EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000005025 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
rbfox3l|si:ch73-322f21.1
Full Name
RNA binding fox-1 homolog 3b
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
228616 bases
Position
chrNHOQ01002523.1:516826-745441
Accession
ZDB-GENE-091204-46
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000007418Fox-1_CPF12414.82.1e-3711
ENSGAFP00000007443Fox-1_CPF12414.83.7e-2711
ENSGAFP00000007418RRM_1PF00076.221.4e-1811
ENSGAFP00000007443RRM_1PF00076.221.4e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000007522-1041-ENSGAFP00000007443346 (aa)--
ENSGAFT00000007497-1023-ENSGAFP00000007418341 (aa)--
Gene Model
Click here to download ENSGAFG00000005025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000005025rbfox3b5664.091ENSGAFG00000008448rbfox210065.909
ENSGAFG00000005025rbfox3b8260.526ENSGAFG00000013211rbfox1l8659.748
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000005025rbfox3b8680.000ENSG00000167281RBFOX39780.719Homo_sapiens
ENSGAFG00000005025rbfox3b10092.643ENSAPOG00000021630rbfox3b10091.233Acanthochromis_polyacanthus
ENSGAFG00000005025rbfox3b10072.857ENSAPOG00000015658-9273.143Acanthochromis_polyacanthus
ENSGAFG00000005025rbfox3b8675.472ENSAMEG00000014170RBFOX38871.143Ailuropoda_melanoleuca
ENSGAFG00000005025rbfox3b8368.012ENSACIG00000003768-9068.944Amphilophus_citrinellus
ENSGAFG00000005025rbfox3b8894.059ENSACIG00000010817rbfox3b10094.020Amphilophus_citrinellus
ENSGAFG00000005025rbfox3b10092.643ENSAOCG00000012358rbfox3b10092.643Amphiprion_ocellaris
ENSGAFG00000005025rbfox3b10079.775ENSAOCG00000010786-9880.618Amphiprion_ocellaris
ENSGAFG00000005025rbfox3b10089.548ENSAPEG00000019081rbfox3b10089.548Amphiprion_percula
ENSGAFG00000005025rbfox3b9173.410ENSAPEG00000015891-8973.699Amphiprion_percula
ENSGAFG00000005025rbfox3b8888.024ENSATEG00000019945rbfox3b9788.024Anabas_testudineus
ENSGAFG00000005025rbfox3b8678.000ENSATEG00000023101-9477.850Anabas_testudineus
ENSGAFG00000005025rbfox3b9774.095ENSACAG00000016093RBFOX39975.766Anolis_carolinensis
ENSGAFG00000005025rbfox3b8679.667ENSANAG00000023457RBFOX39780.392Aotus_nancymaae
ENSGAFG00000005025rbfox3b10091.848ENSACLG00000020011rbfox3b9796.721Astatotilapia_calliptera
ENSGAFG00000005025rbfox3b9975.477ENSACLG00000025552-10076.294Astatotilapia_calliptera
ENSGAFG00000005025rbfox3b10078.249ENSAMXG00000037246rbfox3a10079.032Astyanax_mexicanus
ENSGAFG00000005025rbfox3b9976.359ENSAMXG00000042841rbfox3b10079.155Astyanax_mexicanus
ENSGAFG00000005025rbfox3b7380.784ENSBTAG00000006280RBFOX39861.473Bos_taurus
ENSGAFG00000005025rbfox3b8674.161ENSCJAG00000009563RBFOX39377.961Callithrix_jacchus
ENSGAFG00000005025rbfox3b6984.583ENSCAFG00000005547RBFOX38585.774Canis_familiaris
ENSGAFG00000005025rbfox3b8079.221ENSCAFG00020008126RBFOX38184.000Canis_lupus_dingo
ENSGAFG00000005025rbfox3b8668.300ENSCHIG00000009124RBFOX38184.000Capra_hircus
ENSGAFG00000005025rbfox3b7493.103ENSTSYG00000029617RBFOX39870.339Carlito_syrichta
ENSGAFG00000005025rbfox3b8668.571ENSCPOG00000021703RBFOX39869.101Cavia_porcellus
ENSGAFG00000005025rbfox3b8679.667ENSCCAG00000028450RBFOX39780.392Cebus_capucinus
