EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000004463 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 19305 bases
Position: chrNHOQ01001524.1:224264-243568
Accession: ZDB-GENE-030131-6451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006650	TUDOR	PF00567.24	1.1e-73	1	5
ENSGAFP00000006650	TUDOR	PF00567.24	1.1e-73	2	5
ENSGAFP00000006650	TUDOR	PF00567.24	1.1e-73	3	5
ENSGAFP00000006650	TUDOR	PF00567.24	1.1e-73	4	5
ENSGAFP00000006650	TUDOR	PF00567.24	1.1e-73	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006722	-	3678	-	ENSGAFP00000006650	1225 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004463	rnf17	89	32.463	ENSG00000132972	RNF17	99	32.722	Homo_sapiens
ENSGAFG00000004463	rnf17	90	60.846	ENSAPOG00000017034	rnf17	84	61.045	Acanthochromis_polyacanthus
ENSGAFG00000004463	rnf17	89	32.099	ENSAMEG00000017340	RNF17	74	31.954	Ailuropoda_melanoleuca
ENSGAFG00000004463	rnf17	97	66.102	ENSAOCG00000018283	rnf17	79	66.102	Amphiprion_ocellaris
ENSGAFG00000004463	rnf17	99	62.930	ENSAPEG00000022338	rnf17	93	62.834	Amphiprion_percula
ENSGAFG00000004463	rnf17	89	59.411	ENSATEG00000002067	rnf17	83	59.491	Anabas_testudineus
ENSGAFG00000004463	rnf17	90	31.412	ENSAPLG00000003969	RNF17	83	31.483	Anas_platyrhynchos
ENSGAFG00000004463	rnf17	89	32.535	ENSACAG00000001418	RNF17	74	32.473	Anolis_carolinensis
ENSGAFG00000004463	rnf17	86	30.915	ENSANAG00000029969	RNF17	93	30.017	Aotus_nancymaae
ENSGAFG00000004463	rnf17	96	73.684	ENSACLG00000018279	rnf17	81	73.684	Astatotilapia_calliptera
ENSGAFG00000004463	rnf17	99	45.223	ENSAMXG00000011002	rnf17	92	44.391	Astyanax_mexicanus
ENSGAFG00000004463	rnf17	89	32.600	ENSCJAG00000018937	RNF17	99	33.333	Callithrix_jacchus
ENSGAFG00000004463	rnf17	86	32.506	ENSCAFG00000007418	RNF17	77	32.361	Canis_familiaris
ENSGAFG00000004463	rnf17	89	32.303	ENSCHIG00000026716	RNF17	99	31.873	Capra_hircus
ENSGAFG00000004463	rnf17	89	32.353	ENSTSYG00000000365	RNF17	99	33.537	Carlito_syrichta
ENSGAFG00000004463	rnf17	89	32.108	ENSCCAG00000026725	RNF17	99	32.569	Cebus_capucinus
ENSGAFG00000004463	rnf17	89	32.300	ENSCATG00000040352	RNF17	99	32.722	Cercocebus_atys
ENSGAFG00000004463	rnf17	89	33.113	ENSCLAG00000004127	RNF17	73	33.056	Chinchilla_lanigera
ENSGAFG00000004463	rnf17	89	32.245	ENSCSAG00000018019	RNF17	74	32.152	Chlorocebus_sabaeus
ENSGAFG00000004463	rnf17	89	33.089	ENSCPBG00000020920	RNF17	77	32.976	Chrysemys_picta_bellii
ENSGAFG00000004463	rnf17	89	32.355	ENSCANG00000032927	RNF17	99	32.774	Colobus_angolensis_palliatus
ENSGAFG00000004463	rnf17	89	33.224	ENSCGRG00001022658	Rnf17	72	33.085	Cricetulus_griseus_chok1gshd
ENSGAFG00000004463	rnf17	89	33.224	ENSCGRG00000009924	Rnf17	72	33.085	Cricetulus_griseus_crigri
ENSGAFG00000004463	rnf17	99	53.478	ENSCSEG00000008626	rnf17	91	53.391	Cynoglossus_semilaevis
