EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000004928 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 19589 bases
Position: chrNHOQ01002042.1:172465-192053
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007240	RRM_1	PF00076.22	8.1e-27	1	2
ENSGAFP00000007240	RRM_1	PF00076.22	8.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007317	-	1322	-	ENSGAFP00000007240	264 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000004928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000004928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000004928	trnau1apa	84	32.143	ENSGAFG00000018195	pabpc4	79	31.447
ENSGAFG00000004928	trnau1apa	93	30.189	ENSGAFG00000010193	pabpc1b	59	30.189
ENSGAFG00000004928	trnau1apa	70	30.526	ENSGAFG00000002242	dtwd2	59	31.034
ENSGAFG00000004928	trnau1apa	65	57.558	ENSGAFG00000006770	trnau1apb	56	57.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000004928	trnau1apa	90	59.244	ENSG00000180098	TRNAU1AP	78	58.403	Homo_sapiens
ENSGAFG00000004928	trnau1apa	97	87.109	ENSAPOG00000007148	TRNAU1AP	80	87.755	Acanthochromis_polyacanthus
ENSGAFG00000004928	trnau1apa	91	59.167	ENSAMEG00000011367	TRNAU1AP	79	58.333	Ailuropoda_melanoleuca
ENSGAFG00000004928	trnau1apa	93	92.135	ENSACIG00000004161	trnau1apa	76	87.234	Amphilophus_citrinellus
ENSGAFG00000004928	trnau1apa	97	88.627	ENSAOCG00000008056	trnau1apa	79	87.347	Amphiprion_ocellaris
ENSGAFG00000004928	trnau1apa	97	88.627	ENSAPEG00000008868	trnau1apa	81	86.008	Amphiprion_percula
ENSGAFG00000004928	trnau1apa	97	83.650	ENSATEG00000012140	trnau1apa	80	84.585	Anabas_testudineus
ENSGAFG00000004928	trnau1apa	94	54.582	ENSAPLG00000002606	TRNAU1AP	81	57.563	Anas_platyrhynchos
ENSGAFG00000004928	trnau1apa	94	46.185	ENSACAG00000003995	-	77	46.218	Anolis_carolinensis
ENSGAFG00000004928	trnau1apa	90	59.244	ENSANAG00000018976	TRNAU1AP	78	58.403	Aotus_nancymaae
ENSGAFG00000004928	trnau1apa	97	88.235	ENSACLG00000018515	trnau1apa	80	88.163	Astatotilapia_calliptera
ENSGAFG00000004928	trnau1apa	82	60.000	ENSAMXG00000013750	trnau1apa	59	67.039	Astyanax_mexicanus
ENSGAFG00000004928	trnau1apa	90	58.824	ENSBTAG00000010393	TRNAU1AP	78	57.983	Bos_taurus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCJAG00000009717	TRNAU1AP	87	65.753	Callithrix_jacchus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCAFG00000011735	TRNAU1AP	78	58.403	Canis_familiaris
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCAFG00020023584	TRNAU1AP	78	58.403	Canis_lupus_dingo
ENSGAFG00000004928	trnau1apa	90	58.824	ENSCHIG00000023215	TRNAU1AP	78	57.983	Capra_hircus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSTSYG00000003506	TRNAU1AP	87	65.753	Carlito_syrichta
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCPOG00000001925	TRNAU1AP	78	58.403	Cavia_porcellus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCCAG00000037506	TRNAU1AP	87	65.753	Cebus_capucinus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCATG00000044617	TRNAU1AP	87	65.753	Cercocebus_atys