ENSGAFG00000005025rbfox3b8680.000ENSCATG00000018349RBFOX39780.719Cercocebus_atys
ENSGAFG00000005025rbfox3b8668.966ENSCLAG00000006449RBFOX39869.492Chinchilla_lanigera
ENSGAFG00000005025rbfox3b8680.000ENSCSAG00000002355RBFOX39780.719Chlorocebus_sabaeus
ENSGAFG00000005025rbfox3b8682.215ENSCPBG00000010904RBFOX39781.639Chrysemys_picta_bellii
ENSGAFG00000005025rbfox3b8680.000ENSCANG00000043120RBFOX39780.719Colobus_angolensis_palliatus
ENSGAFG00000005025rbfox3b7486.207ENSCGRG00001019476Rbfox39868.820Cricetulus_griseus_chok1gshd
ENSGAFG00000005025rbfox3b7486.207ENSCGRG00000003268Rbfox39868.820Cricetulus_griseus_crigri
ENSGAFG00000005025rbfox3b9980.563ENSCSEG00000015567RBFOX39881.408Cynoglossus_semilaevis
ENSGAFG00000005025rbfox3b9972.702ENSCSEG00000020606RBFOX310072.702Cynoglossus_semilaevis
ENSGAFG00000005025rbfox3b10092.643ENSCVAG00000006882rbfox3b10092.643Cyprinodon_variegatus
ENSGAFG00000005025rbfox3b10078.249ENSDARG00000010083rbfox3a10080.054Danio_rerio
ENSGAFG00000005025rbfox3b8878.361ENSDARG00000074310rbfox3b9680.333Danio_rerio
ENSGAFG00000005025rbfox3b7565.798ENSDNOG00000039391RBFOX36285.106Dasypus_novemcinctus
ENSGAFG00000005025rbfox3b8662.500ENSDORG00000005352Rbfox38186.957Dipodomys_ordii
ENSGAFG00000005025rbfox3b8554.333ENSEBUG00000013559RBFOX38452.475Eptatretus_burgeri
ENSGAFG00000005025rbfox3b8768.987ENSEBUG00000002129RBFOX39664.431Eptatretus_burgeri
ENSGAFG00000005025rbfox3b8679.801ENSEASG00005005059RBFOX39780.519Equus_asinus_asinus
ENSGAFG00000005025rbfox3b8679.470ENSECAG00000023811RBFOX39880.259Equus_caballus
ENSGAFG00000005025rbfox3b7775.385ENSEEUG00000013974RBFOX37085.246Erinaceus_europaeus
ENSGAFG00000005025rbfox3b10088.011ENSELUG00000017963rbfox3b10088.011Esox_lucius
ENSGAFG00000005025rbfox3b5365.574ENSELUG00000009807-5461.500Esox_lucius
ENSGAFG00000005025rbfox3b9773.204ENSFCAG00000002555RBFOX39779.739Felis_catus
ENSGAFG00000005025rbfox3b8666.465ENSFALG00000012288RBFOX38861.813Ficedula_albicollis
ENSGAFG00000005025rbfox3b8663.793ENSFDAG00000007489RBFOX39864.407Fukomys_damarensis
ENSGAFG00000005025rbfox3b8887.829ENSFHEG00000008550rbfox3b9787.829Fundulus_heteroclitus
ENSGAFG00000005025rbfox3b6692.135ENSGMOG00000019304-7891.837Gadus_morhua
ENSGAFG00000005025rbfox3b9775.766ENSGALG00000032889RBFOX39977.654Gallus_gallus
ENSGAFG00000005025rbfox3b8386.275ENSGACG00000002138-8086.275Gasterosteus_aculeatus
ENSGAFG00000005025rbfox3b9777.500ENSGAGG00000020025RBFOX39781.639Gopherus_agassizii
ENSGAFG00000005025rbfox3b8680.000ENSGGOG00000012546RBFOX39780.719Gorilla_gorilla
ENSGAFG00000005025rbfox3b10092.098ENSHBUG00000018099rbfox3b10092.098Haplochromis_burtoni
ENSGAFG00000005025rbfox3b8881.046ENSHBUG00000023098-9575.380Haplochromis_burtoni
ENSGAFG00000005025rbfox3b8667.614ENSHGLG00000008679RBFOX39868.156Heterocephalus_glaber_female
ENSGAFG00000005025rbfox3b8664.773ENSHGLG00100014739RBFOX39465.363Heterocephalus_glaber_male
ENSGAFG00000005025rbfox3b9979.282ENSHCOG00000007444RBFOX39479.235Hippocampus_comes
ENSGAFG00000005025rbfox3b8377.083ENSHCOG00000001863RBFOX39375.578Hippocampus_comes
ENSGAFG00000005025rbfox3b8872.239ENSIPUG00000021966rbfox3b9881.818Ictalurus_punctatus
ENSGAFG00000005025rbfox3b10076.658ENSIPUG00000012010rbfox3a10078.763Ictalurus_punctatus