ENSGAFG00000004463	rnf17	92	56.768	ENSCVAG00000017008	rnf17	100	56.768	Cyprinodon_variegatus
ENSGAFG00000004463	rnf17	97	46.558	ENSDARG00000056387	rnf17	80	46.568	Danio_rerio
ENSGAFG00000004463	rnf17	89	31.609	ENSDNOG00000006115	RNF17	72	31.618	Dasypus_novemcinctus
ENSGAFG00000004463	rnf17	50	33.136	ENSEBUG00000016781	-	83	35.537	Eptatretus_burgeri
ENSGAFG00000004463	rnf17	89	32.461	ENSECAG00000017152	RNF17	72	32.319	Equus_caballus
ENSGAFG00000004463	rnf17	97	48.590	ENSELUG00000005626	rnf17	83	48.608	Esox_lucius
ENSGAFG00000004463	rnf17	89	32.372	ENSFCAG00000004914	RNF17	98	33.750	Felis_catus
ENSGAFG00000004463	rnf17	89	32.348	ENSFALG00000008766	RNF17	78	32.229	Ficedula_albicollis
ENSGAFG00000004463	rnf17	89	32.646	ENSFDAG00000017857	RNF17	72	32.504	Fukomys_damarensis
ENSGAFG00000004463	rnf17	98	78.125	ENSFHEG00000014822	rnf17	81	67.442	Fundulus_heteroclitus
ENSGAFG00000004463	rnf17	51	44.706	ENSGMOG00000015560	-	100	44.706	Gadus_morhua
ENSGAFG00000004463	rnf17	55	37.374	ENSGALG00000045414	-	98	37.374	Gallus_gallus
ENSGAFG00000004463	rnf17	51	57.757	ENSGACG00000001340	-	100	57.757	Gasterosteus_aculeatus
ENSGAFG00000004463	rnf17	76	32.883	ENSGAGG00000016999	RNF17	66	32.718	Gopherus_agassizii
ENSGAFG00000004463	rnf17	90	32.237	ENSGGOG00000014491	RNF17	99	32.722	Gorilla_gorilla
ENSGAFG00000004463	rnf17	96	75.439	ENSHBUG00000003554	rnf17	81	75.439	Haplochromis_burtoni
ENSGAFG00000004463	rnf17	89	32.537	ENSHGLG00000007270	RNF17	72	32.394	Heterocephalus_glaber_female
ENSGAFG00000004463	rnf17	89	32.455	ENSHGLG00100017393	RNF17	73	32.312	Heterocephalus_glaber_male
ENSGAFG00000004463	rnf17	99	48.010	ENSHCOG00000017676	rnf17	99	48.010	Hippocampus_comes
ENSGAFG00000004463	rnf17	90	47.382	ENSIPUG00000001087	rnf17	80	46.988	Ictalurus_punctatus
ENSGAFG00000004463	rnf17	89	32.864	ENSJJAG00000016584	Rnf17	72	32.723	Jaculus_jaculus
ENSGAFG00000004463	rnf17	94	72.881	ENSKMAG00000013403	rnf17	76	72.881	Kryptolebias_marmoratus
ENSGAFG00000004463	rnf17	91	64.865	ENSLBEG00000014910	rnf17	80	64.865	Labrus_bergylta
ENSGAFG00000004463	rnf17	67	36.313	ENSLACG00000000323	RNF17	78	36.151	Latimeria_chalumnae
ENSGAFG00000004463	rnf17	89	44.749	ENSLOCG00000010768	rnf17	66	43.961	Lepisosteus_oculatus
ENSGAFG00000004463	rnf17	89	32.463	ENSMFAG00000032388	RNF17	99	32.875	Macaca_fascicularis
ENSGAFG00000004463	rnf17	89	32.463	ENSMMUG00000014610	RNF17	99	32.875	Macaca_mulatta
ENSGAFG00000004463	rnf17	89	32.463	ENSMNEG00000011234	RNF17	99	32.875	Macaca_nemestrina
ENSGAFG00000004463	rnf17	89	32.432	ENSMLEG00000030227	RNF17	77	32.020	Mandrillus_leucophaeus
ENSGAFG00000004463	rnf17	99	57.132	ENSMAMG00000020403	rnf17	99	57.031	Mastacembelus_armatus
ENSGAFG00000004463	rnf17	96	73.684	ENSMZEG00005019166	rnf17	81	73.684	Maylandia_zebra
