EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004455 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11578 bases
Position: chrNHOQ01001678.1:13954860-13966437
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006571	RRM_5	PF13893.6	1.6e-10	1	2
ENSGAFP00000006571	RRM_5	PF13893.6	1.6e-10	2	2
ENSGAFP00000006582	RRM_5	PF13893.6	1.9e-10	1	2
ENSGAFP00000006582	RRM_5	PF13893.6	1.9e-10	2	2
ENSGAFP00000006582	RRM_1	PF00076.22	1.4e-32	1	2
ENSGAFP00000006582	RRM_1	PF00076.22	1.4e-32	2	2
ENSGAFP00000006571	RRM_1	PF00076.22	1.5e-32	1	2
ENSGAFP00000006571	RRM_1	PF00076.22	1.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006653	-	2745	-	ENSGAFP00000006582	520 (aa)	-	-
ENSGAFT00000006642	-	1605	-	ENSGAFP00000006571	534 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004455	-	71	63.273	ENSGAFG00000001924	rbm14b	66	62.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004455	-	72	62.230	ENSAPOG00000021712	rbm14b	69	62.324	Acanthochromis_polyacanthus
ENSGAFG00000004455	-	99	86.312	ENSAPOG00000003380	-	100	84.699	Acanthochromis_polyacanthus
ENSGAFG00000004455	-	100	83.906	ENSACIG00000021173	-	100	82.821	Amphilophus_citrinellus
ENSGAFG00000004455	-	68	62.324	ENSACIG00000000381	rbm14b	82	46.516	Amphilophus_citrinellus
ENSGAFG00000004455	-	72	62.816	ENSAOCG00000008941	rbm14b	82	57.106	Amphiprion_ocellaris
ENSGAFG00000004455	-	99	87.189	ENSAOCG00000001659	-	99	85.714	Amphiprion_ocellaris
ENSGAFG00000004455	-	99	87.189	ENSAPEG00000016988	-	100	85.165	Amphiprion_percula
ENSGAFG00000004455	-	72	62.816	ENSAPEG00000003161	rbm14b	82	56.522	Amphiprion_percula
ENSGAFG00000004455	-	69	60.428	ENSATEG00000003034	rbm14b	78	58.690	Anabas_testudineus
ENSGAFG00000004455	-	100	84.440	ENSATEG00000009700	-	97	83.112	Anabas_testudineus
ENSGAFG00000004455	-	68	62.324	ENSACLG00000014355	rbm14b	64	62.324	Astatotilapia_calliptera
ENSGAFG00000004455	-	100	86.148	ENSACLG00000009112	-	97	84.644	Astatotilapia_calliptera
ENSGAFG00000004455	-	73	59.850	ENSAMXG00000007233	rbm14a	83	59.900	Astyanax_mexicanus
ENSGAFG00000004455	-	69	62.637	ENSAMXG00000031225	rbm14b	86	48.211	Astyanax_mexicanus
ENSGAFG00000004455	-	74	52.477	ENSCSEG00000000357	rbm14b	82	52.009	Cynoglossus_semilaevis
ENSGAFG00000004455	-	100	80.682	ENSCSEG00000019690	-	100	80.306	Cynoglossus_semilaevis
ENSGAFG00000004455	-	72	63.177	ENSCVAG00000013776	rbm14b	67	62.676	Cyprinodon_variegatus
ENSGAFG00000004455	-	100	93.117	ENSCVAG00000014858	-	100	92.352	Cyprinodon_variegatus
ENSGAFG00000004455	-	73	59.391	ENSDARG00000012723	rbm14a	81	59.079	Danio_rerio
ENSGAFG00000004455	-	70	62.409	ENSDARG00000103834	rbm14b	64	62.774	Danio_rerio
ENSGAFG00000004455	-	69	64.516	ENSELUG00000004690	rbm14b	79	63.194	Esox_lucius
ENSGAFG00000004455	-	85	56.600	ENSELUG00000023633	rbm14a	82	56.808	Esox_lucius
