EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004319 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5949 bases
Position: chrNHOQ01002297.1:2774-8722
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006332	zf-C2H2	PF00096.26	4.8e-17	1	3
ENSGAFP00000006332	zf-C2H2	PF00096.26	4.8e-17	2	3
ENSGAFP00000006332	zf-C2H2	PF00096.26	4.8e-17	3	3
ENSGAFP00000006332	zf-met	PF12874.7	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006400	-	4927	-	ENSGAFP00000006332	379 (aa)	-	UPI000DD26E10

Gene Model

Click here to download ENSGAFG00000004319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004319	-	53	38.168	ENSGAFG00000012934	-	77	38.346
ENSGAFG00000004319	-	56	45.038	ENSGAFG00000018820	-	92	45.038
ENSGAFG00000004319	-	57	44.776	ENSGAFG00000016347	znf668	91	44.776
ENSGAFG00000004319	-	59	40.000	ENSGAFG00000014188	-	99	40.000
ENSGAFG00000004319	-	98	43.939	ENSGAFG00000019035	-	96	43.939
ENSGAFG00000004319	-	63	40.000	ENSGAFG00000013452	-	96	40.000
ENSGAFG00000004319	-	65	40.244	ENSGAFG00000013066	-	72	40.244
ENSGAFG00000004319	-	52	40.000	ENSGAFG00000007110	-	78	40.000
ENSGAFG00000004319	-	84	43.182	ENSGAFG00000011999	-	95	40.909
ENSGAFG00000004319	-	98	36.111	ENSGAFG00000011998	-	96	36.111
ENSGAFG00000004319	-	54	44.275	ENSGAFG00000007098	-	99	44.275
ENSGAFG00000004319	-	95	44.340	ENSGAFG00000018422	-	93	44.340
ENSGAFG00000004319	-	100	38.571	ENSGAFG00000020501	-	99	40.458
ENSGAFG00000004319	-	98	42.991	ENSGAFG00000020507	-	98	42.991
ENSGAFG00000004319	-	57	44.275	ENSGAFG00000012069	-	99	44.275
ENSGAFG00000004319	-	97	44.961	ENSGAFG00000003150	-	92	44.961
ENSGAFG00000004319	-	57	41.284	ENSGAFG00000018557	-	52	41.284
ENSGAFG00000004319	-	81	41.538	ENSGAFG00000010983	-	88	41.538
ENSGAFG00000004319	-	67	39.007	ENSGAFG00000008274	-	97	39.007
ENSGAFG00000004319	-	98	37.079	ENSGAFG00000000549	-	98	37.079
ENSGAFG00000004319	-	55	44.643	ENSGAFG00000011884	-	99	43.511
ENSGAFG00000004319	-	56	47.222	ENSGAFG00000011965	-	86	47.222
ENSGAFG00000004319	-	55	40.310	ENSGAFG00000014419	-	73	40.310
ENSGAFG00000004319	-	63	41.667	ENSGAFG00000013055	-	85	41.667
ENSGAFG00000004319	-	55	45.833	ENSGAFG00000013677	-	90	45.833
ENSGAFG00000004319	-	98	41.221	ENSGAFG00000008231	-	98	41.221
ENSGAFG00000004319	-	51	42.453	ENSGAFG00000013969	-	94	46.667
ENSGAFG00000004319	-	56	38.931	ENSGAFG00000014097	-	84	38.931
ENSGAFG00000004319	-	57	45.536	ENSGAFG00000013491	-	83	45.536
ENSGAFG00000004319	-	56	41.250	ENSGAFG00000000521	-	81	41.250
ENSGAFG00000004319	-	52	40.458	ENSGAFG00000012733	-	71	40.458
ENSGAFG00000004319	-	56	40.299	ENSGAFG00000011906	-	75	40.299
ENSGAFG00000004319	-	73	38.760	ENSGAFG00000018302	-	97	38.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004319	-	100	63.065	ENSAOCG00000021436	-	100	63.065	Amphiprion_ocellaris
ENSGAFG00000004319	-	100	63.317	ENSAPEG00000007175	-	100	63.317	Amphiprion_percula
ENSGAFG00000004319	-	56	38.462	ENSXETG00000030249	-	68	42.748	Xenopus_tropicalis