EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004737 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 28983 bases
Position: chrNHOQ01002042.1:105503-134485
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007039	Anticodon_1	PF08264.13	1.1e-34	1	1
ENSGAFP00000007039	tRNA-synt_1	PF00133.22	9.7e-142	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007114	-	2814	-	ENSGAFP00000007039	937 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004737	vars2	91	59.375	ENSGAFG00000021630	vars	66	59.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004737	vars2	92	79.903	ENSAPOG00000007396	vars2	93	79.515	Acanthochromis_polyacanthus
ENSGAFG00000004737	vars2	87	49.110	ENSAMEG00000012997	VARS2	74	49.110	Ailuropoda_melanoleuca
ENSGAFG00000004737	vars2	100	74.160	ENSACIG00000004344	vars2	96	74.160	Amphilophus_citrinellus
ENSGAFG00000004737	vars2	92	79.758	ENSAOCG00000000476	vars2	93	79.758	Amphiprion_ocellaris
ENSGAFG00000004737	vars2	92	79.879	ENSAPEG00000008646	vars2	91	79.879	Amphiprion_percula
ENSGAFG00000004737	vars2	96	78.424	ENSATEG00000012291	vars2	93	78.424	Anabas_testudineus
ENSGAFG00000004737	vars2	91	51.345	ENSACAG00000022093	VARS2	82	51.345	Anolis_carolinensis
ENSGAFG00000004737	vars2	89	48.629	ENSANAG00000038018	VARS2	84	48.629	Aotus_nancymaae
ENSGAFG00000004737	vars2	100	74.545	ENSACLG00000018673	vars2	93	74.545	Astatotilapia_calliptera
ENSGAFG00000004737	vars2	95	67.672	ENSAMXG00000017773	vars2	84	70.649	Astyanax_mexicanus
ENSGAFG00000004737	vars2	89	50.313	ENSBTAG00000010698	VARS2	81	50.313	Bos_taurus
ENSGAFG00000004737	vars2	92	47.339	ENSCJAG00000019826	VARS2	89	47.452	Callithrix_jacchus
ENSGAFG00000004737	vars2	88	51.134	ENSCAFG00000000454	VARS2	72	51.134	Canis_familiaris
ENSGAFG00000004737	vars2	74	55.491	ENSCAFG00020019387	VARS2	69	55.316	Canis_lupus_dingo
ENSGAFG00000004737	vars2	89	50.251	ENSCHIG00000007847	VARS2	85	48.749	Capra_hircus
ENSGAFG00000004737	vars2	92	48.123	ENSTSYG00000009904	VARS2	89	48.123	Carlito_syrichta
ENSGAFG00000004737	vars2	84	50.506	ENSCAPG00000017770	VARS2	82	50.506	Cavia_aperea
ENSGAFG00000004737	vars2	88	50.127	ENSCPOG00000021834	VARS2	80	50.253	Cavia_porcellus
ENSGAFG00000004737	vars2	89	48.391	ENSCCAG00000037907	VARS2	84	48.510	Cebus_capucinus
ENSGAFG00000004737	vars2	92	48.636	ENSCATG00000032554	VARS2	85	48.754	Cercocebus_atys
ENSGAFG00000004737	vars2	92	48.743	ENSCLAG00000002889	VARS2	85	48.743	Chinchilla_lanigera
ENSGAFG00000004737	vars2	92	49.110	ENSCSAG00000008327	VARS2	85	49.229	Chlorocebus_sabaeus
ENSGAFG00000004737	vars2	91	65.714	ENSCPBG00000021502	VARS2	82	65.714	Chrysemys_picta_bellii
ENSGAFG00000004737	vars2	92	48.399	ENSCANG00000014991	VARS2	84	48.517	Colobus_angolensis_palliatus
ENSGAFG00000004737	vars2	88	50.630	ENSCGRG00001021535	Vars2	81	50.630	Cricetulus_griseus_chok1gshd
ENSGAFG00000004737	vars2	88	50.630	ENSCGRG00000014112	Vars2	81	50.630	Cricetulus_griseus_crigri
ENSGAFG00000004737	vars2	86	83.544	ENSCSEG00000015432	vars2	89	83.544	Cynoglossus_semilaevis