ENSGAFG00000005025rbfox3b8665.993ENSSTOG00000026817RBFOX39766.230Ictidomys_tridecemlineatus
ENSGAFG00000005025rbfox3b8078.355ENSJJAG00000014167Rbfox38385.106Jaculus_jaculus
ENSGAFG00000005025rbfox3b10092.643ENSKMAG00000006726rbfox3b10092.643Kryptolebias_marmoratus
ENSGAFG00000005025rbfox3b10078.552ENSLBEG00000022508-10078.747Labrus_bergylta
ENSGAFG00000005025rbfox3b10090.761ENSLBEG00000004030rbfox3b10093.355Labrus_bergylta
ENSGAFG00000005025rbfox3b8670.732ENSLACG00000018409-9070.028Latimeria_chalumnae
ENSGAFG00000005025rbfox3b8688.333ENSLOCG00000012267rbfox3a9882.317Lepisosteus_oculatus
ENSGAFG00000005025rbfox3b7590.625ENSLAFG00000016623RBFOX39469.972Loxodonta_africana
ENSGAFG00000005025rbfox3b7978.947ENSMFAG00000002247RBFOX39870.255Macaca_fascicularis
ENSGAFG00000005025rbfox3b8680.000ENSMMUG00000023028RBFOX39780.719Macaca_mulatta
ENSGAFG00000005025rbfox3b8679.667ENSMNEG00000041147RBFOX39780.392Macaca_nemestrina
ENSGAFG00000005025rbfox3b8680.000ENSMLEG00000025686RBFOX39780.719Mandrillus_leucophaeus
ENSGAFG00000005025rbfox3b8679.195ENSMAMG00000020600-9476.615Mastacembelus_armatus
ENSGAFG00000005025rbfox3b8887.129ENSMAMG00000019810rbfox3b10089.701Mastacembelus_armatus
ENSGAFG00000005025rbfox3b8161.801ENSMZEG00005003055-6682.166Maylandia_zebra
ENSGAFG00000005025rbfox3b10092.098ENSMZEG00005000781rbfox3b10091.507Maylandia_zebra
ENSGAFG00000005025rbfox3b6178.082ENSMGAG00000005600RBFOX38378.082Meleagris_gallopavo
ENSGAFG00000005025rbfox3b8668.588ENSMAUG00000013543Rbfox39868.169Mesocricetus_auratus
ENSGAFG00000005025rbfox3b7693.333ENSMICG00000014898RBFOX39681.271Microcebus_murinus
ENSGAFG00000005025rbfox3b7486.207ENSMOCG00000015373Rbfox39867.887Microtus_ochrogaster
ENSGAFG00000005025rbfox3b10093.132ENSMMOG00000020193rbfox3b10093.132Mola_mola
ENSGAFG00000005025rbfox3b9773.130ENSMODG00000002089RBFOX39975.069Monodelphis_domestica
ENSGAFG00000005025rbfox3b10091.008ENSMALG00000020407rbfox3b10091.008Monopterus_albus
ENSGAFG00000005025rbfox3b10076.882ENSMALG00000018270-10077.384Monopterus_albus
ENSGAFG00000005025rbfox3b8678.667MGP_CAROLIEiJ_G0017487Rbfox39686.331Mus_caroli
ENSGAFG00000005025rbfox3b8679.070ENSMUSG00000025576Rbfox39686.331Mus_musculus
ENSGAFG00000005025rbfox3b8679.070MGP_PahariEiJ_G0018614Rbfox39687.050Mus_pahari
ENSGAFG00000005025rbfox3b8679.000MGP_SPRETEiJ_G0018331Rbfox39686.331Mus_spretus
ENSGAFG00000005025rbfox3b8670.920ENSMPUG00000012319RBFOX39667.204Mustela_putorius_furo
ENSGAFG00000005025rbfox3b7489.655ENSNGAG00000018006Rbfox39869.774Nannospalax_galili
ENSGAFG00000005025rbfox3b8976.176ENSNBRG00000022885-9276.324Neolamprologus_brichardi
ENSGAFG00000005025rbfox3b10093.113ENSNBRG00000010102rbfox3b10093.113Neolamprologus_brichardi
ENSGAFG00000005025rbfox3b8756.902ENSNLEG00000000153-9660.000Nomascus_leucogenys
ENSGAFG00000005025rbfox3b7985.106ENSMEUG00000004218-8285.106Notamacropus_eugenii
ENSGAFG00000005025rbfox3b6182.759ENSOPRG00000016279-6580.000Ochotona_princeps
ENSGAFG00000005025rbfox3b8680.399ENSODEG00000009433RBFOX39780.130Octodon_degus
ENSGAFG00000005025rbfox3b8881.373ENSONIG00000007282-8982.353Oreochromis_niloticus
ENSGAFG00000005025rbfox3b10092.916ENSONIG00000009549rbfox3b10092.916Oreochromis_niloticus
