EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004706 (Gene tree)
Gene ID: -
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6862 bases
Position: chrNHOQ01001000.1:1521556-1528417
Accession: ZDB-GENE-041001-215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007001	DEAD	PF00270.29	4.3e-73	1	1
ENSGAFP00000007029	DEAD	PF00270.29	5.4e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007104	-	3374	-	ENSGAFP00000007029	762 (aa)	-	-
ENSGAFT00000007076	-	3484	-	ENSGAFP00000007001	740 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004706	ddx1	54	33.871	ENSGAFG00000016509	ddx4	55	33.871
ENSGAFG00000004706	ddx1	53	40.678	ENSGAFG00000015865	-	71	38.806
ENSGAFG00000004706	ddx1	55	32.258	ENSGAFG00000017380	ddx5	72	32.258
ENSGAFG00000004706	ddx1	55	33.708	ENSGAFG00000005980	DDX41	52	40.157
ENSGAFG00000004706	ddx1	58	47.458	ENSGAFG00000017403	ddx47	72	47.458
ENSGAFG00000004706	ddx1	53	40.678	ENSGAFG00000020279	ddx6	71	38.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004706	ddx1	100	83.649	ENSG00000079785	DDX1	100	83.649	Homo_sapiens
ENSGAFG00000004706	ddx1	100	91.622	ENSAPOG00000003166	ddx1	100	91.622	Acanthochromis_polyacanthus
ENSGAFG00000004706	ddx1	99	83.491	ENSAMEG00000001071	DDX1	99	83.491	Ailuropoda_melanoleuca
ENSGAFG00000004706	ddx1	89	91.298	ENSACIG00000017422	ddx1	99	92.061	Amphilophus_citrinellus
ENSGAFG00000004706	ddx1	89	89.970	ENSAOCG00000015436	ddx1	94	91.667	Amphiprion_ocellaris
ENSGAFG00000004706	ddx1	100	92.432	ENSAPEG00000007699	ddx1	100	92.432	Amphiprion_percula
ENSGAFG00000004706	ddx1	94	93.553	ENSATEG00000003965	ddx1	98	92.824	Anabas_testudineus
ENSGAFG00000004706	ddx1	100	84.946	ENSAPLG00000011093	DDX1	100	84.946	Anas_platyrhynchos
ENSGAFG00000004706	ddx1	94	84.814	ENSACAG00000011036	DDX1	100	84.692	Anolis_carolinensis
ENSGAFG00000004706	ddx1	100	83.919	ENSANAG00000037912	DDX1	100	83.919	Aotus_nancymaae
ENSGAFG00000004706	ddx1	99	91.995	ENSACLG00000008850	ddx1	99	91.145	Astatotilapia_calliptera
ENSGAFG00000004706	ddx1	100	89.189	ENSAMXG00000002100	ddx1	100	89.189	Astyanax_mexicanus
ENSGAFG00000004706	ddx1	100	84.459	ENSBTAG00000009906	DDX1	100	84.459	Bos_taurus
ENSGAFG00000004706	ddx1	98	47.490	WBGene00021938	Y55F3BR.1	98	47.490	Caenorhabditis_elegans
ENSGAFG00000004706	ddx1	100	83.649	ENSCJAG00000007076	DDX1	100	83.649	Callithrix_jacchus
ENSGAFG00000004706	ddx1	100	84.189	ENSCAFG00000003686	DDX1	100	84.189	Canis_familiaris
ENSGAFG00000004706	ddx1	100	84.189	ENSCAFG00020026083	DDX1	100	84.189	Canis_lupus_dingo
ENSGAFG00000004706	ddx1	100	84.054	ENSCHIG00000011046	DDX1	100	84.054	Capra_hircus
ENSGAFG00000004706	ddx1	100	84.054	ENSTSYG00000002477	-	100	84.054	Carlito_syrichta
ENSGAFG00000004706	ddx1	99	60.516	ENSTSYG00000037396	-	97	62.671	Carlito_syrichta
ENSGAFG00000004706	ddx1	86	68.585	ENSCAPG00000008906	-	93	68.585	Cavia_aperea
