EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004817 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 413 bases
Position: chrNHOQ01002850.1:3087918-3088330
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007079	RRM_1	PF00076.22	9.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007154	-	276	-	ENSGAFP00000007079	91 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004817	-	82	33.766	ENSGAFG00000019917	rbmx	67	33.333
ENSGAFG00000004817	-	93	30.682	ENSGAFG00000010998	slirp	58	34.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004817	-	96	62.069	ENSG00000106344	RBM28	55	41.964	Homo_sapiens
ENSGAFG00000004817	-	85	83.117	ENSACIG00000023163	-	87	83.117	Amphilophus_citrinellus
ENSGAFG00000004817	-	96	58.621	ENSAMXG00000043026	-	77	61.333	Astyanax_mexicanus
ENSGAFG00000004817	-	96	62.069	ENSDORG00000028147	-	60	60.256	Dipodomys_ordii
ENSGAFG00000004817	-	66	93.333	ENSFHEG00000007895	-	63	93.333	Fundulus_heteroclitus
ENSGAFG00000004817	-	90	65.854	ENSIPUG00000007127	-	74	67.123	Ictalurus_punctatus
ENSGAFG00000004817	-	99	74.444	ENSMMOG00000008605	-	73	74.444	Mola_mola
ENSGAFG00000004817	-	97	78.409	ENSNBRG00000022844	-	77	84.416	Neolamprologus_brichardi
ENSGAFG00000004817	-	86	65.385	ENSPNAG00000022784	-	81	65.385	Pygocentrus_nattereri
ENSGAFG00000004817	-	100	76.923	ENSSMAG00000003917	-	83	76.923	Scophthalmus_maximus
ENSGAFG00000004817	-	98	78.652	ENSSDUG00000014292	-	88	78.652	Seriola_dumerili
ENSGAFG00000004817	-	100	92.308	ENSXCOG00000020358	-	100	92.308	Xiphophorus_couchianus