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCLAG00000008223	TRNAU1AP	78	58.403	Chinchilla_lanigera
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCSAG00000001014	TRNAU1AP	78	58.403	Chlorocebus_sabaeus
ENSGAFG00000004928	trnau1apa	91	55.833	ENSCPBG00000000121	TRNAU1AP	78	57.826	Chrysemys_picta_bellii
ENSGAFG00000004928	trnau1apa	61	49.689	ENSCSAVG00000011781	-	84	50.000	Ciona_savignyi
ENSGAFG00000004928	trnau1apa	90	50.000	ENSCANG00000041949	TRNAU1AP	75	49.160	Colobus_angolensis_palliatus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCGRG00001004713	Trnau1ap	78	58.403	Cricetulus_griseus_chok1gshd
ENSGAFG00000004928	trnau1apa	90	59.244	ENSCGRG00000014532	Trnau1ap	78	58.403	Cricetulus_griseus_crigri
ENSGAFG00000004928	trnau1apa	97	75.479	ENSCSEG00000006663	trnau1apa	80	74.699	Cynoglossus_semilaevis
ENSGAFG00000004928	trnau1apa	92	93.416	ENSCVAG00000018069	trnau1apa	79	93.469	Cyprinodon_variegatus
ENSGAFG00000004928	trnau1apa	83	55.856	ENSDARG00000101323	trnau1apa	57	62.921	Danio_rerio
ENSGAFG00000004928	trnau1apa	66	58.192	ENSDNOG00000047959	-	89	58.721	Dasypus_novemcinctus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSDNOG00000033009	TRNAU1AP	78	58.403	Dasypus_novemcinctus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSDORG00000006349	Trnau1ap	97	58.403	Dipodomys_ordii
ENSGAFG00000004928	trnau1apa	82	41.667	FBgn0031607	CG15440	53	45.506	Drosophila_melanogaster
ENSGAFG00000004928	trnau1apa	73	58.462	ENSETEG00000012594	TRNAU1AP	74	57.436	Echinops_telfairi
ENSGAFG00000004928	trnau1apa	71	46.591	ENSEBUG00000006349	-	56	46.591	Eptatretus_burgeri
ENSGAFG00000004928	trnau1apa	90	59.244	ENSEASG00005010062	TRNAU1AP	90	65.753	Equus_asinus_asinus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSECAG00000012980	TRNAU1AP	90	65.753	Equus_caballus
ENSGAFG00000004928	trnau1apa	97	70.930	ENSELUG00000017686	trnau1apa	80	72.289	Esox_lucius
ENSGAFG00000004928	trnau1apa	90	59.244	ENSFCAG00000013401	TRNAU1AP	78	58.403	Felis_catus
ENSGAFG00000004928	trnau1apa	86	57.269	ENSFALG00000001371	TRNAU1AP	78	57.826	Ficedula_albicollis
ENSGAFG00000004928	trnau1apa	90	59.244	ENSFDAG00000018599	TRNAU1AP	78	58.403	Fukomys_damarensis
ENSGAFG00000004928	trnau1apa	91	91.429	ENSFHEG00000018232	trnau1apa	89	88.806	Fundulus_heteroclitus
ENSGAFG00000004928	trnau1apa	85	68.996	ENSGMOG00000016508	trnau1apa	80	66.400	Gadus_morhua
ENSGAFG00000004928	trnau1apa	98	55.212	ENSGALG00000001310	-	86	57.676	Gallus_gallus
ENSGAFG00000004928	trnau1apa	95	86.056	ENSGACG00000001443	trnau1apa	80	86.531	Gasterosteus_aculeatus
ENSGAFG00000004928	trnau1apa	91	55.417	ENSGAGG00000004940	TRNAU1AP	78	57.826	Gopherus_agassizii
ENSGAFG00000004928	trnau1apa	90	59.244	ENSGGOG00000003511	TRNAU1AP	87	65.753	Gorilla_gorilla
