EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000004850 (Gene tree)
Gene ID: -
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4954 bases
Position: chrNHOQ01000158.1:96456-101409
Accession: ZDB-GENE-050522-251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007128	RNA_pol_I_A49	PF06870.12	6.2e-116	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007203	-	1552	-	ENSGAFP00000007128	415 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004850	polr1e	98	43.137	ENSG00000137054	POLR1E	97	43.137	Homo_sapiens
ENSGAFG00000004850	polr1e	100	68.750	ENSAPOG00000012452	polr1e	100	68.750	Acanthochromis_polyacanthus
ENSGAFG00000004850	polr1e	98	40.308	ENSAMEG00000010193	POLR1E	94	40.308	Ailuropoda_melanoleuca
ENSGAFG00000004850	polr1e	100	64.833	ENSACIG00000009884	polr1e	99	68.367	Amphilophus_citrinellus
ENSGAFG00000004850	polr1e	100	74.760	ENSAOCG00000005665	polr1e	100	74.760	Amphiprion_ocellaris
ENSGAFG00000004850	polr1e	100	75.240	ENSAPEG00000020581	polr1e	100	75.240	Amphiprion_percula
ENSGAFG00000004850	polr1e	100	74.279	ENSATEG00000020609	polr1e	100	74.279	Anabas_testudineus
ENSGAFG00000004850	polr1e	81	37.143	ENSAPLG00000010340	POLR1E	100	37.275	Anas_platyrhynchos
ENSGAFG00000004850	polr1e	99	43.478	ENSANAG00000038046	POLR1E	98	43.478	Aotus_nancymaae
ENSGAFG00000004850	polr1e	100	72.596	ENSACLG00000013685	polr1e	99	72.596	Astatotilapia_calliptera
ENSGAFG00000004850	polr1e	99	55.072	ENSAMXG00000018181	polr1e	99	55.072	Astyanax_mexicanus
ENSGAFG00000004850	polr1e	98	46.324	ENSBTAG00000012243	POLR1E	97	46.324	Bos_taurus
ENSGAFG00000004850	polr1e	95	41.855	ENSCJAG00000010512	POLR1E	92	44.986	Callithrix_jacchus
ENSGAFG00000004850	polr1e	99	43.478	ENSCAFG00000002377	POLR1E	98	43.478	Canis_familiaris
ENSGAFG00000004850	polr1e	99	43.237	ENSCAFG00020017851	POLR1E	98	43.237	Canis_lupus_dingo
ENSGAFG00000004850	polr1e	98	45.833	ENSCHIG00000019479	POLR1E	97	45.833	Capra_hircus
ENSGAFG00000004850	polr1e	99	43.478	ENSTSYG00000002075	POLR1E	98	43.478	Carlito_syrichta
ENSGAFG00000004850	polr1e	70	40.550	ENSCAPG00000015653	POLR1E	99	40.550	Cavia_aperea
ENSGAFG00000004850	polr1e	98	43.627	ENSCPOG00000009965	POLR1E	97	43.627	Cavia_porcellus
ENSGAFG00000004850	polr1e	99	39.320	ENSCCAG00000029460	POLR1E	98	39.320	Cebus_capucinus
ENSGAFG00000004850	polr1e	98	43.382	ENSCATG00000031732	POLR1E	96	53.846	Cercocebus_atys
ENSGAFG00000004850	polr1e	87	46.133	ENSCLAG00000012701	POLR1E	95	46.133	Chinchilla_lanigera
ENSGAFG00000004850	polr1e	98	43.627	ENSCSAG00000010782	POLR1E	97	43.627	Chlorocebus_sabaeus
