EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004496 (Gene tree)
Gene ID: -
Gene Symbol: grsf1
Alias: wu:fb62c04|zgc:153305
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6896 bases
Position: chrNHOQ01002408.1:367098-373993
Accession: ZDB-GENE-060825-196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006596	RRM_1	PF00076.22	5.5e-24	1	2
ENSGAFP00000006596	RRM_1	PF00076.22	5.5e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006668	-	1706	-	ENSGAFP00000006596	397 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004496	grsf1	76	34.483	ENSGAFG00000009225	esrp2	71	34.483
ENSGAFG00000004496	grsf1	77	57.692	ENSGAFG00000005286	HNRNPH3	71	57.692
ENSGAFG00000004496	grsf1	76	41.212	ENSGAFG00000006280	hnrnph1	80	41.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004496	grsf1	99	64.356	ENSAPOG00000012487	grsf1	99	64.356	Acanthochromis_polyacanthus
ENSGAFG00000004496	grsf1	99	61.845	ENSACIG00000005871	grsf1	99	62.594	Amphilophus_citrinellus
ENSGAFG00000004496	grsf1	99	65.012	ENSAOCG00000017462	-	99	65.012	Amphiprion_ocellaris
ENSGAFG00000004496	grsf1	99	64.851	ENSAPEG00000007240	-	99	64.851	Amphiprion_percula
ENSGAFG00000004496	grsf1	99	62.000	ENSATEG00000007185	grsf1	99	62.000	Anabas_testudineus
ENSGAFG00000004496	grsf1	99	62.808	ENSACLG00000003685	-	99	62.808	Astatotilapia_calliptera
ENSGAFG00000004496	grsf1	81	48.265	ENSAMXG00000012270	grsf1	98	48.265	Astyanax_mexicanus
ENSGAFG00000004496	grsf1	99	56.442	ENSCSEG00000019209	-	99	56.442	Cynoglossus_semilaevis
ENSGAFG00000004496	grsf1	99	72.932	ENSCVAG00000004476	grsf1	99	72.932	Cyprinodon_variegatus
ENSGAFG00000004496	grsf1	83	50.299	ENSDARG00000053021	grsf1	79	50.299	Danio_rerio
ENSGAFG00000004496	grsf1	99	59.158	ENSFHEG00000013358	-	99	59.901	Fundulus_heteroclitus
ENSGAFG00000004496	grsf1	75	50.667	ENSGMOG00000014047	grsf1	99	50.667	Gadus_morhua
ENSGAFG00000004496	grsf1	76	60.123	ENSGACG00000014447	grsf1	96	60.123	Gasterosteus_aculeatus
ENSGAFG00000004496	grsf1	99	62.716	ENSHBUG00000006284	grsf1	99	62.716	Haplochromis_burtoni
ENSGAFG00000004496	grsf1	99	55.446	ENSHCOG00000007715	-	99	55.446	Hippocampus_comes
ENSGAFG00000004496	grsf1	80	52.830	ENSIPUG00000010533	grsf1	80	52.830	Ictalurus_punctatus
ENSGAFG00000004496	grsf1	99	58.294	ENSKMAG00000004528	grsf1	99	59.479	Kryptolebias_marmoratus
ENSGAFG00000004496	grsf1	78	50.309	ENSLBEG00000018100	grsf1	98	50.309	Labrus_bergylta
ENSGAFG00000004496	grsf1	99	62.750	ENSMAMG00000002627	grsf1	99	62.750	Mastacembelus_armatus
ENSGAFG00000004496	grsf1	99	62.808	ENSMZEG00005020633	-	99	62.808	Maylandia_zebra
ENSGAFG00000004496	grsf1	95	60.753	ENSMMOG00000014231	grsf1	99	60.938	Mola_mola
ENSGAFG00000004496	grsf1	99	60.149	ENSMALG00000000251	grsf1	99	60.149	Monopterus_albus
ENSGAFG00000004496	grsf1	99	61.042	ENSNBRG00000017774	grsf1	96	61.042	Neolamprologus_brichardi
ENSGAFG00000004496	grsf1	99	62.716	ENSONIG00000014119	grsf1	99	62.716	Oreochromis_niloticus
ENSGAFG00000004496	grsf1	98	59.645	ENSORLG00000030211	grsf1	98	59.645	Oryzias_latipes
ENSGAFG00000004496	grsf1	81	67.500	ENSORLG00020014383	grsf1	82	67.500	Oryzias_latipes_hni
ENSGAFG00000004496	grsf1	87	63.953	ENSORLG00015006520	grsf1	88	63.953	Oryzias_latipes_hsok
ENSGAFG00000004496	grsf1	83	66.061	ENSOMEG00000009181	grsf1	85	66.364	Oryzias_melastigma
ENSGAFG00000004496	grsf1	82	55.183	ENSPKIG00000019432	grsf1	95	49.246	Paramormyrops_kingsleyae
ENSGAFG00000004496	grsf1	83	61.584	ENSPMGG00000013654	grsf1	93	61.584	Periophthalmus_magnuspinnatus
ENSGAFG00000004496	grsf1	100	90.617	ENSPFOG00000006122	grsf1	100	90.617	Poecilia_formosa
ENSGAFG00000004496	grsf1	100	91.272	ENSPLAG00000020977	grsf1	100	91.521	Poecilia_latipinna
ENSGAFG00000004496	grsf1	100	91.358	ENSPMEG00000012485	grsf1	100	91.358	Poecilia_mexicana
ENSGAFG00000004496	grsf1	100	90.842	ENSPREG00000013383	grsf1	100	91.089	Poecilia_reticulata
ENSGAFG00000004496	grsf1	99	62.871	ENSPNYG00000005379	grsf1	99	62.871	Pundamilia_nyererei
ENSGAFG00000004496	grsf1	86	52.187	ENSPNAG00000014912	grsf1	83	52.187	Pygocentrus_nattereri
ENSGAFG00000004496	grsf1	82	46.526	ENSSFOG00015014620	grsf1	83	46.526	Scleropages_formosus
ENSGAFG00000004496	grsf1	81	61.875	ENSSMAG00000014181	grsf1	69	61.875	Scophthalmus_maximus
ENSGAFG00000004496	grsf1	99	59.548	ENSSDUG00000009397	-	98	62.145	Seriola_dumerili
ENSGAFG00000004496	grsf1	99	59.446	ENSSLDG00000025494	grsf1	99	59.446	Seriola_lalandi_dorsalis
ENSGAFG00000004496	grsf1	99	63.210	ENSSPAG00000023296	grsf1	99	63.210	Stegastes_partitus
ENSGAFG00000004496	grsf1	97	56.154	ENSTRUG00000015354	grsf1	99	56.219	Takifugu_rubripes
ENSGAFG00000004496	grsf1	82	56.646	ENSTNIG00000015350	-	99	56.646	Tetraodon_nigroviridis
ENSGAFG00000004496	grsf1	99	91.667	ENSXMAG00000029710	grsf1	99	91.667	Xiphophorus_maculatus