ENSGAFG00000004928	trnau1apa	92	94.074	ENSHBUG00000002510	trnau1apa	80	86.400	Haplochromis_burtoni
ENSGAFG00000004928	trnau1apa	90	59.244	ENSHGLG00000010380	TRNAU1AP	78	58.403	Heterocephalus_glaber_female
ENSGAFG00000004928	trnau1apa	90	56.723	ENSHGLG00100012699	TRNAU1AP	78	55.882	Heterocephalus_glaber_male
ENSGAFG00000004928	trnau1apa	94	80.632	ENSHCOG00000014770	trnau1apa	80	78.800	Hippocampus_comes
ENSGAFG00000004928	trnau1apa	90	59.244	ENSSTOG00000000079	TRNAU1AP	78	58.403	Ictidomys_tridecemlineatus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSJJAG00000010128	Trnau1ap	78	58.403	Jaculus_jaculus
ENSGAFG00000004928	trnau1apa	99	87.833	ENSKMAG00000001230	trnau1apa	80	90.204	Kryptolebias_marmoratus
ENSGAFG00000004928	trnau1apa	91	83.401	ENSLBEG00000011683	trnau1apa	78	81.633	Labrus_bergylta
ENSGAFG00000004928	trnau1apa	90	51.883	ENSLACG00000005541	TRNAU1AP	79	52.500	Latimeria_chalumnae
ENSGAFG00000004928	trnau1apa	90	62.500	ENSLOCG00000004041	trnau1apa	80	61.250	Lepisosteus_oculatus
ENSGAFG00000004928	trnau1apa	90	59.664	ENSLAFG00000007628	TRNAU1AP	78	58.824	Loxodonta_africana
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMFAG00000043751	TRNAU1AP	87	65.753	Macaca_fascicularis
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMMUG00000006561	TRNAU1AP	78	58.403	Macaca_mulatta
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMNEG00000044201	TRNAU1AP	87	65.753	Macaca_nemestrina
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMLEG00000015649	TRNAU1AP	87	65.753	Mandrillus_leucophaeus
ENSGAFG00000004928	trnau1apa	97	82.288	ENSMAMG00000001247	trnau1apa	80	83.600	Mastacembelus_armatus
ENSGAFG00000004928	trnau1apa	97	88.235	ENSMZEG00005017722	trnau1apa	80	88.163	Maylandia_zebra
ENSGAFG00000004928	trnau1apa	97	55.078	ENSMGAG00000002105	TRNAU1AP	78	57.143	Meleagris_gallopavo
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMICG00000008386	TRNAU1AP	87	65.753	Microcebus_murinus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMOCG00000011189	Trnau1ap	78	58.403	Microtus_ochrogaster
ENSGAFG00000004928	trnau1apa	92	74.089	ENSMMOG00000012107	trnau1apa	79	74.089	Mola_mola
ENSGAFG00000004928	trnau1apa	90	58.403	ENSMODG00000010927	TRNAU1AP	78	57.143	Monodelphis_domestica
ENSGAFG00000004928	trnau1apa	97	86.434	ENSMALG00000016778	trnau1apa	80	87.903	Monopterus_albus
ENSGAFG00000004928	trnau1apa	88	66.667	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	62.025	Mus_caroli
ENSGAFG00000004928	trnau1apa	88	66.667	ENSMUSG00000028898	Trnau1ap	92	62.025	Mus_musculus
ENSGAFG00000004928	trnau1apa	88	66.667	MGP_PahariEiJ_G0028896	Trnau1ap	84	72.881	Mus_pahari
ENSGAFG00000004928	trnau1apa	88	66.667	MGP_SPRETEiJ_G0027544	Trnau1ap	92	62.025	Mus_spretus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMPUG00000015511	TRNAU1AP	78	58.403	Mustela_putorius_furo
ENSGAFG00000004928	trnau1apa	90	59.244	ENSMLUG00000012586	TRNAU1AP	78	58.403	Myotis_lucifugus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSNGAG00000015881	Trnau1ap	78	58.403	Nannospalax_galili
