EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000004334 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Minus strand
Length
5802 bases
Position
chrNHOQ01000153.1:51926-57727
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000006497RRM_1PF00076.221.1e-4212
ENSGAFP00000006497RRM_1PF00076.221.1e-4222
ENSGAFP00000006524RRM_1PF00076.221.1e-4212
ENSGAFP00000006524RRM_1PF00076.221.1e-4222
ENSGAFP00000006515RRM_1PF00076.221.4e-4212
ENSGAFP00000006515RRM_1PF00076.221.4e-4222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000006595-1425-ENSGAFP00000006524474 (aa)--
ENSGAFT00000006568-1404-ENSGAFP00000006497467 (aa)--
ENSGAFT00000006586-1476-ENSGAFP00000006515491 (aa)--
Gene Model
Click here to download ENSGAFG00000004334's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004334's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000004334-5837.255ENSGAFG00000005628-6539.175
ENSGAFG00000004334-6335.294ENSGAFG00000013626u2af2a5937.255
ENSGAFG00000004334-8441.463ENSGAFG00000021058rbm39b6438.614
ENSGAFG00000004334-9980.903ENSGAFG00000021040puf60b10080.583
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000004334-9978.842ENSG00000179950PUF6010079.441Homo_sapiens
ENSGAFG00000004334-9981.314ENSAPOG00000001713puf60b9880.971Acanthochromis_polyacanthus
ENSGAFG00000004334-9976.789ENSAMEG00000006406PUF609277.563Ailuropoda_melanoleuca
ENSGAFG00000004334-9981.109ENSACIG00000021705puf60b10080.583Amphilophus_citrinellus
ENSGAFG00000004334-10080.825ENSACIG00000003263-10081.649Amphilophus_citrinellus
ENSGAFG00000004334-9981.314ENSAOCG00000005395puf60b10080.971Amphiprion_ocellaris
ENSGAFG00000004334-10087.671ENSAOCG00000015558-9887.867Amphiprion_ocellaris
ENSGAFG00000004334-9978.715ENSAPEG00000011923puf60b9778.916Amphiprion_percula
ENSGAFG00000004334-10082.413ENSAPEG00000001836-10083.570Amphiprion_percula
ENSGAFG00000004334-10087.647ENSATEG00000006303-9887.647Anabas_testudineus
ENSGAFG00000004334-9981.520ENSATEG00000001730puf60b9880.971Anabas_testudineus
ENSGAFG00000004334-9979.184ENSAPLG00000010150PUF609979.344Anas_platyrhynchos
ENSGAFG00000004334-9978.499ENSACAG00000001645PUF609678.503Anolis_carolinensis
ENSGAFG00000004334-9979.042ENSANAG00000018626PUF6010079.537Aotus_nancymaae
ENSGAFG00000004334-9981.109ENSACLG00000004462puf60b10080.723Astatotilapia_calliptera
ENSGAFG00000004334-9976.923ENSAMXG00000041030puf60b10077.030Astyanax_mexicanus
ENSGAFG00000004334-9981.600ENSAMXG00000036570puf60a9783.000Astyanax_mexicanus
ENSGAFG00000004334-9979.042ENSBTAG00000037493PUF609879.537Bos_taurus
ENSGAFG00000004334-8053.676WBGene00004389rnp-68751.678Caenorhabditis_elegans
ENSGAFG00000004334-9978.842ENSCJAG00000021485PUF609779.344Callithrix_jacchus
ENSGAFG00000004334-9979.042ENSCAFG00000001400PUF609279.641Canis_familiaris
ENSGAFG00000004334-9979.042ENSCAFG00020018754PUF609779.537Canis_lupus_dingo
ENSGAFG00000004334-9978.776ENSCHIG00000001618PUF608679.537Capra_hircus
ENSGAFG00000004334-9978.958ENSTSYG00000011912PUF6010079.537Carlito_syrichta
ENSGAFG00000004334-9974.138ENSCPOG00000014613PUF609374.904Cavia_porcellus