ENSGAFG00000004706	ddx1	88	81.776	ENSCPOG00000009816	-	96	81.776	Cavia_porcellus
ENSGAFG00000004706	ddx1	68	82.669	ENSCPOG00000032467	-	100	82.669	Cavia_porcellus
ENSGAFG00000004706	ddx1	100	83.649	ENSCCAG00000030085	DDX1	100	83.649	Cebus_capucinus
ENSGAFG00000004706	ddx1	100	83.784	ENSCATG00000033924	DDX1	100	83.784	Cercocebus_atys
ENSGAFG00000004706	ddx1	100	84.324	ENSCLAG00000005434	DDX1	100	84.324	Chinchilla_lanigera
ENSGAFG00000004706	ddx1	100	83.784	ENSCSAG00000007883	DDX1	100	83.784	Chlorocebus_sabaeus
ENSGAFG00000004706	ddx1	70	88.124	ENSCHOG00000002171	DDX1	70	88.124	Choloepus_hoffmanni
ENSGAFG00000004706	ddx1	99	78.940	ENSCPBG00000013330	DDX1	99	84.084	Chrysemys_picta_bellii
ENSGAFG00000004706	ddx1	100	66.220	ENSCING00000001176	-	100	66.444	Ciona_intestinalis
ENSGAFG00000004706	ddx1	98	62.088	ENSCSAVG00000003028	-	99	62.088	Ciona_savignyi
ENSGAFG00000004706	ddx1	100	83.784	ENSCANG00000031530	DDX1	100	83.784	Colobus_angolensis_palliatus
ENSGAFG00000004706	ddx1	100	83.514	ENSCGRG00001013025	Ddx1	100	83.514	Cricetulus_griseus_chok1gshd
ENSGAFG00000004706	ddx1	100	83.514	ENSCGRG00000000676	Ddx1	100	83.514	Cricetulus_griseus_crigri
ENSGAFG00000004706	ddx1	99	92.643	ENSCSEG00000002630	ddx1	100	92.643	Cynoglossus_semilaevis
ENSGAFG00000004706	ddx1	99	95.232	ENSCVAG00000020927	ddx1	100	95.232	Cyprinodon_variegatus
ENSGAFG00000004706	ddx1	100	87.973	ENSDARG00000032117	ddx1	100	88.011	Danio_rerio
ENSGAFG00000004706	ddx1	100	84.054	ENSDNOG00000006905	DDX1	100	84.054	Dasypus_novemcinctus
ENSGAFG00000004706	ddx1	100	84.054	ENSDORG00000012847	Ddx1	100	84.054	Dipodomys_ordii
ENSGAFG00000004706	ddx1	98	59.644	FBgn0015075	Ddx1	99	60.055	Drosophila_melanogaster
ENSGAFG00000004706	ddx1	100	75.946	ENSETEG00000014259	DDX1	100	75.946	Echinops_telfairi
ENSGAFG00000004706	ddx1	64	76.271	ENSEBUG00000009800	-	99	76.271	Eptatretus_burgeri
ENSGAFG00000004706	ddx1	100	84.324	ENSEASG00005009335	DDX1	92	84.324	Equus_asinus_asinus
ENSGAFG00000004706	ddx1	94	83.501	ENSECAG00000016396	DDX1	100	83.501	Equus_caballus
ENSGAFG00000004706	ddx1	88	81.698	ENSEEUG00000001606	DDX1	89	81.698	Erinaceus_europaeus
ENSGAFG00000004706	ddx1	100	86.910	ENSELUG00000006743	ddx1	100	86.910	Esox_lucius
ENSGAFG00000004706	ddx1	100	83.784	ENSFCAG00000004680	DDX1	100	83.784	Felis_catus
ENSGAFG00000004706	ddx1	100	85.270	ENSFALG00000008696	DDX1	100	85.270	Ficedula_albicollis
ENSGAFG00000004706	ddx1	100	83.649	ENSFDAG00000021305	DDX1	100	83.649	Fukomys_damarensis
ENSGAFG00000004706	ddx1	100	94.865	ENSFHEG00000008444	ddx1	100	94.865	Fundulus_heteroclitus
ENSGAFG00000004706	ddx1	100	85.330	ENSGMOG00000011300	ddx1	100	85.330	Gadus_morhua
ENSGAFG00000004706	ddx1	100	84.865	ENSGALG00000016461	DDX1	100	84.865	Gallus_gallus
ENSGAFG00000004706	ddx1	100	89.865	ENSGACG00000011162	ddx1	100	89.865	Gasterosteus_aculeatus