ENSGAFG00000004850	polr1e	95	37.343	ENSCHOG00000013024	POLR1E	82	37.343	Choloepus_hoffmanni
ENSGAFG00000004850	polr1e	99	44.391	ENSCPBG00000006923	POLR1E	99	44.391	Chrysemys_picta_bellii
ENSGAFG00000004850	polr1e	98	43.765	ENSCANG00000036112	POLR1E	96	55.769	Colobus_angolensis_palliatus
ENSGAFG00000004850	polr1e	99	41.687	ENSCGRG00001006197	Polr1e	95	41.687	Cricetulus_griseus_chok1gshd
ENSGAFG00000004850	polr1e	99	41.205	ENSCGRG00000006430	Polr1e	95	41.205	Cricetulus_griseus_crigri
ENSGAFG00000004850	polr1e	99	67.633	ENSCSEG00000005121	polr1e	99	67.633	Cynoglossus_semilaevis
ENSGAFG00000004850	polr1e	100	82.892	ENSCVAG00000019759	polr1e	100	82.892	Cyprinodon_variegatus
ENSGAFG00000004850	polr1e	97	55.335	ENSDARG00000006434	polr1e	100	54.940	Danio_rerio
ENSGAFG00000004850	polr1e	99	36.632	ENSDNOG00000010257	POLR1E	99	36.632	Dasypus_novemcinctus
ENSGAFG00000004850	polr1e	83	42.407	ENSETEG00000018204	POLR1E	96	42.571	Echinops_telfairi
ENSGAFG00000004850	polr1e	99	43.720	ENSEASG00005000675	POLR1E	98	43.720	Equus_asinus_asinus
ENSGAFG00000004850	polr1e	99	43.720	ENSECAG00000014669	POLR1E	98	43.720	Equus_caballus
ENSGAFG00000004850	polr1e	95	38.791	ENSEEUG00000011928	POLR1E	84	38.791	Erinaceus_europaeus
ENSGAFG00000004850	polr1e	99	66.425	ENSELUG00000008150	polr1e	99	66.425	Esox_lucius
ENSGAFG00000004850	polr1e	99	43.614	ENSFCAG00000013081	POLR1E	98	43.614	Felis_catus
ENSGAFG00000004850	polr1e	95	41.709	ENSFALG00000012950	POLR1E	99	41.709	Ficedula_albicollis
ENSGAFG00000004850	polr1e	98	46.715	ENSFDAG00000016917	POLR1E	97	46.715	Fukomys_damarensis
ENSGAFG00000004850	polr1e	100	82.933	ENSFHEG00000009801	polr1e	100	82.933	Fundulus_heteroclitus
ENSGAFG00000004850	polr1e	99	53.222	ENSGMOG00000003336	POLR1E	99	53.222	Gadus_morhua
ENSGAFG00000004850	polr1e	99	42.548	ENSGALG00000005395	POLR1E	99	42.548	Gallus_gallus
ENSGAFG00000004850	polr1e	100	68.258	ENSGACG00000016087	polr1e	100	68.258	Gasterosteus_aculeatus
ENSGAFG00000004850	polr1e	97	41.176	ENSGAGG00000001659	POLR1E	99	40.909	Gopherus_agassizii
ENSGAFG00000004850	polr1e	99	42.686	ENSGGOG00000001882	POLR1E	98	51.327	Gorilla_gorilla
ENSGAFG00000004850	polr1e	100	72.837	ENSHBUG00000002559	polr1e	99	72.837	Haplochromis_burtoni
ENSGAFG00000004850	polr1e	98	46.341	ENSHGLG00000002036	POLR1E	97	46.341	Heterocephalus_glaber_female
ENSGAFG00000004850	polr1e	98	46.585	ENSHGLG00100012784	POLR1E	97	46.585	Heterocephalus_glaber_male
ENSGAFG00000004850	polr1e	100	67.952	ENSHCOG00000002774	polr1e	100	67.952	Hippocampus_comes
ENSGAFG00000004850	polr1e	99	54.106	ENSIPUG00000003019	polr1e	99	54.106	Ictalurus_punctatus
