EuRBPDB

Description

Ensembl ID: ENSGAFG00000004421 (Gene tree)
Gene ID: -
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 9841 bases
Position: chrNHOQ01002515.1:1148511-1158351
Accession: ZDB-GENE-040407-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006509	Surp	PF01805.20	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006581	-	1212	-	ENSGAFP00000006509	403 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004421	cherp	72	88.927	ENSAPOG00000019215	cherp	97	88.927	Acanthochromis_polyacanthus
ENSGAFG00000004421	cherp	80	82.099	ENSDARG00000021812	cherp	100	82.171	Danio_rerio
ENSGAFG00000004421	cherp	72	64.062	FBgn0261872	scaf6	94	36.017	Drosophila_melanogaster
ENSGAFG00000004421	cherp	87	86.364	ENSORLG00020013142	cherp	82	88.365	Oryzias_latipes_hni
ENSGAFG00000004421	cherp	88	86.686	ENSOMEG00000016947	cherp	75	90.798	Oryzias_melastigma
ENSGAFG00000004421	cherp	80	54.572	ENSPMAG00000001655	-	96	55.758	Petromyzon_marinus
ENSGAFG00000004421	cherp	91	93.443	ENSPLAG00000003350	cherp	98	94.460	Poecilia_latipinna
ENSGAFG00000004421	cherp	87	74.648	ENSSFOG00015008022	cherp	85	79.448	Scleropages_formosus
ENSGAFG00000004421	cherp	91	94.118	ENSXCOG00000005936	cherp	98	94.118	Xiphophorus_couchianus
ENSGAFG00000004421	cherp	85	99.125	ENSXMAG00000008026	cherp	92	99.125	Xiphophorus_maculatus