EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004846 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6529 bases
Position: chrNHOQ01001904.1:2907658-2914186
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007145	MMR_HSR1	PF01926.23	4.5e-06	1	1
ENSGAFP00000007138	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007213	-	360	-	ENSGAFP00000007138	119 (aa)	-	-
ENSGAFT00000007221	-	3274	-	ENSGAFP00000007145	198 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004846	-	91	30.387	ENSGAFG00000010799	arf2b	93	30.387
ENSGAFG00000004846	-	98	84.615	ENSGAFG00000007081	sar1b	100	81.818
ENSGAFG00000004846	-	78	33.333	ENSGAFG00000002547	arl5c	51	33.696
ENSGAFG00000004846	-	92	30.000	ENSGAFG00000005872	arl3	59	30.000
ENSGAFG00000004846	-	80	31.250	ENSGAFG00000017776	arl8a	72	35.772
ENSGAFG00000004846	-	90	30.168	ENSGAFG00000006973	arl1	100	30.168
ENSGAFG00000004846	-	87	31.429	ENSGAFG00000005163	-	89	31.429
ENSGAFG00000004846	-	79	31.579	ENSGAFG00000010938	arl8ba	75	34.483
ENSGAFG00000004846	-	87	30.460	ENSGAFG00000018703	arf5	89	30.460
ENSGAFG00000004846	-	89	33.019	ENSGAFG00000015025	arl2	78	34.722
ENSGAFG00000004846	-	82	30.769	ENSGAFG00000011077	-	90	32.704
ENSGAFG00000004846	-	74	40.860	ENSGAFG00000014283	arl4aa	58	40.870
ENSGAFG00000004846	-	91	30.435	ENSGAFG00000012355	ARL6	92	30.435
ENSGAFG00000004846	-	100	79.798	ENSGAFG00000009702	sar1ab	100	79.798
ENSGAFG00000004846	-	78	34.409	ENSGAFG00000009954	-	54	33.884
ENSGAFG00000004846	-	97	30.412	ENSGAFG00000008497	arl8bb	93	30.412
ENSGAFG00000004846	-	91	30.939	ENSGAFG00000018151	-	94	30.939
ENSGAFG00000004846	-	69	33.735	ENSGAFG00000010573	-	61	31.068
ENSGAFG00000004846	-	85	33.918	ENSGAFG00000012819	-	82	33.918
ENSGAFG00000004846	-	91	30.645	ENSGAFG00000021449	-	96	30.645
ENSGAFG00000004846	-	84	31.548	ENSGAFG00000000058	arl11	98	31.548
ENSGAFG00000004846	-	74	39.785	ENSGAFG00000020556	arl4cb	68	35.115
ENSGAFG00000004846	-	91	33.945	ENSGAFG00000008601	arl3l2	67	35.664
ENSGAFG00000004846	-	78	34.409	ENSGAFG00000021727	arf3b	67	33.884
ENSGAFG00000004846	-	75	34.831	ENSGAFG00000002801	-	83	35.106
ENSGAFG00000004846	-	86	32.386	ENSGAFG00000012473	arl4d	82	32.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004846	-	98	80.342	ENSACIG00000019827	sar1ab	100	78.283	Amphilophus_citrinellus
ENSGAFG00000004846	-	100	79.798	ENSAOCG00000022062	sar1ab	100	79.798	Amphiprion_ocellaris
ENSGAFG00000004846	-	100	79.798	ENSAPEG00000011525	sar1ab	100	79.798	Amphiprion_percula
ENSGAFG00000004846	-	100	82.828	ENSATEG00000003466	sar1ab	100	82.828	Anabas_testudineus
ENSGAFG00000004846	-	98	81.197	ENSACLG00000013053	sar1ab	100	77.273	Astatotilapia_calliptera
ENSGAFG00000004846	-	100	83.333	ENSCSEG00000004825	sar1ab	100	83.333	Cynoglossus_semilaevis
ENSGAFG00000004846	-	100	94.949	ENSCVAG00000006500	-	100	94.949	Cyprinodon_variegatus
ENSGAFG00000004846	-	100	79.798	ENSCVAG00000015162	sar1ab	100	79.798	Cyprinodon_variegatus
ENSGAFG00000004846	-	100	81.818	ENSDARG00000033320	sar1ab	100	81.818	Danio_rerio
ENSGAFG00000004846	-	100	88.384	ENSELUG00000013652	sar1a	100	88.384	Esox_lucius
ENSGAFG00000004846	-	100	81.818	ENSELUG00000024279	sar1ab	100	81.818	Esox_lucius
ENSGAFG00000004846	-	100	97.475	ENSFHEG00000012352	-	100	97.475	Fundulus_heteroclitus
ENSGAFG00000004846	-	100	80.808	ENSFHEG00000021773	sar1ab	100	80.808	Fundulus_heteroclitus