ENSGAFG00000004455	-	100	91.461	ENSFHEG00000020913	-	100	91.635	Fundulus_heteroclitus
ENSGAFG00000004455	-	74	48.233	ENSFHEG00000021265	rbm14b	84	48.861	Fundulus_heteroclitus
ENSGAFG00000004455	-	73	78.215	ENSGMOG00000010840	-	78	77.690	Gadus_morhua
ENSGAFG00000004455	-	92	83.964	ENSGACG00000020440	-	95	83.871	Gasterosteus_aculeatus
ENSGAFG00000004455	-	68	62.324	ENSHBUG00000016754	rbm14b	64	62.324	Haplochromis_burtoni
ENSGAFG00000004455	-	100	86.148	ENSHBUG00000003665	-	97	86.122	Haplochromis_burtoni
ENSGAFG00000004455	-	100	68.214	ENSHCOG00000004071	-	100	71.273	Hippocampus_comes
ENSGAFG00000004455	-	79	53.162	ENSHCOG00000012571	rbm14b	99	66.667	Hippocampus_comes
ENSGAFG00000004455	-	67	62.271	ENSIPUG00000009089	rbm14b	86	48.523	Ictalurus_punctatus
ENSGAFG00000004455	-	74	55.742	ENSIPUG00000021256	rbm14a	84	55.663	Ictalurus_punctatus
ENSGAFG00000004455	-	71	63.273	ENSKMAG00000020444	rbm14b	66	62.766	Kryptolebias_marmoratus
ENSGAFG00000004455	-	99	85.769	ENSKMAG00000008514	-	99	84.778	Kryptolebias_marmoratus
ENSGAFG00000004455	-	51	63.273	ENSLBEG00000027934	rbm14b	61	62.324	Labrus_bergylta
ENSGAFG00000004455	-	99	82.255	ENSLBEG00000001217	-	99	81.667	Labrus_bergylta
ENSGAFG00000004455	-	71	63.100	ENSMAMG00000014394	rbm14b	78	46.875	Mastacembelus_armatus
ENSGAFG00000004455	-	100	82.576	ENSMAMG00000021313	-	100	81.629	Mastacembelus_armatus
ENSGAFG00000004455	-	68	62.324	ENSMZEG00005020834	rbm14b	65	62.324	Maylandia_zebra
ENSGAFG00000004455	-	100	86.148	ENSMZEG00005001201	-	100	86.122	Maylandia_zebra
ENSGAFG00000004455	-	99	81.238	ENSMMOG00000014501	-	99	81.426	Mola_mola
ENSGAFG00000004455	-	68	57.394	ENSMMOG00000012912	rbm14b	69	57.394	Mola_mola
ENSGAFG00000004455	-	69	57.937	ENSMALG00000015445	rbm14b	83	57.963	Monopterus_albus
ENSGAFG00000004455	-	68	62.324	ENSNBRG00000003378	rbm14b	65	62.324	Neolamprologus_brichardi
ENSGAFG00000004455	-	99	85.714	ENSNBRG00000004960	-	99	84.699	Neolamprologus_brichardi
ENSGAFG00000004455	-	69	60.428	ENSONIG00000013035	rbm14b	82	58.690	Oreochromis_niloticus
ENSGAFG00000004455	-	93	83.047	ENSONIG00000008557	-	95	84.289	Oreochromis_niloticus
ENSGAFG00000004455	-	100	83.015	ENSORLG00000001900	-	100	82.824	Oryzias_latipes
ENSGAFG00000004455	-	73	48.941	ENSORLG00000008051	rbm14b	83	48.148	Oryzias_latipes
ENSGAFG00000004455	-	100	83.015	ENSORLG00020019144	-	100	82.824	Oryzias_latipes_hni
ENSGAFG00000004455	-	73	48.620	ENSORLG00020005551	rbm14b	81	47.835	Oryzias_latipes_hni
ENSGAFG00000004455	-	73	48.729	ENSORLG00015022683	rbm14b	83	47.942	Oryzias_latipes_hsok
ENSGAFG00000004455	-	100	83.588	ENSORLG00015000082	-	100	82.824	Oryzias_latipes_hsok
ENSGAFG00000004455	-	79	86.486	ENSOMEG00000006508	-	96	92.667	Oryzias_melastigma
