EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004701 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 23279 bases
Position: chrNHOQ01001524.1:434526-457804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000006891	RNase_Zc3h12a	PF11977.8	2.3e-64	1	1
ENSGAFP00000006900	RNase_Zc3h12a	PF11977.8	2.3e-64	1	1
ENSGAFP00000006906	RNase_Zc3h12a	PF11977.8	2.3e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000006975	-	3701	-	ENSGAFP00000006900	897 (aa)	-	UPI000DD1BD9A
ENSGAFT00000006981	-	3659	-	ENSGAFP00000006906	897 (aa)	-	UPI000DD1BD9A
ENSGAFT00000006966	-	3687	-	ENSGAFP00000006891	897 (aa)	-	UPI000DD1BD9A

Gene Model

Click here to download ENSGAFG00000004701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004701	-	57	74.834	ENSGAFG00000006871	zc3h12b	56	75.166
ENSGAFG00000004701	-	99	43.496	ENSGAFG00000005290	-	87	47.312

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004701	-	51	74.919	ENSACIG00000009787	zc3h12b	51	73.616	Amphilophus_citrinellus
ENSGAFG00000004701	-	99	59.695	ENSACIG00000005689	-	77	83.065	Amphilophus_citrinellus
ENSGAFG00000004701	-	51	71.987	ENSACAG00000013582	ZC3H12B	51	71.795	Anolis_carolinensis
ENSGAFG00000004701	-	55	73.139	ENSANAG00000010296	ZC3H12B	51	72.436	Aotus_nancymaae
ENSGAFG00000004701	-	51	74.434	ENSACLG00000007669	zc3h12b	57	73.290	Astatotilapia_calliptera
ENSGAFG00000004701	-	86	51.232	ENSAMXG00000005320	-	99	43.497	Astyanax_mexicanus
ENSGAFG00000004701	-	86	50.825	ENSAMXG00000038308	-	99	42.873	Astyanax_mexicanus
ENSGAFG00000004701	-	51	72.524	ENSBTAG00000002206	ZC3H12B	51	72.436	Bos_taurus
ENSGAFG00000004701	-	55	73.463	ENSCJAG00000001427	ZC3H12B	51	72.756	Callithrix_jacchus
ENSGAFG00000004701	-	51	72.756	ENSCAFG00000031307	ZC3H12B	51	72.115	Canis_familiaris
ENSGAFG00000004701	-	51	72.756	ENSCAFG00020017995	ZC3H12B	51	72.115	Canis_lupus_dingo
ENSGAFG00000004701	-	51	73.633	ENSTSYG00000011302	ZC3H12B	51	72.990	Carlito_syrichta
ENSGAFG00000004701	-	55	73.139	ENSCCAG00000030171	ZC3H12B	51	72.436	Cebus_capucinus
ENSGAFG00000004701	-	51	73.463	ENSCATG00000044845	ZC3H12B	51	72.756	Cercocebus_atys
ENSGAFG00000004701	-	55	66.006	ENSCPBG00000006983	ZC3H12B	57	65.922	Chrysemys_picta_bellii
ENSGAFG00000004701	-	51	73.463	ENSCANG00000006746	ZC3H12B	51	72.756	Colobus_angolensis_palliatus
ENSGAFG00000004701	-	51	73.290	ENSCGRG00001018643	Zc3h12b	51	72.581	Cricetulus_griseus_chok1gshd
ENSGAFG00000004701	-	51	73.290	ENSCGRG00000015623	Zc3h12b	51	72.581	Cricetulus_griseus_crigri