ENSGAFG00000004846	-	100	80.303	ENSGMOG00000012588	sar1ab	100	80.303	Gadus_morhua
ENSGAFG00000004846	-	100	81.818	ENSGACG00000008616	sar1ab	100	81.818	Gasterosteus_aculeatus
ENSGAFG00000004846	-	98	81.197	ENSHBUG00000021221	sar1ab	100	77.778	Haplochromis_burtoni
ENSGAFG00000004846	-	100	80.303	ENSHCOG00000002845	sar1ab	80	80.303	Hippocampus_comes
ENSGAFG00000004846	-	100	78.788	ENSKMAG00000018006	sar1ab	100	78.788	Kryptolebias_marmoratus
ENSGAFG00000004846	-	97	86.087	ENSLBEG00000001114	sar1ab	100	82.323	Labrus_bergylta
ENSGAFG00000004846	-	100	82.323	ENSMAMG00000021314	sar1ab	100	82.323	Mastacembelus_armatus
ENSGAFG00000004846	-	98	81.197	ENSMZEG00005027606	sar1ab	100	77.273	Maylandia_zebra
ENSGAFG00000004846	-	98	84.615	ENSMMOG00000010360	sar1ab	100	82.323	Mola_mola
ENSGAFG00000004846	-	98	83.761	ENSMALG00000005831	sar1ab	100	80.303	Monopterus_albus
ENSGAFG00000004846	-	98	81.197	ENSNBRG00000018772	sar1ab	100	77.778	Neolamprologus_brichardi
ENSGAFG00000004846	-	98	81.197	ENSONIG00000018509	sar1ab	100	78.788	Oreochromis_niloticus
ENSGAFG00000004846	-	100	81.818	ENSORLG00000006779	sar1ab	67	81.818	Oryzias_latipes
ENSGAFG00000004846	-	100	89.394	ENSORLG00000009132	-	90	89.394	Oryzias_latipes
ENSGAFG00000004846	-	100	89.394	ENSORLG00020007024	-	90	89.394	Oryzias_latipes_hni
ENSGAFG00000004846	-	100	82.323	ENSORLG00020005458	sar1ab	100	82.323	Oryzias_latipes_hni
ENSGAFG00000004846	-	100	81.818	ENSORLG00015010542	sar1ab	100	81.818	Oryzias_latipes_hsok
ENSGAFG00000004846	-	100	88.889	ENSORLG00015006223	-	94	92.857	Oryzias_latipes_hsok
ENSGAFG00000004846	-	100	88.889	ENSOMEG00000012020	-	100	88.889	Oryzias_melastigma
ENSGAFG00000004846	-	100	81.313	ENSOMEG00000004948	sar1ab	100	81.313	Oryzias_melastigma
ENSGAFG00000004846	-	98	86.325	ENSPKIG00000007615	sar1ab	100	82.828	Paramormyrops_kingsleyae
ENSGAFG00000004846	-	100	82.828	ENSPMGG00000013330	sar1ab	100	82.828	Periophthalmus_magnuspinnatus
ENSGAFG00000004846	-	100	80.303	ENSPFOG00000023432	sar1ab	100	80.303	Poecilia_formosa
ENSGAFG00000004846	-	100	80.808	ENSPLAG00000023705	sar1ab	100	80.808	Poecilia_latipinna
ENSGAFG00000004846	-	100	97.980	ENSPMEG00000001717	-	100	97.980	Poecilia_mexicana
ENSGAFG00000004846	-	100	80.303	ENSPMEG00000000559	sar1ab	100	80.303	Poecilia_mexicana
ENSGAFG00000004846	-	100	80.303	ENSPREG00000016098	sar1ab	100	80.303	Poecilia_reticulata
ENSGAFG00000004846	-	98	81.197	ENSPNYG00000011603	sar1ab	100	77.778	Pundamilia_nyererei
ENSGAFG00000004846	-	100	82.323	ENSPNAG00000008007	sar1ab	100	82.323	Pygocentrus_nattereri
ENSGAFG00000004846	-	100	86.364	ENSSFOG00015014010	sar1a	100	86.364	Scleropages_formosus
ENSGAFG00000004846	-	93	87.387	ENSSMAG00000020758	sar1ab	83	85.217	Scophthalmus_maximus
ENSGAFG00000004846	-	97	85.217	ENSSDUG00000010773	sar1ab	100	81.818	Seriola_dumerili
ENSGAFG00000004846	-	97	85.217	ENSSLDG00000025558	sar1ab	100	81.818	Seriola_lalandi_dorsalis
ENSGAFG00000004846	-	100	80.303	ENSSPAG00000009194	sar1ab	100	80.303	Stegastes_partitus
ENSGAFG00000004846	-	98	83.761	ENSTRUG00000007269	sar1ab	100	80.303	Takifugu_rubripes
ENSGAFG00000004846	-	98	82.906	ENSTNIG00000008635	sar1ab	100	79.293	Tetraodon_nigroviridis
ENSGAFG00000004846	-	100	80.303	ENSXMAG00000003130	sar1ab	100	80.303	Xiphophorus_maculatus
ENSGAFG00000004846	-	100	99.160	ENSXMAG00000026223	SAR1A	100	99.160	Xiphophorus_maculatus