ENSGAFG00000004737	vars2	76	85.795	ENSCVAG00000017765	vars2	98	85.795	Cyprinodon_variegatus
ENSGAFG00000004737	vars2	100	66.424	ENSDARG00000056717	vars2	93	66.424	Danio_rerio
ENSGAFG00000004737	vars2	84	50.063	ENSDORG00000008516	Vars2	85	50.063	Dipodomys_ordii
ENSGAFG00000004737	vars2	90	62.500	ENSETEG00000014844	VARS2	77	62.500	Echinops_telfairi
ENSGAFG00000004737	vars2	88	50.000	ENSEASG00005019997	VARS2	89	50.930	Equus_asinus_asinus
ENSGAFG00000004737	vars2	91	48.452	ENSECAG00000018202	VARS2	85	48.452	Equus_caballus
ENSGAFG00000004737	vars2	92	67.590	ENSELUG00000017824	vars2	93	67.590	Esox_lucius
ENSGAFG00000004737	vars2	88	51.204	ENSFCAG00000010531	VARS2	80	51.204	Felis_catus
ENSGAFG00000004737	vars2	89	50.249	ENSFDAG00000017216	VARS2	81	50.249	Fukomys_damarensis
ENSGAFG00000004737	vars2	94	81.569	ENSFHEG00000013932	vars2	92	81.569	Fundulus_heteroclitus
ENSGAFG00000004737	vars2	89	67.506	ENSGMOG00000018960	vars2	90	67.506	Gadus_morhua
ENSGAFG00000004737	vars2	90	75.931	ENSGACG00000001464	vars2	89	75.931	Gasterosteus_aculeatus
ENSGAFG00000004737	vars2	91	50.930	ENSGAGG00000011652	VARS2	94	50.930	Gopherus_agassizii
ENSGAFG00000004737	vars2	92	48.517	ENSGGOG00000014587	VARS2	85	48.636	Gorilla_gorilla
ENSGAFG00000004737	vars2	100	73.333	ENSHBUG00000002448	vars2	93	73.333	Haplochromis_burtoni
ENSGAFG00000004737	vars2	92	48.288	ENSHGLG00000012886	VARS2	83	48.406	Heterocephalus_glaber_female
ENSGAFG00000004737	vars2	92	48.170	ENSHGLG00100016535	VARS2	86	48.288	Heterocephalus_glaber_male
ENSGAFG00000004737	vars2	80	75.100	ENSHCOG00000017907	vars2	99	75.100	Hippocampus_comes
ENSGAFG00000004737	vars2	92	66.546	ENSIPUG00000015573	Vars2	90	66.546	Ictalurus_punctatus
ENSGAFG00000004737	vars2	88	49.027	ENSSTOG00000009924	VARS2	83	49.148	Ictidomys_tridecemlineatus
ENSGAFG00000004737	vars2	89	56.250	ENSJJAG00000011144	Vars2	79	56.250	Jaculus_jaculus
ENSGAFG00000004737	vars2	100	76.747	ENSKMAG00000001393	vars2	93	76.747	Kryptolebias_marmoratus
ENSGAFG00000004737	vars2	99	73.786	ENSLBEG00000011949	vars2	94	73.786	Labrus_bergylta
ENSGAFG00000004737	vars2	95	49.577	ENSLACG00000001576	-	81	60.606	Latimeria_chalumnae
ENSGAFG00000004737	vars2	89	50.249	ENSLAFG00000015183	VARS2	81	50.249	Loxodonta_africana
ENSGAFG00000004737	vars2	92	48.399	ENSMFAG00000042367	VARS2	85	48.517	Macaca_fascicularis
ENSGAFG00000004737	vars2	92	48.517	ENSMMUG00000018609	VARS2	85	48.636	Macaca_mulatta
ENSGAFG00000004737	vars2	92	48.399	ENSMNEG00000043163	VARS2	85	48.517	Macaca_nemestrina
ENSGAFG00000004737	vars2	92	48.754	ENSMLEG00000041728	VARS2	83	48.873	Mandrillus_leucophaeus
ENSGAFG00000004737	vars2	96	76.000	ENSMAMG00000020339	vars2	91	76.000	Mastacembelus_armatus
ENSGAFG00000004737	vars2	100	74.424	ENSMZEG00005017669	vars2	93	74.424	Maylandia_zebra
ENSGAFG00000004737	vars2	89	50.313	ENSMAUG00000018946	Vars2	84	49.281	Mesocricetus_auratus
ENSGAFG00000004737	vars2	75	54.848	ENSMICG00000005365	VARS2	82	54.848	Microcebus_murinus