ENSGAFG00000004850	polr1e	99	43.961	ENSSTOG00000009810	POLR1E	99	43.961	Ictidomys_tridecemlineatus
ENSGAFG00000004850	polr1e	98	44.417	ENSJJAG00000020731	Polr1e	93	44.417	Jaculus_jaculus
ENSGAFG00000004850	polr1e	100	78.125	ENSKMAG00000000046	polr1e	100	78.125	Kryptolebias_marmoratus
ENSGAFG00000004850	polr1e	99	72.771	ENSLBEG00000003104	polr1e	99	72.771	Labrus_bergylta
ENSGAFG00000004850	polr1e	86	49.862	ENSLACG00000003416	POLR1E	99	49.862	Latimeria_chalumnae
ENSGAFG00000004850	polr1e	99	52.038	ENSLOCG00000012859	polr1e	99	52.038	Lepisosteus_oculatus
ENSGAFG00000004850	polr1e	99	44.976	ENSLAFG00000012831	POLR1E	98	44.976	Loxodonta_africana
ENSGAFG00000004850	polr1e	98	43.382	ENSMFAG00000045465	POLR1E	96	53.846	Macaca_fascicularis
ENSGAFG00000004850	polr1e	98	43.382	ENSMMUG00000017892	POLR1E	96	53.846	Macaca_mulatta
ENSGAFG00000004850	polr1e	98	39.474	ENSMNEG00000040283	POLR1E	94	45.455	Macaca_nemestrina
ENSGAFG00000004850	polr1e	98	43.382	ENSMLEG00000031135	POLR1E	96	53.846	Mandrillus_leucophaeus
ENSGAFG00000004850	polr1e	99	74.458	ENSMAMG00000001260	polr1e	99	74.458	Mastacembelus_armatus
ENSGAFG00000004850	polr1e	100	72.596	ENSMZEG00005021536	polr1e	99	72.596	Maylandia_zebra
ENSGAFG00000004850	polr1e	98	42.647	ENSMAUG00000021044	Polr1e	93	42.647	Mesocricetus_auratus
ENSGAFG00000004850	polr1e	99	44.231	ENSMICG00000003673	POLR1E	98	44.231	Microcebus_murinus
ENSGAFG00000004850	polr1e	98	41.565	ENSMOCG00000012920	Polr1e	94	41.565	Microtus_ochrogaster
ENSGAFG00000004850	polr1e	100	71.223	ENSMMOG00000007391	polr1e	100	71.223	Mola_mola
ENSGAFG00000004850	polr1e	96	44.030	ENSMODG00000002884	POLR1E	98	44.030	Monodelphis_domestica
ENSGAFG00000004850	polr1e	100	74.760	ENSMALG00000002665	polr1e	99	74.760	Monopterus_albus
ENSGAFG00000004850	polr1e	99	41.546	MGP_CAROLIEiJ_G0025967	Polr1e	97	41.919	Mus_caroli
ENSGAFG00000004850	polr1e	99	41.928	ENSMUSG00000028318	Polr1e	97	42.317	Mus_musculus
ENSGAFG00000004850	polr1e	99	42.959	MGP_PahariEiJ_G0024114	Polr1e	97	43.392	Mus_pahari
ENSGAFG00000004850	polr1e	99	41.928	MGP_SPRETEiJ_G0026930	Polr1e	97	42.317	Mus_spretus
ENSGAFG00000004850	polr1e	99	39.440	ENSMPUG00000006040	POLR1E	98	36.989	Mustela_putorius_furo
ENSGAFG00000004850	polr1e	99	45.169	ENSMLUG00000012688	POLR1E	95	45.169	Myotis_lucifugus
ENSGAFG00000004850	polr1e	98	44.608	ENSNGAG00000002520	Polr1e	93	44.608	Nannospalax_galili
ENSGAFG00000004850	polr1e	100	73.077	ENSNBRG00000016822	polr1e	99	73.077	Neolamprologus_brichardi
ENSGAFG00000004850	polr1e	98	43.137	ENSNLEG00000003616	POLR1E	96	53.846	Nomascus_leucogenys
ENSGAFG00000004850	polr1e	73	48.889	ENSMEUG00000015372	-	59	48.889	Notamacropus_eugenii