ENSGAFG00000004455	-	70	63.273	ENSOMEG00000000910	rbm14b	78	57.653	Oryzias_melastigma
ENSGAFG00000004455	-	73	50.873	ENSPKIG00000009078	rbm14b	86	48.380	Paramormyrops_kingsleyae
ENSGAFG00000004455	-	80	79.097	ENSPMGG00000018869	-	93	87.162	Periophthalmus_magnuspinnatus
ENSGAFG00000004455	-	68	62.105	ENSPMGG00000013064	rbm14b	66	62.590	Periophthalmus_magnuspinnatus
ENSGAFG00000004455	-	100	98.848	ENSPFOG00000004843	-	100	98.848	Poecilia_formosa
ENSGAFG00000004455	-	74	47.925	ENSPFOG00000003614	rbm14b	83	47.205	Poecilia_formosa
ENSGAFG00000004455	-	71	63.273	ENSPLAG00000001395	rbm14b	83	47.412	Poecilia_latipinna
ENSGAFG00000004455	-	100	98.848	ENSPLAG00000017359	-	100	98.848	Poecilia_latipinna
ENSGAFG00000004455	-	71	63.636	ENSPMEG00000012911	rbm14b	66	63.121	Poecilia_mexicana
ENSGAFG00000004455	-	100	98.848	ENSPMEG00000004894	-	100	98.848	Poecilia_mexicana
ENSGAFG00000004455	-	71	63.636	ENSPREG00000003013	rbm14b	66	63.636	Poecilia_reticulata
ENSGAFG00000004455	-	100	99.040	ENSPREG00000007274	-	100	99.040	Poecilia_reticulata
ENSGAFG00000004455	-	100	86.148	ENSPNYG00000015906	-	99	84.644	Pundamilia_nyererei
ENSGAFG00000004455	-	68	62.324	ENSPNYG00000023605	rbm14b	65	62.324	Pundamilia_nyererei
ENSGAFG00000004455	-	69	62.637	ENSPNAG00000001977	rbm14b	83	48.211	Pygocentrus_nattereri
ENSGAFG00000004455	-	73	57.794	ENSPNAG00000012473	rbm14a	85	57.590	Pygocentrus_nattereri
ENSGAFG00000004455	-	70	51.693	ENSSFOG00015023796	rbm14b	84	50.542	Scleropages_formosus
ENSGAFG00000004455	-	71	63.899	ENSSMAG00000004522	rbm14b	79	63.899	Scophthalmus_maximus
ENSGAFG00000004455	-	100	83.779	ENSSMAG00000002055	-	100	83.588	Scophthalmus_maximus
ENSGAFG00000004455	-	99	83.273	ENSSDUG00000020756	-	100	85.066	Seriola_dumerili
ENSGAFG00000004455	-	72	62.816	ENSSDUG00000007975	rbm14b	66	62.324	Seriola_dumerili
ENSGAFG00000004455	-	72	62.816	ENSSLDG00000006472	rbm14b	66	62.324	Seriola_lalandi_dorsalis
ENSGAFG00000004455	-	99	82.821	ENSSLDG00000006311	-	99	83.363	Seriola_lalandi_dorsalis
ENSGAFG00000004455	-	72	62.816	ENSSPAG00000004231	rbm14b	65	62.324	Stegastes_partitus
ENSGAFG00000004455	-	99	87.954	ENSSPAG00000010825	-	100	84.810	Stegastes_partitus
ENSGAFG00000004455	-	71	62.319	ENSTRUG00000005716	rbm14b	65	62.319	Takifugu_rubripes
ENSGAFG00000004455	-	100	77.820	ENSTRUG00000009504	-	94	76.154	Takifugu_rubripes
ENSGAFG00000004455	-	99	68.519	ENSTNIG00000000058	-	92	83.422	Tetraodon_nigroviridis
ENSGAFG00000004455	-	69	54.400	ENSTNIG00000006844	rbm14b	79	55.000	Tetraodon_nigroviridis
ENSGAFG00000004455	-	99	98.117	ENSXCOG00000006825	-	99	98.117	Xiphophorus_couchianus
ENSGAFG00000004455	-	71	63.273	ENSXMAG00000008390	rbm14b	66	62.766	Xiphophorus_maculatus
ENSGAFG00000004455	-	100	98.848	ENSXMAG00000000338	-	100	98.692	Xiphophorus_maculatus