ENSGAFG00000004737	vars2	89	46.750	ENSMOCG00000014607	Vars2	76	52.474	Microtus_ochrogaster
ENSGAFG00000004737	vars2	92	71.893	ENSMMOG00000012122	vars2	95	71.893	Mola_mola
ENSGAFG00000004737	vars2	88	48.379	ENSMODG00000015848	VARS2	83	48.379	Monodelphis_domestica
ENSGAFG00000004737	vars2	96	75.394	ENSMALG00000009217	vars2	93	75.394	Monopterus_albus
ENSGAFG00000004737	vars2	89	51.069	MGP_CAROLIEiJ_G0021529	Vars2	97	54.404	Mus_caroli
ENSGAFG00000004737	vars2	89	50.627	ENSMUSG00000038838	Vars2	93	55.655	Mus_musculus
ENSGAFG00000004737	vars2	89	50.816	MGP_PahariEiJ_G0020523	Vars2	93	55.476	Mus_pahari
ENSGAFG00000004737	vars2	89	50.692	MGP_SPRETEiJ_G0022436	Vars2	97	54.231	Mus_spretus
ENSGAFG00000004737	vars2	88	51.013	ENSMPUG00000011643	VARS2	81	51.013	Mustela_putorius_furo
ENSGAFG00000004737	vars2	88	49.434	ENSMLUG00000002356	VARS2	78	49.434	Myotis_lucifugus
ENSGAFG00000004737	vars2	89	48.101	ENSNGAG00000020607	Vars2	83	48.101	Nannospalax_galili
ENSGAFG00000004737	vars2	60	62.379	ENSNBRG00000001624	vars2	51	62.379	Neolamprologus_brichardi
ENSGAFG00000004737	vars2	92	48.438	ENSNLEG00000005625	VARS2	82	48.558	Nomascus_leucogenys
ENSGAFG00000004737	vars2	65	50.772	ENSMEUG00000014475	VARS2	66	50.772	Notamacropus_eugenii
ENSGAFG00000004737	vars2	86	46.875	ENSOPRG00000000682	VARS2	72	47.100	Ochotona_princeps
ENSGAFG00000004737	vars2	88	49.683	ENSODEG00000017965	VARS2	80	49.810	Octodon_degus
ENSGAFG00000004737	vars2	92	50.595	ENSONIG00000004734	vars2	90	50.595	Oreochromis_niloticus
ENSGAFG00000004737	vars2	73	44.833	ENSOANG00000000398	-	81	44.833	Ornithorhynchus_anatinus
ENSGAFG00000004737	vars2	88	46.962	ENSOCUG00000021496	VARS2	51	47.342	Oryctolagus_cuniculus
ENSGAFG00000004737	vars2	92	73.212	ENSORLG00000010632	vars2	96	73.212	Oryzias_latipes
ENSGAFG00000004737	vars2	92	73.455	ENSORLG00020018584	vars2	93	73.455	Oryzias_latipes_hni
ENSGAFG00000004737	vars2	92	73.333	ENSORLG00015010408	vars2	93	73.333	Oryzias_latipes_hsok
ENSGAFG00000004737	vars2	92	73.601	ENSOMEG00000008360	vars2	95	73.601	Oryzias_melastigma
ENSGAFG00000004737	vars2	92	49.050	ENSOGAG00000006087	VARS2	83	49.050	Otolemur_garnettii
ENSGAFG00000004737	vars2	89	49.750	ENSOARG00000010844	VARS2	84	48.280	Ovis_aries
ENSGAFG00000004737	vars2	92	48.517	ENSPPAG00000041141	VARS2	85	48.517	Pan_paniscus
ENSGAFG00000004737	vars2	88	51.134	ENSPPRG00000006751	VARS2	78	51.134	Panthera_pardus
ENSGAFG00000004737	vars2	88	51.008	ENSPTIG00000017799	VARS2	84	50.882	Panthera_tigris_altaica
ENSGAFG00000004737	vars2	92	48.517	ENSPTRG00000034497	VARS2	85	48.517	Pan_troglodytes
ENSGAFG00000004737	vars2	92	48.754	ENSPANG00000018481	VARS2	85	48.873	Papio_anubis
ENSGAFG00000004737	vars2	96	64.763	ENSPKIG00000011372	vars2	89	64.763	Paramormyrops_kingsleyae
ENSGAFG00000004737	vars2	59	59.928	ENSPSIG00000006206	VARS2	81	59.683	Pelodiscus_sinensis
ENSGAFG00000004737	vars2	96	69.576	ENSPMGG00000000465	vars2	90	69.576	Periophthalmus_magnuspinnatus
ENSGAFG00000004737	vars2	89	50.000	ENSPEMG00000014691	Vars2	81	50.000	Peromyscus_maniculatus_bairdii