ENSGAFG00000004701	-	62	67.042	ENSDARG00000062463	zc3h12b	64	66.197	Danio_rerio
ENSGAFG00000004701	-	51	72.168	ENSDNOG00000038439	ZC3H12B	54	71.474	Dasypus_novemcinctus
ENSGAFG00000004701	-	53	71.517	ENSDORG00000024832	Zc3h12b	53	70.859	Dipodomys_ordii
ENSGAFG00000004701	-	57	73.941	ENSELUG00000010689	zc3h12b	50	73.290	Esox_lucius
ENSGAFG00000004701	-	51	73.077	ENSFCAG00000032299	ZC3H12B	51	72.436	Felis_catus
ENSGAFG00000004701	-	55	71.885	ENSFDAG00000014258	ZC3H12B	54	71.704	Fukomys_damarensis
ENSGAFG00000004701	-	100	76.143	ENSFHEG00000014717	-	95	93.092	Fundulus_heteroclitus
ENSGAFG00000004701	-	55	66.387	ENSGALG00000039391	ZC3H12B	57	65.922	Gallus_gallus
ENSGAFG00000004701	-	53	76.692	ENSGACG00000020334	zc3h12b	52	87.097	Gasterosteus_aculeatus
ENSGAFG00000004701	-	55	66.289	ENSGAGG00000005569	ZC3H12B	58	66.201	Gopherus_agassizii
ENSGAFG00000004701	-	84	64.858	ENSHBUG00000003376	-	87	80.556	Haplochromis_burtoni
ENSGAFG00000004701	-	51	74.434	ENSHBUG00000000645	zc3h12b	57	73.290	Haplochromis_burtoni
ENSGAFG00000004701	-	51	70.794	ENSHGLG00000003107	ZC3H12B	51	71.704	Heterocephalus_glaber_female
ENSGAFG00000004701	-	51	70.794	ENSHGLG00100010721	ZC3H12B	51	71.704	Heterocephalus_glaber_male
ENSGAFG00000004701	-	57	73.463	ENSHCOG00000008487	zc3h12b	57	74.834	Hippocampus_comes
ENSGAFG00000004701	-	52	71.850	ENSHCOG00000017425	-	87	72.121	Hippocampus_comes
ENSGAFG00000004701	-	59	72.000	ENSIPUG00000016745	zc3h12b	52	72.136	Ictalurus_punctatus
ENSGAFG00000004701	-	99	44.300	ENSIPUG00000014830	-	99	44.408	Ictalurus_punctatus
ENSGAFG00000004701	-	51	72.436	ENSSTOG00000020962	ZC3H12B	51	71.795	Ictidomys_tridecemlineatus
ENSGAFG00000004701	-	57	73.770	ENSKMAG00000004921	zc3h12b	57	74.834	Kryptolebias_marmoratus
ENSGAFG00000004701	-	51	74.434	ENSLBEG00000006448	zc3h12b	50	73.616	Labrus_bergylta
ENSGAFG00000004701	-	99	43.892	ENSLOCG00000010717	-	97	44.896	Lepisosteus_oculatus
ENSGAFG00000004701	-	57	70.186	ENSLAFG00000014891	ZC3H12B	56	70.625	Loxodonta_africana
ENSGAFG00000004701	-	51	73.463	ENSMFAG00000042237	ZC3H12B	51	72.756	Macaca_fascicularis
ENSGAFG00000004701	-	51	73.463	ENSMMUG00000012261	ZC3H12B	51	72.756	Macaca_mulatta
ENSGAFG00000004701	-	51	73.463	ENSMNEG00000043003	ZC3H12B	51	72.756	Macaca_nemestrina
ENSGAFG00000004701	-	51	73.463	ENSMLEG00000042630	ZC3H12B	51	72.756	Mandrillus_leucophaeus
ENSGAFG00000004701	-	51	74.434	ENSMZEG00005007548	zc3h12b	57	73.290	Maylandia_zebra