ENSGAFG00000004706	ddx1	100	84.730	ENSGAGG00000021020	DDX1	100	84.730	Gopherus_agassizii
ENSGAFG00000004706	ddx1	100	83.649	ENSGGOG00000012482	DDX1	100	83.649	Gorilla_gorilla
ENSGAFG00000004706	ddx1	100	91.892	ENSHBUG00000014069	ddx1	100	91.892	Haplochromis_burtoni
ENSGAFG00000004706	ddx1	100	83.378	ENSHGLG00000000801	DDX1	100	83.378	Heterocephalus_glaber_female
ENSGAFG00000004706	ddx1	99	83.243	ENSHGLG00100000711	DDX1	100	83.243	Heterocephalus_glaber_male
ENSGAFG00000004706	ddx1	100	91.351	ENSHCOG00000011492	ddx1	96	91.351	Hippocampus_comes
ENSGAFG00000004706	ddx1	100	86.892	ENSIPUG00000003494	ddx1	100	86.892	Ictalurus_punctatus
ENSGAFG00000004706	ddx1	99	83.924	ENSSTOG00000003977	DDX1	100	83.924	Ictidomys_tridecemlineatus
ENSGAFG00000004706	ddx1	89	79.084	ENSJJAG00000013315	Ddx1	100	79.084	Jaculus_jaculus
ENSGAFG00000004706	ddx1	100	94.189	ENSKMAG00000011340	ddx1	100	94.189	Kryptolebias_marmoratus
ENSGAFG00000004706	ddx1	88	86.565	ENSLBEG00000008692	ddx1	99	86.565	Labrus_bergylta
ENSGAFG00000004706	ddx1	100	84.054	ENSLACG00000010529	DDX1	100	84.054	Latimeria_chalumnae
ENSGAFG00000004706	ddx1	100	85.389	ENSLOCG00000016473	ddx1	100	85.389	Lepisosteus_oculatus
ENSGAFG00000004706	ddx1	99	84.803	ENSLAFG00000002213	DDX1	99	84.803	Loxodonta_africana
ENSGAFG00000004706	ddx1	100	83.784	ENSMFAG00000033987	DDX1	100	83.784	Macaca_fascicularis
ENSGAFG00000004706	ddx1	100	83.784	ENSMMUG00000023437	DDX1	100	83.784	Macaca_mulatta
ENSGAFG00000004706	ddx1	100	83.784	ENSMNEG00000029189	DDX1	100	83.784	Macaca_nemestrina
ENSGAFG00000004706	ddx1	100	83.784	ENSMLEG00000030787	DDX1	100	83.784	Mandrillus_leucophaeus
ENSGAFG00000004706	ddx1	100	93.243	ENSMAMG00000015916	ddx1	100	93.243	Mastacembelus_armatus
ENSGAFG00000004706	ddx1	99	92.266	ENSMZEG00005015207	ddx1	99	91.450	Maylandia_zebra
ENSGAFG00000004706	ddx1	99	80.894	ENSMGAG00000014025	DDX1	100	80.894	Meleagris_gallopavo
ENSGAFG00000004706	ddx1	64	98.182	ENSMAUG00000016156	Ddx1	100	98.182	Mesocricetus_auratus
ENSGAFG00000004706	ddx1	100	84.189	ENSMICG00000001023	DDX1	100	84.189	Microcebus_murinus
ENSGAFG00000004706	ddx1	100	83.514	ENSMOCG00000000257	Ddx1	100	83.514	Microtus_ochrogaster
ENSGAFG00000004706	ddx1	89	89.924	ENSMMOG00000015397	ddx1	99	89.924	Mola_mola
ENSGAFG00000004706	ddx1	99	84.668	ENSMODG00000010275	DDX1	99	84.668	Monodelphis_domestica
ENSGAFG00000004706	ddx1	100	92.838	ENSMALG00000016409	ddx1	100	92.838	Monopterus_albus
ENSGAFG00000004706	ddx1	100	83.649	MGP_CAROLIEiJ_G0017622	Ddx1	100	83.649	Mus_caroli
ENSGAFG00000004706	ddx1	100	83.514	ENSMUSG00000037149	Ddx1	100	83.514	Mus_musculus
ENSGAFG00000004706	ddx1	100	83.784	MGP_PahariEiJ_G0029378	Ddx1	100	83.784	Mus_pahari
ENSGAFG00000004706	ddx1	100	83.514	MGP_SPRETEiJ_G0018464	Ddx1	97	86.538	Mus_spretus
ENSGAFG00000004706	ddx1	100	83.784	ENSMPUG00000013606	DDX1	100	83.784	Mustela_putorius_furo