ENSGAFG00000004737	vars2	92	47.691	ENSPCIG00000015040	VARS2	85	47.691	Phascolarctos_cinereus
ENSGAFG00000004737	vars2	97	88.996	ENSPFOG00000017616	vars2	90	88.996	Poecilia_formosa
ENSGAFG00000004737	vars2	100	89.939	ENSPLAG00000019778	vars2	93	89.939	Poecilia_latipinna
ENSGAFG00000004737	vars2	100	89.697	ENSPMEG00000011123	vars2	93	89.697	Poecilia_mexicana
ENSGAFG00000004737	vars2	98	87.422	ENSPREG00000014998	vars2	95	87.422	Poecilia_reticulata
ENSGAFG00000004737	vars2	92	48.391	ENSPPYG00000016424	VARS2	85	48.510	Pongo_abelii
ENSGAFG00000004737	vars2	65	61.290	ENSPCAG00000006946	VARS2	57	61.290	Procavia_capensis
ENSGAFG00000004737	vars2	91	47.146	ENSPCOG00000014839	VARS2	85	47.146	Propithecus_coquereli
ENSGAFG00000004737	vars2	89	49.626	ENSPVAG00000004197	VARS2	81	49.626	Pteropus_vampyrus
ENSGAFG00000004737	vars2	86	75.229	ENSPNYG00000010314	vars2	91	75.229	Pundamilia_nyererei
ENSGAFG00000004737	vars2	95	67.231	ENSPNAG00000026793	vars2	85	67.231	Pygocentrus_nattereri
ENSGAFG00000004737	vars2	91	49.817	ENSRNOG00000000833	Vars2	83	49.817	Rattus_norvegicus
ENSGAFG00000004737	vars2	92	48.517	ENSRBIG00000032725	VARS2	85	48.636	Rhinopithecus_bieti
ENSGAFG00000004737	vars2	92	48.399	ENSRROG00000043847	VARS2	85	48.517	Rhinopithecus_roxellana
ENSGAFG00000004737	vars2	89	47.387	ENSSBOG00000033240	VARS2	83	47.387	Saimiri_boliviensis_boliviensis
ENSGAFG00000004737	vars2	86	54.366	ENSSHAG00000009307	VARS2	82	54.366	Sarcophilus_harrisii
ENSGAFG00000004737	vars2	97	65.614	ENSSFOG00015016187	vars2	89	65.614	Scleropages_formosus
ENSGAFG00000004737	vars2	100	76.127	ENSSMAG00000020842	vars2	92	76.127	Scophthalmus_maximus
ENSGAFG00000004737	vars2	92	78.909	ENSSDUG00000011598	vars2	93	78.909	Seriola_dumerili
ENSGAFG00000004737	vars2	96	77.576	ENSSLDG00000015492	vars2	93	77.576	Seriola_lalandi_dorsalis
ENSGAFG00000004737	vars2	50	55.128	ENSSARG00000003786	-	52	55.128	Sorex_araneus
ENSGAFG00000004737	vars2	80	56.115	ENSSPUG00000014700	VARS2	81	56.115	Sphenodon_punctatus
ENSGAFG00000004737	vars2	100	75.758	ENSSPAG00000004654	vars2	93	75.758	Stegastes_partitus
ENSGAFG00000004737	vars2	92	49.348	ENSSSCG00000001384	VARS2	84	51.933	Sus_scrofa
ENSGAFG00000004737	vars2	92	71.359	ENSTRUG00000005264	vars2	94	71.359	Takifugu_rubripes
ENSGAFG00000004737	vars2	97	67.273	ENSTNIG00000005916	vars2	91	67.636	Tetraodon_nigroviridis
ENSGAFG00000004737	vars2	79	49.005	ENSTTRG00000012243	VARS2	70	49.158	Tursiops_truncatus
ENSGAFG00000004737	vars2	88	50.440	ENSUAMG00000026124	VARS2	83	50.504	Ursus_americanus
ENSGAFG00000004737	vars2	88	50.504	ENSUMAG00000019894	VARS2	81	50.504	Ursus_maritimus
ENSGAFG00000004737	vars2	84	51.134	ENSVVUG00000010754	VARS2	76	51.134	Vulpes_vulpes
ENSGAFG00000004737	vars2	88	50.065	ENSXETG00000003036	vars2	86	50.065	Xenopus_tropicalis
ENSGAFG00000004737	vars2	98	95.173	ENSXCOG00000003455	vars2	94	95.173	Xiphophorus_couchianus
ENSGAFG00000004737	vars2	100	95.515	ENSXMAG00000013523	vars2	93	95.515	Xiphophorus_maculatus