ENSGAFG00000004334-9978.980ENSCCAG00000007744PUF609779.344Cebus_capucinus
ENSGAFG00000004334-9978.842ENSCATG00000035405PUF609779.344Cercocebus_atys
ENSGAFG00000004334-9979.042ENSCLAG00000009154PUF609179.641Chinchilla_lanigera
ENSGAFG00000004334-9978.764ENSCSAG00000008878PUF6010079.344Chlorocebus_sabaeus
ENSGAFG00000004334-9979.184ENSCPBG00000005595PUF609779.151Chrysemys_picta_bellii
ENSGAFG00000004334-6461.321ENSCING00000002156-8761.635Ciona_intestinalis
ENSGAFG00000004334-9948.049ENSCING00000008436-9549.799Ciona_intestinalis
ENSGAFG00000004334-9951.690ENSCSAVG00000001385-9952.663Ciona_savignyi
ENSGAFG00000004334-9947.890ENSCSAVG00000004765-9850.104Ciona_savignyi
ENSGAFG00000004334-8179.000ENSCANG00000041843PUF609979.856Colobus_angolensis_palliatus
ENSGAFG00000004334-9978.842ENSCGRG00001017442Puf609179.441Cricetulus_griseus_chok1gshd
ENSGAFG00000004334-9978.776ENSCGRG00000003717Puf609279.344Cricetulus_griseus_crigri
ENSGAFG00000004334-10080.242ENSCSEG00000014845-8981.653Cynoglossus_semilaevis
ENSGAFG00000004334-9980.982ENSCSEG00000019887puf60b9180.583Cynoglossus_semilaevis
ENSGAFG00000004334-9588.069ENSCVAG00000001560-9888.720Cyprinodon_variegatus
ENSGAFG00000004334-9980.082ENSCVAG00000009386puf60b10079.920Cyprinodon_variegatus
ENSGAFG00000004334-10076.634ENSDARG00000001241puf60b10088.492Danio_rerio
ENSGAFG00000004334-10080.688ENSDARG00000032175puf60a10089.076Danio_rerio
ENSGAFG00000004334-9865.166ENSDNOG00000043278PUF609065.949Dasypus_novemcinctus
ENSGAFG00000004334-9978.842ENSDORG00000004585Puf609479.344Dipodomys_ordii
ENSGAFG00000004334-9461.311FBgn0028577hfp8161.513Drosophila_melanogaster
ENSGAFG00000004334-9960.638ENSEBUG00000014291puf60b8462.478Eptatretus_burgeri
ENSGAFG00000004334-9769.328ENSEBUG00000005470-8869.328Eptatretus_burgeri
ENSGAFG00000004334-9979.042ENSEASG00005009695PUF609779.537Equus_asinus_asinus
ENSGAFG00000004334-9979.042ENSECAG00000024681PUF609679.537Equus_caballus
ENSGAFG00000004334-10078.161ENSELUG00000006507puf60b10075.137Esox_lucius
ENSGAFG00000004334-10083.068ENSELUG00000018443-10083.865Esox_lucius
ENSGAFG00000004334-9979.042ENSFCAG00000001045PUF6010079.537Felis_catus
ENSGAFG00000004334-9970.270ENSFALG00000001136PUF609771.429Ficedula_albicollis
ENSGAFG00000004334-9979.242ENSFDAG00000017177PUF609179.840Fukomys_damarensis
ENSGAFG00000004334-9990.644ENSFHEG00000021687PUF6010091.176Fundulus_heteroclitus
ENSGAFG00000004334-9981.109ENSFHEG00000020046puf60b10080.723Fundulus_heteroclitus
ENSGAFG00000004334-9966.346ENSGMOG00000006392puf60b9966.731Gadus_morhua
ENSGAFG00000004334-6984.638ENSGALG00000039901PUF609484.638Gallus_gallus
ENSGAFG00000004334-9969.126ENSGACG00000004717puf60b9769.126Gasterosteus_aculeatus
ENSGAFG00000004334-9977.350ENSGACG00000001484-9977.823Gasterosteus_aculeatus
ENSGAFG00000004334-9979.184ENSGAGG00000013289PUF609179.242Gopherus_agassizii
ENSGAFG00000004334-9978.842ENSGGOG00000004646PUF609779.344Gorilla_gorilla
ENSGAFG00000004334-10085.352ENSHBUG00000009634-10085.425Haplochromis_burtoni