ENSGAFG00000004701	-	55	66.106	ENSMGAG00000000759	ZC3H12B	56	65.922	Meleagris_gallopavo
ENSGAFG00000004701	-	51	73.616	ENSMAUG00000017800	Zc3h12b	51	72.903	Mesocricetus_auratus
ENSGAFG00000004701	-	51	74.110	ENSMICG00000010697	ZC3H12B	51	73.718	Microcebus_murinus
ENSGAFG00000004701	-	99	58.677	ENSMALG00000016807	-	81	79.710	Monopterus_albus
ENSGAFG00000004701	-	51	66.561	ENSMALG00000021153	zc3h12b	53	64.968	Monopterus_albus
ENSGAFG00000004701	-	51	73.616	ENSMUSG00000035045	Zc3h12b	66	91.429	Mus_musculus
ENSGAFG00000004701	-	58	63.255	MGP_PahariEiJ_G0031787	Zc3h12b	51	72.258	Mus_pahari
ENSGAFG00000004701	-	51	73.616	MGP_SPRETEiJ_G0034413	Zc3h12b	51	72.903	Mus_spretus
ENSGAFG00000004701	-	51	72.436	ENSMPUG00000001162	ZC3H12B	52	71.384	Mustela_putorius_furo
ENSGAFG00000004701	-	52	73.482	ENSMLUG00000013635	ZC3H12B	53	73.163	Myotis_lucifugus
ENSGAFG00000004701	-	57	74.434	ENSNBRG00000014889	zc3h12b	57	72.964	Neolamprologus_brichardi
ENSGAFG00000004701	-	51	73.463	ENSNLEG00000000383	ZC3H12B	51	72.756	Nomascus_leucogenys
ENSGAFG00000004701	-	77	40.362	ENSMEUG00000014075	ZC3H12B	62	66.776	Notamacropus_eugenii
ENSGAFG00000004701	-	51	74.257	ENSONIG00000012867	zc3h12b	57	73.377	Oreochromis_niloticus
ENSGAFG00000004701	-	51	73.077	ENSOCUG00000006130	ZC3H12B	51	72.756	Oryctolagus_cuniculus
ENSGAFG00000004701	-	99	57.470	ENSORLG00000009188	-	98	81.682	Oryzias_latipes
ENSGAFG00000004701	-	57	73.139	ENSORLG00000009556	zc3h12b	58	73.841	Oryzias_latipes
ENSGAFG00000004701	-	57	73.139	ENSORLG00020021793	zc3h12b	57	73.841	Oryzias_latipes_hni
ENSGAFG00000004701	-	99	56.987	ENSORLG00020019033	-	95	81.682	Oryzias_latipes_hni
ENSGAFG00000004701	-	57	73.463	ENSORLG00015004818	zc3h12b	57	74.172	Oryzias_latipes_hsok
ENSGAFG00000004701	-	99	57.314	ENSORLG00015020619	-	99	76.136	Oryzias_latipes_hsok
ENSGAFG00000004701	-	99	57.675	ENSOMEG00000018642	-	100	58.333	Oryzias_melastigma
ENSGAFG00000004701	-	57	74.503	ENSOMEG00000005768	zc3h12b	57	74.503	Oryzias_melastigma
ENSGAFG00000004701	-	51	73.463	ENSOGAG00000029439	ZC3H12B	51	72.436	Otolemur_garnettii
ENSGAFG00000004701	-	51	71.885	ENSOARG00000004959	ZC3H12B	51	71.795	Ovis_aries
ENSGAFG00000004701	-	51	73.463	ENSPANG00000007944	ZC3H12B	51	72.756	Papio_anubis
ENSGAFG00000004701	-	99	45.978	ENSPKIG00000012595	-	94	45.058	Paramormyrops_kingsleyae
ENSGAFG00000004701	-	57	74.257	ENSPKIG00000012946	zc3h12b	58	72.964	Paramormyrops_kingsleyae
ENSGAFG00000004701	-	56	74.593	ENSPKIG00000019893	ZC3H12B	64	66.391	Paramormyrops_kingsleyae