ENSGAFG00000004706	ddx1	99	83.560	ENSMLUG00000003027	DDX1	98	83.560	Myotis_lucifugus
ENSGAFG00000004706	ddx1	99	83.651	ENSNGAG00000015783	Ddx1	100	83.651	Nannospalax_galili
ENSGAFG00000004706	ddx1	78	88.083	ENSNBRG00000020677	ddx1	94	88.083	Neolamprologus_brichardi
ENSGAFG00000004706	ddx1	100	83.784	ENSNLEG00000014417	DDX1	100	83.784	Nomascus_leucogenys
ENSGAFG00000004706	ddx1	99	82.900	ENSMEUG00000008254	DDX1	99	82.900	Notamacropus_eugenii
ENSGAFG00000004706	ddx1	100	60.000	ENSOPRG00000004290	DDX1	100	60.000	Ochotona_princeps
ENSGAFG00000004706	ddx1	100	84.324	ENSODEG00000000569	DDX1	100	84.324	Octodon_degus
ENSGAFG00000004706	ddx1	100	92.713	ENSONIG00000000513	ddx1	100	92.713	Oreochromis_niloticus
ENSGAFG00000004706	ddx1	75	81.900	ENSOANG00000005450	DDX1	99	81.900	Ornithorhynchus_anatinus
ENSGAFG00000004706	ddx1	100	84.054	ENSOCUG00000007010	DDX1	100	84.054	Oryctolagus_cuniculus
ENSGAFG00000004706	ddx1	100	92.297	ENSORLG00000016709	ddx1	100	92.297	Oryzias_latipes
ENSGAFG00000004706	ddx1	99	92.098	ENSORLG00020003290	ddx1	100	92.098	Oryzias_latipes_hni
ENSGAFG00000004706	ddx1	100	91.892	ENSORLG00015022438	ddx1	100	91.892	Oryzias_latipes_hsok
ENSGAFG00000004706	ddx1	100	87.568	ENSOMEG00000017620	ddx1	100	87.568	Oryzias_melastigma
ENSGAFG00000004706	ddx1	99	83.832	ENSOGAG00000008730	DDX1	100	83.832	Otolemur_garnettii
ENSGAFG00000004706	ddx1	99	83.696	ENSOARG00000016369	DDX1	100	83.696	Ovis_aries
ENSGAFG00000004706	ddx1	100	83.514	ENSPPAG00000027432	DDX1	100	83.514	Pan_paniscus
ENSGAFG00000004706	ddx1	100	83.784	ENSPPRG00000020556	DDX1	100	83.784	Panthera_pardus
ENSGAFG00000004706	ddx1	100	83.649	ENSPTIG00000008267	DDX1	100	83.649	Panthera_tigris_altaica
ENSGAFG00000004706	ddx1	100	83.514	ENSPTRG00000011670	DDX1	100	83.514	Pan_troglodytes
ENSGAFG00000004706	ddx1	100	83.784	ENSPANG00000025185	DDX1	100	83.784	Papio_anubis
ENSGAFG00000004706	ddx1	100	84.865	ENSPKIG00000012466	ddx1	100	85.014	Paramormyrops_kingsleyae
ENSGAFG00000004706	ddx1	54	81.141	ENSPSIG00000012292	DDX1	100	81.141	Pelodiscus_sinensis
ENSGAFG00000004706	ddx1	100	90.811	ENSPMGG00000000782	ddx1	100	90.811	Periophthalmus_magnuspinnatus
ENSGAFG00000004706	ddx1	100	83.919	ENSPEMG00000016389	Ddx1	100	83.919	Peromyscus_maniculatus_bairdii
ENSGAFG00000004706	ddx1	99	77.310	ENSPMAG00000009118	-	100	77.310	Petromyzon_marinus
ENSGAFG00000004706	ddx1	100	85.541	ENSPCIG00000010941	DDX1	100	85.541	Phascolarctos_cinereus
ENSGAFG00000004706	ddx1	100	97.973	ENSPFOG00000011921	ddx1	100	97.973	Poecilia_formosa
ENSGAFG00000004706	ddx1	86	96.890	ENSPFOG00000006873	-	100	96.890	Poecilia_formosa
ENSGAFG00000004706	ddx1	100	97.703	ENSPLAG00000005939	ddx1	100	97.703	Poecilia_latipinna
ENSGAFG00000004706	ddx1	100	97.973	ENSPMEG00000011140	ddx1	100	97.973	Poecilia_mexicana