ENSGAFG00000004334-9981.109ENSHBUG00000015118puf60b10080.723Haplochromis_burtoni
ENSGAFG00000004334-9979.242ENSHGLG00000006111PUF609179.840Heterocephalus_glaber_female
ENSGAFG00000004334-9979.242ENSHGLG00100012362PUF609179.840Heterocephalus_glaber_male
ENSGAFG00000004334-9976.285ENSHCOG00000015541puf60b9977.563Hippocampus_comes
ENSGAFG00000004334-9974.409ENSHCOG00000000378-9973.108Hippocampus_comes
ENSGAFG00000004334-10080.522ENSIPUG00000002453puf60a10080.460Ictalurus_punctatus
ENSGAFG00000004334-10076.726ENSIPUG00000004660puf60b10076.726Ictalurus_punctatus
ENSGAFG00000004334-9978.776ENSSTOG00000025037PUF609279.537Ictidomys_tridecemlineatus
ENSGAFG00000004334-9978.842ENSJJAG00000001076Puf609279.441Jaculus_jaculus
ENSGAFG00000004334-9981.109ENSKMAG00000016745puf60b10080.777Kryptolebias_marmoratus
ENSGAFG00000004334-9983.607ENSKMAG00000010106-10083.877Kryptolebias_marmoratus
ENSGAFG00000004334-9979.221ENSLBEG00000012505puf60b10079.221Labrus_bergylta
ENSGAFG00000004334-7078.488ENSLACG00000005456PUF609578.674Latimeria_chalumnae
ENSGAFG00000004334-10082.752ENSLOCG00000010106puf60b9882.946Lepisosteus_oculatus
ENSGAFG00000004334-9977.799ENSLAFG00000022929PUF609378.378Loxodonta_africana
ENSGAFG00000004334-9978.842ENSMFAG00000043373PUF609879.344Macaca_fascicularis
ENSGAFG00000004334-9978.842ENSMMUG00000013558PUF609779.344Macaca_mulatta
ENSGAFG00000004334-9978.842ENSMNEG00000031099PUF609779.344Macaca_nemestrina
ENSGAFG00000004334-9978.842ENSMLEG00000040009PUF6010079.441Mandrillus_leucophaeus
ENSGAFG00000004334-9981.314ENSMAMG00000010394puf60b10077.883Mastacembelus_armatus
ENSGAFG00000004334-10088.063ENSMAMG00000019476-9888.063Mastacembelus_armatus
ENSGAFG00000004334-10085.547ENSMZEG00005019425-9885.938Maylandia_zebra
ENSGAFG00000004334-9981.109ENSMZEG00005018515puf60b10080.723Maylandia_zebra
ENSGAFG00000004334-9979.184ENSMGAG00000013070PUF609585.260Meleagris_gallopavo
ENSGAFG00000004334-7183.978ENSMAUG00000014267-8884.348Mesocricetus_auratus
ENSGAFG00000004334-9963.190ENSMAUG00000018549-9565.145Mesocricetus_auratus
ENSGAFG00000004334-9978.958ENSMICG00000012226PUF609879.537Microcebus_murinus
ENSGAFG00000004334-9978.842ENSMOCG00000018780Puf609279.344Microtus_ochrogaster
ENSGAFG00000004334-10080.000ENSMMOG00000018059-9986.473Mola_mola
ENSGAFG00000004334-9981.520ENSMMOG00000004217puf60b10080.971Mola_mola
ENSGAFG00000004334-9979.042ENSMODG00000009161PUF609379.641Monodelphis_domestica
ENSGAFG00000004334-10087.109ENSMALG00000000200-9886.914Monopterus_albus
ENSGAFG00000004334-9973.663ENSMALG00000006797puf60b9773.398Monopterus_albus
ENSGAFG00000004334-9979.042MGP_CAROLIEiJ_G0019910Puf609179.641Mus_caroli
ENSGAFG00000004334-9979.042ENSMUSG00000002524Puf609179.641Mus_musculus
ENSGAFG00000004334-9979.042MGP_PahariEiJ_G0019920Puf609179.641Mus_pahari
ENSGAFG00000004334-9979.042MGP_SPRETEiJ_G0020812Puf609179.641Mus_spretus
ENSGAFG00000004334-9978.571ENSMPUG00000008137PUF609179.344Mustela_putorius_furo
ENSGAFG00000004334-9979.098ENSMLUG00000000238-9279.845Myotis_lucifugus
ENSGAFG00000004334-9976.048ENSMLUG00000013032-9776.647Myotis_lucifugus