ENSGAFG00000004463	rnf17	89	31.148	ENSMGAG00000015138	RNF17	95	30.954	Meleagris_gallopavo
ENSGAFG00000004463	rnf17	89	32.175	ENSMAUG00000004788	Rnf17	72	32.196	Mesocricetus_auratus
ENSGAFG00000004463	rnf17	89	32.261	ENSMICG00000010364	RNF17	98	32.504	Microcebus_murinus
ENSGAFG00000004463	rnf17	64	31.669	ENSMOCG00000011818	-	99	31.669	Microtus_ochrogaster
ENSGAFG00000004463	rnf17	99	57.651	ENSMMOG00000019514	rnf17	99	57.850	Mola_mola
ENSGAFG00000004463	rnf17	89	33.552	ENSMODG00000007827	RNF17	71	33.416	Monodelphis_domestica
ENSGAFG00000004463	rnf17	86	64.912	ENSMALG00000016943	rnf17	78	64.912	Monopterus_albus
ENSGAFG00000004463	rnf17	89	33.443	MGP_CAROLIEiJ_G0019337	Rnf17	73	33.306	Mus_caroli
ENSGAFG00000004463	rnf17	89	33.470	ENSMUSG00000000365	Rnf17	73	33.333	Mus_musculus
ENSGAFG00000004463	rnf17	89	33.635	MGP_PahariEiJ_G0030355	Rnf17	73	33.499	Mus_pahari
ENSGAFG00000004463	rnf17	89	33.553	MGP_SPRETEiJ_G0020228	Rnf17	73	33.416	Mus_spretus
ENSGAFG00000004463	rnf17	89	32.205	ENSMPUG00000013305	RNF17	74	32.060	Mustela_putorius_furo
ENSGAFG00000004463	rnf17	89	32.266	ENSMLUG00000003903	RNF17	74	31.983	Myotis_lucifugus
ENSGAFG00000004463	rnf17	89	32.535	ENSNGAG00000013553	Rnf17	73	32.202	Nannospalax_galili
ENSGAFG00000004463	rnf17	99	54.965	ENSNBRG00000012006	rnf17	99	55.665	Neolamprologus_brichardi
ENSGAFG00000004463	rnf17	89	32.379	ENSNLEG00000013780	RNF17	99	32.817	Nomascus_leucogenys
ENSGAFG00000004463	rnf17	96	78.947	ENSONIG00000015746	rnf17	81	78.947	Oreochromis_niloticus
ENSGAFG00000004463	rnf17	89	32.760	ENSOCUG00000007384	RNF17	73	32.619	Oryctolagus_cuniculus
ENSGAFG00000004463	rnf17	94	68.333	ENSORLG00000012818	rnf17	88	68.333	Oryzias_latipes
ENSGAFG00000004463	rnf17	94	69.492	ENSORLG00020009879	-	79	69.492	Oryzias_latipes_hni
ENSGAFG00000004463	rnf17	94	67.797	ENSORLG00015013027	-	79	67.797	Oryzias_latipes_hsok
ENSGAFG00000004463	rnf17	92	49.233	ENSOMEG00000009891	rnf17	99	49.233	Oryzias_melastigma
ENSGAFG00000004463	rnf17	89	31.997	ENSOGAG00000014803	RNF17	73	31.960	Otolemur_garnettii
ENSGAFG00000004463	rnf17	89	32.105	ENSOARG00000014641	RNF17	73	31.960	Ovis_aries
ENSGAFG00000004463	rnf17	90	32.395	ENSPPAG00000028779	RNF17	99	32.873	Pan_paniscus
ENSGAFG00000004463	rnf17	89	32.484	ENSPPRG00000009230	RNF17	98	33.750	Panthera_pardus
ENSGAFG00000004463	rnf17	89	32.484	ENSPTIG00000001738	RNF17	98	33.750	Panthera_tigris_altaica
ENSGAFG00000004463	rnf17	90	32.395	ENSPTRG00000005713	RNF17	99	32.873	Pan_troglodytes
ENSGAFG00000004463	rnf17	89	32.545	ENSPANG00000007640	RNF17	99	32.875	Papio_anubis
ENSGAFG00000004463	rnf17	90	44.416	ENSPKIG00000001648	rnf17	89	44.618	Paramormyrops_kingsleyae
ENSGAFG00000004463	rnf17	89	34.225	ENSPSIG00000011245	RNF17	99	34.095	Pelodiscus_sinensis
ENSGAFG00000004463	rnf17	89	32.757	ENSPEMG00000008693	Rnf17	72	32.616	Peromyscus_maniculatus_bairdii