ENSGAFG00000004706	ddx1	100	97.703	ENSPREG00000011751	ddx1	100	97.703	Poecilia_reticulata
ENSGAFG00000004706	ddx1	100	83.649	ENSPPYG00000012638	DDX1	100	83.649	Pongo_abelii
ENSGAFG00000004706	ddx1	100	72.162	ENSPCAG00000001491	DDX1	100	72.162	Procavia_capensis
ENSGAFG00000004706	ddx1	99	81.744	ENSPCOG00000028185	DDX1	99	81.744	Propithecus_coquereli
ENSGAFG00000004706	ddx1	100	83.919	ENSPVAG00000013618	DDX1	100	83.919	Pteropus_vampyrus
ENSGAFG00000004706	ddx1	100	92.027	ENSPNYG00000013839	ddx1	100	92.027	Pundamilia_nyererei
ENSGAFG00000004706	ddx1	89	87.786	ENSPNAG00000017033	ddx1	97	87.786	Pygocentrus_nattereri
ENSGAFG00000004706	ddx1	100	83.784	ENSRNOG00000006652	Ddx1	100	83.784	Rattus_norvegicus
ENSGAFG00000004706	ddx1	100	82.838	ENSRBIG00000041664	DDX1	100	83.040	Rhinopithecus_bieti
ENSGAFG00000004706	ddx1	100	83.514	ENSRROG00000031167	DDX1	100	83.514	Rhinopithecus_roxellana
ENSGAFG00000004706	ddx1	100	83.784	ENSSBOG00000027577	DDX1	100	83.784	Saimiri_boliviensis_boliviensis
ENSGAFG00000004706	ddx1	99	77.205	ENSSHAG00000009363	DDX1	99	77.205	Sarcophilus_harrisii
ENSGAFG00000004706	ddx1	100	85.946	ENSSFOG00015014476	ddx1	100	85.946	Scleropages_formosus
ENSGAFG00000004706	ddx1	100	91.622	ENSSMAG00000010094	ddx1	100	91.622	Scophthalmus_maximus
ENSGAFG00000004706	ddx1	100	92.162	ENSSDUG00000012334	ddx1	100	92.162	Seriola_dumerili
ENSGAFG00000004706	ddx1	100	91.622	ENSSLDG00000025345	ddx1	100	91.622	Seriola_lalandi_dorsalis
ENSGAFG00000004706	ddx1	99	76.158	ENSSARG00000004536	DDX1	100	76.158	Sorex_araneus
ENSGAFG00000004706	ddx1	100	83.514	ENSSPUG00000018835	DDX1	100	83.514	Sphenodon_punctatus
ENSGAFG00000004706	ddx1	100	87.027	ENSSPAG00000023554	ddx1	100	87.027	Stegastes_partitus
ENSGAFG00000004706	ddx1	100	83.919	ENSSSCG00000008619	DDX1	100	83.919	Sus_scrofa
ENSGAFG00000004706	ddx1	100	84.595	ENSTGUG00000013096	DDX1	100	84.595	Taeniopygia_guttata
ENSGAFG00000004706	ddx1	99	90.921	ENSTRUG00000015765	ddx1	99	90.921	Takifugu_rubripes
ENSGAFG00000004706	ddx1	100	91.622	ENSTNIG00000016309	ddx1	100	91.622	Tetraodon_nigroviridis
ENSGAFG00000004706	ddx1	99	80.381	ENSTBEG00000008454	DDX1	100	80.381	Tupaia_belangeri
ENSGAFG00000004706	ddx1	100	84.189	ENSTTRG00000005081	DDX1	100	84.189	Tursiops_truncatus
ENSGAFG00000004706	ddx1	63	77.612	ENSUAMG00000017375	DDX1	87	77.612	Ursus_americanus
ENSGAFG00000004706	ddx1	99	83.787	ENSUMAG00000023450	DDX1	100	83.787	Ursus_maritimus
ENSGAFG00000004706	ddx1	85	88.124	ENSVPAG00000007764	DDX1	85	88.124	Vicugna_pacos
ENSGAFG00000004706	ddx1	99	83.946	ENSVVUG00000013085	DDX1	96	83.946	Vulpes_vulpes
ENSGAFG00000004706	ddx1	100	83.784	ENSXETG00000017825	ddx1	100	83.784	Xenopus_tropicalis
ENSGAFG00000004706	ddx1	100	95.448	ENSXCOG00000007082	ddx1	100	95.448	Xiphophorus_couchianus
ENSGAFG00000004706	ddx1	100	98.378	ENSXMAG00000004555	ddx1	100	98.378	Xiphophorus_maculatus