ENSGAFG00000004334-9978.842ENSNGAG00000000712Puf6010079.344Nannospalax_galili
ENSGAFG00000004334-10085.714ENSNBRG00000017223-9886.106Neolamprologus_brichardi
ENSGAFG00000004334-8180.193ENSNBRG00000013047puf60b9680.193Neolamprologus_brichardi
ENSGAFG00000004334-9978.842ENSNLEG00000002156PUF609779.441Nomascus_leucogenys
ENSGAFG00000004334-7589.568ENSOPRG00000002147PUF607589.492Ochotona_princeps
ENSGAFG00000004334-7485.380ENSODEG00000014024-8985.380Octodon_degus
ENSGAFG00000004334-9959.336ENSODEG00000015513-9559.557Octodon_degus
ENSGAFG00000004334-9981.109ENSONIG00000006247puf60b9780.583Oreochromis_niloticus
ENSGAFG00000004334-10085.742ENSONIG00000014030-9886.133Oreochromis_niloticus
ENSGAFG00000004334-9765.261ENSOANG00000006962PUF609765.863Ornithorhynchus_anatinus
ENSGAFG00000004334-9980.698ENSORLG00000012279puf60b10080.583Oryzias_latipes
ENSGAFG00000004334-10085.331ENSORLG00000028655-9985.921Oryzias_latipes
ENSGAFG00000004334-9980.698ENSORLG00020007333puf6010080.583Oryzias_latipes_hni
ENSGAFG00000004334-9986.694ENSORLG00020018144-9886.275Oryzias_latipes_hni
ENSGAFG00000004334-9980.368ENSORLG00015007718puf60b10080.658Oryzias_latipes_hsok
ENSGAFG00000004334-9986.694ENSORLG00015016833-9886.275Oryzias_latipes_hsok
ENSGAFG00000004334-10081.781ENSOMEG00000001643puf60b10082.062Oryzias_melastigma
ENSGAFG00000004334-10086.275ENSOMEG00000022185-9887.230Oryzias_melastigma
ENSGAFG00000004334-9978.776ENSOGAG00000006259PUF609279.537Otolemur_garnettii
ENSGAFG00000004334-9976.070ENSOARG00000016235PUF609778.058Ovis_aries
ENSGAFG00000004334-9978.842ENSPPAG00000029933PUF609779.344Pan_paniscus
ENSGAFG00000004334-9979.042ENSPPRG00000003257PUF6010079.641Panthera_pardus
ENSGAFG00000004334-9978.643ENSPTIG00000009795PUF609877.692Panthera_tigris_altaica
ENSGAFG00000004334-9978.764ENSPTRG00000043963-9779.344Pan_troglodytes
ENSGAFG00000004334-9978.842ENSPTRG00000020670PUF609779.344Pan_troglodytes
ENSGAFG00000004334-9978.842ENSPANG00000021936PUF609779.344Papio_anubis
ENSGAFG00000004334-10083.077ENSPKIG00000004295puf60a10089.645Paramormyrops_kingsleyae
ENSGAFG00000004334-9982.305ENSPKIG00000012204puf60b10082.296Paramormyrops_kingsleyae
ENSGAFG00000004334-9978.980ENSPSIG00000004679PUF609878.958Pelodiscus_sinensis
ENSGAFG00000004334-10080.894ENSPMGG00000013444puf60b9980.894Periophthalmus_magnuspinnatus
ENSGAFG00000004334-9978.842ENSPEMG00000008820Puf609279.344Peromyscus_maniculatus_bairdii
ENSGAFG00000004334-9979.042ENSPCIG00000020270PUF609879.537Phascolarctos_cinereus
ENSGAFG00000004334-10096.238ENSPFOG00000011118-9896.238Poecilia_formosa
ENSGAFG00000004334-9980.903ENSPFOG00000019217puf60b9880.723Poecilia_formosa
ENSGAFG00000004334-10096.040ENSPLAG00000017025-9096.040Poecilia_latipinna
ENSGAFG00000004334-9980.903ENSPLAG00000010754puf60b10080.723Poecilia_latipinna
ENSGAFG00000004334-9980.903ENSPMEG00000000838puf60b10080.723Poecilia_mexicana
ENSGAFG00000004334-10096.634ENSPMEG00000009767-9096.634Poecilia_mexicana
ENSGAFG00000004334-9982.600ENSPREG00000005440puf60b10082.377Poecilia_reticulata
ENSGAFG00000004334-8177.404ENSPPYG00000018951-9578.365Pongo_abelii