ENSGAFG00000004850	polr1e	86	38.611	ENSOPRG00000014206	POLR1E	99	38.611	Ochotona_princeps
ENSGAFG00000004850	polr1e	98	46.210	ENSODEG00000014565	POLR1E	94	46.210	Octodon_degus
ENSGAFG00000004850	polr1e	100	72.837	ENSONIG00000008921	polr1e	99	72.837	Oreochromis_niloticus
ENSGAFG00000004850	polr1e	99	43.405	ENSOCUG00000024773	POLR1E	98	43.405	Oryctolagus_cuniculus
ENSGAFG00000004850	polr1e	100	71.394	ENSORLG00000005143	polr1e	100	71.394	Oryzias_latipes
ENSGAFG00000004850	polr1e	93	67.959	ENSORLG00020007271	polr1e	99	67.959	Oryzias_latipes_hni
ENSGAFG00000004850	polr1e	100	71.394	ENSORLG00015000137	polr1e	100	71.394	Oryzias_latipes_hsok
ENSGAFG00000004850	polr1e	100	69.712	ENSOMEG00000013264	polr1e	98	69.712	Oryzias_melastigma
ENSGAFG00000004850	polr1e	99	43.478	ENSOGAG00000012981	POLR1E	96	43.478	Otolemur_garnettii
ENSGAFG00000004850	polr1e	98	46.078	ENSOARG00000011465	POLR1E	93	46.078	Ovis_aries
ENSGAFG00000004850	polr1e	98	43.137	ENSPPAG00000034566	POLR1E	96	53.846	Pan_paniscus
ENSGAFG00000004850	polr1e	99	43.614	ENSPPRG00000005649	POLR1E	98	43.614	Panthera_pardus
ENSGAFG00000004850	polr1e	99	43.614	ENSPTIG00000009774	POLR1E	98	43.614	Panthera_tigris_altaica
ENSGAFG00000004850	polr1e	98	43.137	ENSPTRG00000020944	POLR1E	96	53.846	Pan_troglodytes
ENSGAFG00000004850	polr1e	98	43.382	ENSPANG00000025563	POLR1E	96	53.846	Papio_anubis
ENSGAFG00000004850	polr1e	99	58.629	ENSPKIG00000003562	polr1e	99	58.629	Paramormyrops_kingsleyae
ENSGAFG00000004850	polr1e	98	42.787	ENSPSIG00000003274	POLR1E	95	42.787	Pelodiscus_sinensis
ENSGAFG00000004850	polr1e	95	64.213	ENSPMGG00000024169	polr1e	95	64.213	Periophthalmus_magnuspinnatus
ENSGAFG00000004850	polr1e	99	41.546	ENSPEMG00000019151	-	95	41.546	Peromyscus_maniculatus_bairdii
ENSGAFG00000004850	polr1e	99	35.280	ENSPEMG00000022300	-	94	35.280	Peromyscus_maniculatus_bairdii
ENSGAFG00000004850	polr1e	96	45.025	ENSPCIG00000014798	POLR1E	98	45.025	Phascolarctos_cinereus
ENSGAFG00000004850	polr1e	100	85.488	ENSPFOG00000019627	polr1e	99	85.488	Poecilia_formosa
ENSGAFG00000004850	polr1e	100	90.602	ENSPLAG00000022679	polr1e	100	90.602	Poecilia_latipinna
ENSGAFG00000004850	polr1e	87	91.365	ENSPMEG00000022123	polr1e	93	91.365	Poecilia_mexicana
ENSGAFG00000004850	polr1e	100	90.361	ENSPREG00000009470	polr1e	100	90.361	Poecilia_reticulata
ENSGAFG00000004850	polr1e	98	43.627	ENSPPYG00000019061	POLR1E	97	43.627	Pongo_abelii
ENSGAFG00000004850	polr1e	53	37.946	ENSPCAG00000004891	POLR1E	72	37.946	Procavia_capensis
ENSGAFG00000004850	polr1e	99	43.750	ENSPCOG00000027448	POLR1E	98	43.750	Propithecus_coquereli