ENSGAFG00000004928	trnau1apa	94	74.597	ENSNBRG00000001758	trnau1apa	77	74.074	Neolamprologus_brichardi
ENSGAFG00000004928	trnau1apa	90	59.244	ENSNLEG00000009822	TRNAU1AP	87	65.753	Nomascus_leucogenys
ENSGAFG00000004928	trnau1apa	87	58.874	ENSMEUG00000006117	TRNAU1AP	78	57.143	Notamacropus_eugenii
ENSGAFG00000004928	trnau1apa	90	59.244	ENSODEG00000002970	TRNAU1AP	78	58.403	Octodon_degus
ENSGAFG00000004928	trnau1apa	94	88.259	ENSONIG00000004715	trnau1apa	93	88.186	Oreochromis_niloticus
ENSGAFG00000004928	trnau1apa	89	42.678	ENSOANG00000005325	-	77	42.500	Ornithorhynchus_anatinus
ENSGAFG00000004928	trnau1apa	90	57.563	ENSOCUG00000011704	-	78	56.723	Oryctolagus_cuniculus
ENSGAFG00000004928	trnau1apa	64	63.743	ENSOCUG00000002353	-	60	63.743	Oryctolagus_cuniculus
ENSGAFG00000004928	trnau1apa	92	47.541	ENSOCUG00000006834	-	90	47.131	Oryctolagus_cuniculus
ENSGAFG00000004928	trnau1apa	91	90.417	ENSORLG00000010428	trnau1apa	79	89.796	Oryzias_latipes
ENSGAFG00000004928	trnau1apa	91	90.417	ENSORLG00020000926	trnau1ap	79	89.796	Oryzias_latipes_hni
ENSGAFG00000004928	trnau1apa	91	90.417	ENSORLG00015009858	trnau1ap	79	89.796	Oryzias_latipes_hsok
ENSGAFG00000004928	trnau1apa	91	91.250	ENSOMEG00000007873	trnau1apa	79	90.612	Oryzias_melastigma
ENSGAFG00000004928	trnau1apa	90	59.244	ENSOGAG00000002274	TRNAU1AP	78	58.403	Otolemur_garnettii
ENSGAFG00000004928	trnau1apa	90	58.824	ENSOARG00000002843	TRNAU1AP	78	57.983	Ovis_aries
ENSGAFG00000004928	trnau1apa	90	59.244	ENSPPAG00000033927	TRNAU1AP	87	65.753	Pan_paniscus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSPPRG00000004416	TRNAU1AP	78	58.403	Panthera_pardus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSPTIG00000016677	TRNAU1AP	78	58.403	Panthera_tigris_altaica
ENSGAFG00000004928	trnau1apa	57	68.421	ENSPTRG00000000434	-	59	67.532	Pan_troglodytes
ENSGAFG00000004928	trnau1apa	90	59.244	ENSPANG00000016019	TRNAU1AP	87	65.753	Papio_anubis
ENSGAFG00000004928	trnau1apa	98	57.854	ENSPKIG00000015511	trnau1apa	77	58.159	Paramormyrops_kingsleyae
ENSGAFG00000004928	trnau1apa	91	56.667	ENSPSIG00000006864	TRNAU1AP	78	57.826	Pelodiscus_sinensis
ENSGAFG00000004928	trnau1apa	89	75.527	ENSPMGG00000023893	trnau1apa	78	71.488	Periophthalmus_magnuspinnatus
ENSGAFG00000004928	trnau1apa	90	58.824	ENSPEMG00000007877	Trnau1ap	78	57.983	Peromyscus_maniculatus_bairdii
ENSGAFG00000004928	trnau1apa	86	51.528	ENSPMAG00000005934	trnau1apa	96	49.782	Petromyzon_marinus
ENSGAFG00000004928	trnau1apa	64	54.335	ENSPMAG00000000592	trnau1apa	95	54.335	Petromyzon_marinus
ENSGAFG00000004928	trnau1apa	99	97.338	ENSPFOG00000008100	trnau1apa	85	97.338	Poecilia_formosa
ENSGAFG00000004928	trnau1apa	95	97.211	ENSPLAG00000010236	trnau1apa	85	97.211	Poecilia_latipinna
ENSGAFG00000004928	trnau1apa	99	95.038	ENSPMEG00000016387	trnau1apa	77	97.541	Poecilia_mexicana