ENSGAFG00000004334-8178.897ENSPCAG00000014837PUF609979.856Procavia_capensis
ENSGAFG00000004334-9978.776ENSPCOG00000027981PUF609879.344Propithecus_coquereli
ENSGAFG00000004334-9990.909ENSPVAG00000016167PUF608188.750Pteropus_vampyrus
ENSGAFG00000004334-10085.547ENSPNYG00000004273-9885.938Pundamilia_nyererei
ENSGAFG00000004334-9981.109ENSPNYG00000002556puf60b10080.583Pundamilia_nyererei
ENSGAFG00000004334-9981.800ENSPNAG00000019909puf60a9983.200Pygocentrus_nattereri
ENSGAFG00000004334-10078.163ENSPNAG00000019415puf60b8978.163Pygocentrus_nattereri
ENSGAFG00000004334-9979.042ENSRNOG00000009960Puf609279.537Rattus_norvegicus
ENSGAFG00000004334-9978.842ENSRBIG00000035274PUF609779.344Rhinopithecus_bieti
ENSGAFG00000004334-9978.842ENSRROG00000029360PUF609879.344Rhinopithecus_roxellana
ENSGAFG00000004334-9977.445ENSSBOG00000027089PUF609777.992Saimiri_boliviensis_boliviensis
ENSGAFG00000004334-8978.710ENSSHAG00000006668PUF608880.087Sarcophilus_harrisii
ENSGAFG00000004334-10083.750ENSSFOG00015019619puf60b9984.342Scleropages_formosus
ENSGAFG00000004334-9983.570ENSSFOG00015019371puf60a9983.603Scleropages_formosus
ENSGAFG00000004334-7788.849ENSSMAG00000016381puf60b7588.814Scophthalmus_maximus
ENSGAFG00000004334-9986.051ENSSDUG00000007048-9786.248Seriola_dumerili
ENSGAFG00000004334-9983.229ENSSDUG00000009935puf60b9983.229Seriola_dumerili
ENSGAFG00000004334-9981.520ENSSLDG00000024011puf60b10078.639Seriola_lalandi_dorsalis
ENSGAFG00000004334-10084.241ENSSLDG00000007366-10084.630Seriola_lalandi_dorsalis
ENSGAFG00000004334-6873.607ENSSPUG00000013518PUF609275.301Sphenodon_punctatus
ENSGAFG00000004334-9977.445ENSSPAG00000012144puf60b10078.639Stegastes_partitus
ENSGAFG00000004334-9987.603ENSSPAG00000020285-10087.695Stegastes_partitus
ENSGAFG00000004334-9979.042ENSSSCG00000038800PUF609779.641Sus_scrofa
ENSGAFG00000004334-9977.071ENSTGUG00000012797-9977.649Taeniopygia_guttata
ENSGAFG00000004334-9987.190ENSTRUG00000008843-10087.190Takifugu_rubripes
ENSGAFG00000004334-9981.520ENSTRUG00000005420puf60b10078.828Takifugu_rubripes
ENSGAFG00000004334-10083.698ENSTNIG00000003069-9984.294Tetraodon_nigroviridis
ENSGAFG00000004334-9981.520ENSTNIG00000013675puf60b9981.165Tetraodon_nigroviridis
ENSGAFG00000004334-8061.739ENSTBEG00000001899-10063.768Tupaia_belangeri
ENSGAFG00000004334-6682.550ENSTBEG00000002751-9982.550Tupaia_belangeri
ENSGAFG00000004334-9977.563ENSTTRG00000017088PUF6010078.764Tursiops_truncatus
ENSGAFG00000004334-9979.042ENSUAMG00000024917PUF609779.537Ursus_americanus
ENSGAFG00000004334-9976.265ENSUMAG00000000272PUF609276.848Ursus_maritimus
ENSGAFG00000004334-9979.042ENSVVUG00000022527PUF6010079.537Vulpes_vulpes
ENSGAFG00000004334-9978.367ENSXETG00000012469puf609878.443Xenopus_tropicalis
ENSGAFG00000004334-9980.522ENSXCOG00000012355puf60b10080.723Xiphophorus_couchianus
ENSGAFG00000004334-10096.281ENSXMAG00000010507-9896.281Xiphophorus_maculatus
ENSGAFG00000004334-9980.903ENSXMAG00000001862puf60b10080.583Xiphophorus_maculatus

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