ENSGAFG00000004850	polr1e	95	44.192	ENSPVAG00000007940	POLR1E	83	44.192	Pteropus_vampyrus
ENSGAFG00000004850	polr1e	100	72.837	ENSPNYG00000001032	polr1e	99	72.837	Pundamilia_nyererei
ENSGAFG00000004850	polr1e	99	54.940	ENSPNAG00000006987	polr1e	99	54.940	Pygocentrus_nattereri
ENSGAFG00000004850	polr1e	98	42.298	ENSRNOG00000012664	Polr1e	93	42.298	Rattus_norvegicus
ENSGAFG00000004850	polr1e	95	43.687	ENSRBIG00000034214	POLR1E	99	44.094	Rhinopithecus_bieti
ENSGAFG00000004850	polr1e	98	43.382	ENSRROG00000031986	POLR1E	96	53.846	Rhinopithecus_roxellana
ENSGAFG00000004850	polr1e	98	43.627	ENSSBOG00000021415	POLR1E	97	43.627	Saimiri_boliviensis_boliviensis
ENSGAFG00000004850	polr1e	82	43.478	ENSSHAG00000016084	POLR1E	95	43.478	Sarcophilus_harrisii
ENSGAFG00000004850	polr1e	99	59.233	ENSSFOG00015002293	polr1e	99	59.233	Scleropages_formosus
ENSGAFG00000004850	polr1e	99	72.705	ENSSMAG00000011672	polr1e	93	72.705	Scophthalmus_maximus
ENSGAFG00000004850	polr1e	100	74.038	ENSSDUG00000022279	polr1e	99	74.038	Seriola_dumerili
ENSGAFG00000004850	polr1e	100	74.038	ENSSLDG00000024918	polr1e	99	74.038	Seriola_lalandi_dorsalis
ENSGAFG00000004850	polr1e	56	37.500	ENSSARG00000009810	-	58	37.500	Sorex_araneus
ENSGAFG00000004850	polr1e	100	44.048	ENSSPUG00000009499	POLR1E	100	44.048	Sphenodon_punctatus
ENSGAFG00000004850	polr1e	100	75.904	ENSSPAG00000021240	polr1e	100	75.904	Stegastes_partitus
ENSGAFG00000004850	polr1e	99	44.203	ENSSSCG00000005347	POLR1E	98	44.203	Sus_scrofa
ENSGAFG00000004850	polr1e	95	36.830	ENSTGUG00000007169	POLR1E	100	36.830	Taeniopygia_guttata
ENSGAFG00000004850	polr1e	99	66.986	ENSTRUG00000020779	polr1e	99	66.986	Takifugu_rubripes
ENSGAFG00000004850	polr1e	99	69.231	ENSTNIG00000017812	polr1e	99	69.231	Tetraodon_nigroviridis
ENSGAFG00000004850	polr1e	95	45.226	ENSTBEG00000013786	POLR1E	84	45.226	Tupaia_belangeri
ENSGAFG00000004850	polr1e	95	44.140	ENSTTRG00000008294	POLR1E	84	44.140	Tursiops_truncatus
ENSGAFG00000004850	polr1e	99	44.444	ENSUAMG00000012474	POLR1E	98	46.518	Ursus_americanus
ENSGAFG00000004850	polr1e	99	44.444	ENSUMAG00000011496	POLR1E	98	44.444	Ursus_maritimus
ENSGAFG00000004850	polr1e	81	40.762	ENSVPAG00000009048	POLR1E	81	40.762	Vicugna_pacos
ENSGAFG00000004850	polr1e	98	43.627	ENSVVUG00000019954	POLR1E	97	43.627	Vulpes_vulpes
ENSGAFG00000004850	polr1e	99	43.333	ENSXETG00000006533	polr1e	99	43.333	Xenopus_tropicalis
ENSGAFG00000004850	polr1e	100	86.779	ENSXCOG00000013706	polr1e	100	86.779	Xiphophorus_couchianus
ENSGAFG00000004850	polr1e	100	93.735	ENSXMAG00000012484	polr1e	100	93.735	Xiphophorus_maculatus