ENSGAFG00000004701	-	55	65.385	ENSPSIG00000016853	ZC3H12B	57	65.363	Pelodiscus_sinensis
ENSGAFG00000004701	-	70	56.984	ENSPCIG00000020264	ZC3H12B	74	56.984	Phascolarctos_cinereus
ENSGAFG00000004701	-	57	74.503	ENSPFOG00000019365	zc3h12b	56	75.166	Poecilia_formosa
ENSGAFG00000004701	-	57	74.834	ENSPLAG00000011981	zc3h12b	53	75.497	Poecilia_latipinna
ENSGAFG00000004701	-	57	74.172	ENSPREG00000020794	zc3h12b	58	71.739	Poecilia_reticulata
ENSGAFG00000004701	-	51	73.786	ENSPCOG00000020467	ZC3H12B	51	73.077	Propithecus_coquereli
ENSGAFG00000004701	-	57	74.434	ENSPNYG00000018012	zc3h12b	57	73.290	Pundamilia_nyererei
ENSGAFG00000004701	-	84	82.692	ENSPNYG00000007151	-	99	82.692	Pundamilia_nyererei
ENSGAFG00000004701	-	58	72.293	ENSPNAG00000002567	zc3h12b	58	72.816	Pygocentrus_nattereri
ENSGAFG00000004701	-	90	56.281	ENSPNAG00000017483	-	92	55.791	Pygocentrus_nattereri
ENSGAFG00000004701	-	51	73.941	ENSRNOG00000011508	Zc3h12b	83	61.348	Rattus_norvegicus
ENSGAFG00000004701	-	51	73.463	ENSRBIG00000036402	ZC3H12B	51	72.756	Rhinopithecus_bieti
ENSGAFG00000004701	-	51	73.463	ENSRROG00000036004	ZC3H12B	51	72.756	Rhinopithecus_roxellana
ENSGAFG00000004701	-	55	73.139	ENSSBOG00000004095	ZC3H12B	51	72.436	Saimiri_boliviensis_boliviensis
ENSGAFG00000004701	-	57	73.290	ENSSFOG00015008769	zc3h12b	57	73.290	Scleropages_formosus
ENSGAFG00000004701	-	57	73.941	ENSSMAG00000018309	zc3h12b	57	72.638	Scophthalmus_maximus
ENSGAFG00000004701	-	51	74.593	ENSSDUG00000014078	zc3h12b	83	70.690	Seriola_dumerili
ENSGAFG00000004701	-	51	74.593	ENSSPAG00000022460	zc3h12b	57	73.941	Stegastes_partitus
ENSGAFG00000004701	-	59	63.021	ENSSSCG00000012367	ZC3H12B	51	72.756	Sus_scrofa
ENSGAFG00000004701	-	55	67.131	ENSTGUG00000002846	ZC3H12B	57	66.387	Taeniopygia_guttata
ENSGAFG00000004701	-	53	78.592	ENSTRUG00000015402	-	96	78.592	Takifugu_rubripes
ENSGAFG00000004701	-	71	53.750	ENSTNIG00000015684	-	100	53.281	Tetraodon_nigroviridis
ENSGAFG00000004701	-	51	71.565	ENSUAMG00000005098	ZC3H12B	51	72.756	Ursus_americanus
ENSGAFG00000004701	-	51	71.565	ENSUMAG00000017054	ZC3H12B	51	72.756	Ursus_maritimus
ENSGAFG00000004701	-	51	72.756	ENSVVUG00000022686	ZC3H12B	51	72.115	Vulpes_vulpes
ENSGAFG00000004701	-	99	86.199	ENSXCOG00000007996	-	98	91.887	Xiphophorus_couchianus
ENSGAFG00000004701	-	57	74.503	ENSXCOG00000006151	zc3h12b	56	74.834	Xiphophorus_couchianus
ENSGAFG00000004701	-	57	74.503	ENSXMAG00000018548	zc3h12b	56	74.834	Xiphophorus_maculatus