ENSGAFG00000004928	trnau1apa	81	92.391	ENSPREG00000019821	trnau1apa	71	92.391	Poecilia_reticulata
ENSGAFG00000004928	trnau1apa	79	45.972	ENSPPYG00000001639	-	77	47.867	Pongo_abelii
ENSGAFG00000004928	trnau1apa	90	59.244	ENSPCOG00000027712	-	78	58.403	Propithecus_coquereli
ENSGAFG00000004928	trnau1apa	50	65.909	ENSPCOG00000023470	-	55	65.909	Propithecus_coquereli
ENSGAFG00000004928	trnau1apa	90	59.244	ENSPVAG00000017214	TRNAU1AP	78	58.403	Pteropus_vampyrus
ENSGAFG00000004928	trnau1apa	97	86.590	ENSPNYG00000010130	trnau1apa	96	86.400	Pundamilia_nyererei
ENSGAFG00000004928	trnau1apa	93	53.036	ENSPNAG00000024905	trnau1apa	64	67.059	Pygocentrus_nattereri
ENSGAFG00000004928	trnau1apa	97	57.588	ENSRNOG00000055344	Trnau1ap	77	58.403	Rattus_norvegicus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSRBIG00000029083	TRNAU1AP	87	65.753	Rhinopithecus_bieti
ENSGAFG00000004928	trnau1apa	90	59.244	ENSRROG00000029128	TRNAU1AP	87	65.753	Rhinopithecus_roxellana
ENSGAFG00000004928	trnau1apa	90	59.244	ENSSBOG00000021299	TRNAU1AP	87	65.753	Saimiri_boliviensis_boliviensis
ENSGAFG00000004928	trnau1apa	90	58.403	ENSSHAG00000008108	TRNAU1AP	78	57.143	Sarcophilus_harrisii
ENSGAFG00000004928	trnau1apa	95	82.283	ENSSMAG00000020851	trnau1apa	80	82.258	Scophthalmus_maximus
ENSGAFG00000004928	trnau1apa	97	84.170	ENSSDUG00000011734	trnau1apa	80	85.542	Seriola_dumerili
ENSGAFG00000004928	trnau1apa	95	68.254	ENSSLDG00000012101	trnau1apa	75	94.074	Seriola_lalandi_dorsalis
ENSGAFG00000004928	trnau1apa	87	59.307	ENSSARG00000007536	TRNAU1AP	78	58.442	Sorex_araneus
ENSGAFG00000004928	trnau1apa	56	49.660	ENSSPUG00000010415	-	66	48.462	Sphenodon_punctatus
ENSGAFG00000004928	trnau1apa	96	54.118	ENSSPUG00000010400	-	83	53.815	Sphenodon_punctatus
ENSGAFG00000004928	trnau1apa	97	87.059	ENSSPAG00000005029	trnau1apa	79	88.163	Stegastes_partitus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSSSCG00000030284	TRNAU1AP	78	58.403	Sus_scrofa
ENSGAFG00000004928	trnau1apa	92	56.967	ENSTGUG00000000735	-	78	57.143	Taeniopygia_guttata
ENSGAFG00000004928	trnau1apa	95	84.921	ENSTRUG00000003352	trnau1apa	80	82.520	Takifugu_rubripes
ENSGAFG00000004928	trnau1apa	90	82.917	ENSTNIG00000006129	trnau1apa	80	81.452	Tetraodon_nigroviridis
ENSGAFG00000004928	trnau1apa	73	51.282	ENSTBEG00000008049	-	74	50.256	Tupaia_belangeri
ENSGAFG00000004928	trnau1apa	90	59.244	ENSTTRG00000001854	TRNAU1AP	78	58.403	Tursiops_truncatus
ENSGAFG00000004928	trnau1apa	86	59.031	ENSUAMG00000008789	TRNAU1AP	78	58.150	Ursus_americanus
ENSGAFG00000004928	trnau1apa	90	59.244	ENSUMAG00000011068	TRNAU1AP	78	58.403	Ursus_maritimus
ENSGAFG00000004928	trnau1apa	90	50.000	ENSVPAG00000006778	TRNAU1AP	79	49.200	Vicugna_pacos
ENSGAFG00000004928	trnau1apa	90	59.244	ENSVVUG00000012518	TRNAU1AP	76	58.403	Vulpes_vulpes
ENSGAFG00000004928	trnau1apa	99	97.719	ENSXMAG00000017361	trnau1apa	85	97.719	Xiphophorus_maculatus