ENSGAFG00000004463	rnf17	71	33.631	ENSPCIG00000009190	-	92	33.260	Phascolarctos_cinereus
ENSGAFG00000004463	rnf17	97	96.970	ENSPFOG00000007124	rnf17	80	96.970	Poecilia_formosa
ENSGAFG00000004463	rnf17	96	96.970	ENSPLAG00000006198	rnf17	80	96.970	Poecilia_latipinna
ENSGAFG00000004463	rnf17	96	96.970	ENSPMEG00000022432	rnf17	80	96.970	Poecilia_mexicana
ENSGAFG00000004463	rnf17	96	86.667	ENSPREG00000001414	rnf17	94	78.203	Poecilia_reticulata
ENSGAFG00000004463	rnf17	89	32.026	ENSPPYG00000005215	RNF17	74	31.882	Pongo_abelii
ENSGAFG00000004463	rnf17	86	44.203	ENSPVAG00000013021	RNF17	71	44.203	Pteropus_vampyrus
ENSGAFG00000004463	rnf17	99	46.885	ENSPNAG00000027505	rnf17	91	48.382	Pygocentrus_nattereri
ENSGAFG00000004463	rnf17	89	33.361	ENSRNOG00000008059	Rnf17	73	33.223	Rattus_norvegicus
ENSGAFG00000004463	rnf17	89	32.282	ENSRBIG00000027010	RNF17	77	32.104	Rhinopithecus_bieti
ENSGAFG00000004463	rnf17	89	32.382	ENSRROG00000022801	RNF17	99	32.925	Rhinopithecus_roxellana
ENSGAFG00000004463	rnf17	89	32.871	ENSSBOG00000021661	RNF17	99	33.435	Saimiri_boliviensis_boliviensis
ENSGAFG00000004463	rnf17	89	33.553	ENSSHAG00000005609	RNF17	72	33.416	Sarcophilus_harrisii
ENSGAFG00000004463	rnf17	89	43.810	ENSSFOG00015023037	rnf17	88	43.590	Scleropages_formosus
ENSGAFG00000004463	rnf17	86	66.102	ENSSMAG00000007429	rnf17	78	66.102	Scophthalmus_maximus
ENSGAFG00000004463	rnf17	89	79.310	ENSSDUG00000013530	rnf17	83	79.310	Seriola_dumerili
ENSGAFG00000004463	rnf17	89	74.576	ENSSLDG00000019577	rnf17	81	74.576	Seriola_lalandi_dorsalis
ENSGAFG00000004463	rnf17	79	37.931	ENSSARG00000003016	RNF17	58	37.931	Sorex_araneus
ENSGAFG00000004463	rnf17	88	35.330	ENSSPUG00000008917	RNF17	79	35.404	Sphenodon_punctatus
ENSGAFG00000004463	rnf17	87	60.777	ENSSPAG00000001925	rnf17	82	60.748	Stegastes_partitus
ENSGAFG00000004463	rnf17	89	31.557	ENSSSCG00000009572	RNF17	81	31.224	Sus_scrofa
ENSGAFG00000004463	rnf17	59	33.570	ENSTGUG00000011272	-	99	33.570	Taeniopygia_guttata
ENSGAFG00000004463	rnf17	76	33.764	ENSTGUG00000011267	-	99	33.527	Taeniopygia_guttata
ENSGAFG00000004463	rnf17	96	47.674	ENSTRUG00000015498	rnf17	82	47.695	Takifugu_rubripes
ENSGAFG00000004463	rnf17	89	49.744	ENSTNIG00000015681	rnf17	99	49.828	Tetraodon_nigroviridis
ENSGAFG00000004463	rnf17	72	34.726	ENSTBEG00000000282	RNF17	60	34.726	Tupaia_belangeri
ENSGAFG00000004463	rnf17	81	32.609	ENSTTRG00000012698	RNF17	68	32.609	Tursiops_truncatus
ENSGAFG00000004463	rnf17	59	45.070	ENSVPAG00000011388	RNF17	50	45.070	Vicugna_pacos
ENSGAFG00000004463	rnf17	89	33.054	ENSVVUG00000006226	RNF17	74	32.723	Vulpes_vulpes
ENSGAFG00000004463	rnf17	90	78.467	ENSXCOG00000018295	rnf17	88	78.467	Xiphophorus_couchianus
ENSGAFG00000004463	rnf17	88	79.444	ENSXMAG00000014747	rnf17	88	77.868	Xiphophorus_maculatus