFG00000004198	rtcb	100	94.851	ENSPPRG00000004038	RTCB	100	94.851	Panthera_pardus
ENSGAFG00000004198	rtcb	94	90.947	ENSPTIG00000020499	RTCB	97	92.000	Panthera_tigris_altaica
ENSGAFG00000004198	rtcb	100	94.851	ENSPTRG00000014287	RTCB	100	94.851	Pan_troglodytes
ENSGAFG00000004198	rtcb	100	94.455	ENSPANG00000016035	RTCB	100	94.455	Papio_anubis
ENSGAFG00000004198	rtcb	100	94.257	ENSPKIG00000001881	rtcb	100	94.257	Paramormyrops_kingsleyae
ENSGAFG00000004198	rtcb	91	94.565	ENSPSIG00000011690	RTCB	100	94.565	Pelodiscus_sinensis
ENSGAFG00000004198	rtcb	100	96.634	ENSPMGG00000016672	rtcb	100	96.634	Periophthalmus_magnuspinnatus
ENSGAFG00000004198	rtcb	100	94.455	ENSPEMG00000019548	Rtcb	100	94.455	Peromyscus_maniculatus_bairdii
ENSGAFG00000004198	rtcb	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSGAFG00000004198	rtcb	100	94.257	ENSPCIG00000009467	RTCB	100	94.257	Phascolarctos_cinereus
ENSGAFG00000004198	rtcb	100	99.604	ENSPFOG00000003058	rtcb	100	99.604	Poecilia_formosa
ENSGAFG00000004198	rtcb	100	99.406	ENSPLAG00000017663	rtcb	100	99.406	Poecilia_latipinna
ENSGAFG00000004198	rtcb	100	99.604	ENSPMEG00000006227	rtcb	100	99.604	Poecilia_mexicana
ENSGAFG00000004198	rtcb	100	99.010	ENSPREG00000018467	rtcb	100	99.010	Poecilia_reticulata
ENSGAFG00000004198	rtcb	100	94.851	ENSPPYG00000011752	RTCB	100	94.851	Pongo_abelii
ENSGAFG00000004198	rtcb	93	77.754	ENSPCAG00000013641	RTCB	100	77.754	Procavia_capensis
ENSGAFG00000004198	rtcb	100	94.653	ENSPCOG00000017243	RTCB	100	94.653	Propithecus_coquereli
ENSGAFG00000004198	rtcb	93	93.617	ENSPVAG00000002380	RTCB	100	93.617	Pteropus_vampyrus
ENSGAFG00000004198	rtcb	100	96.238	ENSPNYG00000022760	rtcb	100	96.238	Pundamilia_nyererei
ENSGAFG00000004198	rtcb	100	95.644	ENSPNAG00000009209	rtcb	100	95.644	Pygocentrus_nattereri
ENSGAFG00000004198	rtcb	100	94.455	ENSRNOG00000004813	Rtcb	100	94.455	Rattus_norvegicus
ENSGAFG00000004198	rtcb	100	86.561	ENSRBIG00000042090	RTCB	100	86.561	Rhinopithecus_bieti
ENSGAFG00000004198	rtcb	100	90.099	ENSSBOG00000020085	-	100	90.099	Saimiri_boliviensis_boliviensis
ENSGAFG00000004198	rtcb	94	95.570	ENSSHAG00000016277	RTCB	100	95.570	Sarcophilus_harrisii
ENSGAFG00000004198	rtcb	100	93.465	ENSSFOG00015011572	RTCB	100	93.465	Scleropages_formosus
ENSGAFG00000004198	rtcb	100	94.851	ENSSFOG00015000763	rtcb	100	94.851	Scleropages_formosus
ENSGAFG00000004198	rtcb	100	93.267	ENSSMAG00000005096	rtcb	100	93.267	Scophthalmus_maximus
ENSGAFG00000004198	rtcb	100	95.842	ENSSDUG00000012605	rtcb	100	95.842	Seriola_dumerili
ENSGAFG00000004198	rtcb	100	95.842	ENSSLDG00000019458	rtcb	100	95.842	Seriola_lalandi_dorsalis
ENSGAFG00000004198	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSGAFG00000004198	rtcb	100	93.465	ENSSPUG00000012814	RTCB	100	93.465	Sphenodon_punctatus
ENSGAFG00000004198	rtcb	100	97.426	ENSSPAG00000004623	rtcb	100	97.426	Stegastes_partitus
ENSGAFG00000004198	rtcb	100	94.851	ENSSSCG00000000158	RTCB	100	94.851	Sus_scrofa
ENSGAFG00000004198	rtcb	100	94.257	ENSTGUG00000010947	RTCB	99	94.257	Taeniopygia_guttata
ENSGAFG00000004198	rtcb	91	97.174	ENSTRUG00000009880	rtcb	100	97.174	Takifugu_rubripes
ENSGAFG00000004198	rtcb	100	94.653	ENSTNIG00000002484	rtcb	100	94.653	Tetraodon_nigroviridis
ENSGAFG00000004198	rtcb	100	81.782	ENSTBEG00000004418	RTCB	100	81.782	Tupaia_belangeri
ENSGAFG00000004198	rtcb	93	94.043	ENSTTRG00000006417	RTCB	100	94.043	Tursiops_truncatus
ENSGAFG00000004198	rtcb	100	94.851	ENSUAMG00000022792	RTCB	100	94.851	Ursus_americanus
ENSGAFG00000004198	rtcb	100	94.851	ENSUMAG00000017225	RTCB	100	94.851	Ursus_maritimus
ENSGAFG00000004198	rtcb	100	94.653	ENSVPAG00000005375	RTCB	100	94.653	Vicugna_pacos
ENSGAFG00000004198	rtcb	100	94.851	ENSVVUG00000023408	RTCB	100	95.332	Vulpes_vulpes
ENSGAFG00000004198	rtcb	100	93.069	ENSXETG00000011523	rtcb	100	93.069	Xenopus_tropicalis
ENSGAFG00000004198	rtcb	100	99.208	ENSXMAG00000002855	rtcb	100	99.208	Xiphophorus_maculatus