ENSGAFG00000005025rbfox3b7459.667ENSOCUG00000014217RBFOX35882.609Oryctolagus_cuniculus
ENSGAFG00000005025rbfox3b10091.826ENSORLG00000000905rbfox3b7990.164Oryzias_latipes
ENSGAFG00000005025rbfox3b10091.826ENSORLG00020018030rbfox3b9990.164Oryzias_latipes_hni
ENSGAFG00000005025rbfox3b10092.098ENSORLG00015009200rbfox3b10092.098Oryzias_latipes_hsok
ENSGAFG00000005025rbfox3b8389.389ENSOMEG00000014677rbfox3b8589.198Oryzias_melastigma
ENSGAFG00000005025rbfox3b8679.933ENSOGAG00000029595RBFOX38181.188Otolemur_garnettii
ENSGAFG00000005025rbfox3b6867.692ENSOARG00000002908RBFOX38955.620Ovis_aries
ENSGAFG00000005025rbfox3b7380.784ENSPPAG00000025383RBFOX39779.928Pan_paniscus
ENSGAFG00000005025rbfox3b8668.529ENSPPRG00000007819RBFOX39870.317Panthera_pardus
ENSGAFG00000005025rbfox3b8680.000ENSPTRG00000009727RBFOX39780.719Pan_troglodytes
ENSGAFG00000005025rbfox3b8680.000ENSPANG00000019837RBFOX39780.719Papio_anubis
ENSGAFG00000005025rbfox3b10081.283ENSPKIG00000010299rbfox3a9982.081Paramormyrops_kingsleyae
ENSGAFG00000005025rbfox3b8869.707ENSPKIG00000022633-9763.260Paramormyrops_kingsleyae
ENSGAFG00000005025rbfox3b8789.423ENSPMGG00000008000rbfox3b9789.423Periophthalmus_magnuspinnatus
ENSGAFG00000005025rbfox3b7486.207ENSPEMG00000010500Rbfox39868.451Peromyscus_maniculatus_bairdii
ENSGAFG00000005025rbfox3b5073.158ENSPMAG00000008689rbfox3b9375.263Petromyzon_marinus
ENSGAFG00000005025rbfox3b9765.441ENSPCIG00000005766RBFOX38585.106Phascolarctos_cinereus
ENSGAFG00000005025rbfox3b10092.643ENSPFOG00000018294rbfox3b9692.643Poecilia_formosa
ENSGAFG00000005025rbfox3b6699.561ENSPLAG00000000481rbfox3b7599.561Poecilia_latipinna
ENSGAFG00000005025rbfox3b8887.500ENSPMEG00000022997rbfox3b9787.500Poecilia_mexicana
ENSGAFG00000005025rbfox3b10092.663ENSPREG00000012886rbfox3b9992.663Poecilia_reticulata
ENSGAFG00000005025rbfox3b7375.099ENSPPYG00000008704RBFOX38274.729Pongo_abelii
ENSGAFG00000005025rbfox3b7486.207ENSPCAG00000001401RBFOX39863.173Procavia_capensis
ENSGAFG00000005025rbfox3b8277.917ENSPCOG00000012689RBFOX38385.106Propithecus_coquereli
ENSGAFG00000005025rbfox3b7486.207ENSPVAG00000015243RBFOX38377.551Pteropus_vampyrus
ENSGAFG00000005025rbfox3b10077.966ENSPNYG00000009079-9778.090Pundamilia_nyererei
ENSGAFG00000005025rbfox3b10087.006ENSPNYG00000010414rbfox3b10087.006Pundamilia_nyererei
ENSGAFG00000005025rbfox3b8869.307ENSPNAG00000018173rbfox3b9171.333Pygocentrus_nattereri
ENSGAFG00000005025rbfox3b10078.515ENSPNAG00000002889rbfox3a10079.310Pygocentrus_nattereri
ENSGAFG00000005025rbfox3b8679.070ENSRNOG00000003386Rbfox39779.870Rattus_norvegicus
ENSGAFG00000005025rbfox3b9772.928ENSRBIG00000040449RBFOX39974.862Rhinopithecus_bieti
ENSGAFG00000005025rbfox3b8680.000ENSRROG00000000766RBFOX39780.719Rhinopithecus_roxellana
ENSGAFG00000005025rbfox3b8679.667ENSSBOG00000031591RBFOX39780.392Saimiri_boliviensis_boliviensis
ENSGAFG00000005025rbfox3b8673.112ENSSHAG00000016076RBFOX39771.475Sarcophilus_harrisii
ENSGAFG00000005025rbfox3b10080.481ENSSFOG00015023260rbfox3a10081.551Scleropages_formosus
ENSGAFG00000005025rbfox3b9766.298ENSSFOG00015004716RBFOX39966.851Scleropages_formosus
ENSGAFG00000005025rbfox3b10088.542ENSSMAG00000012618rbfox3b8788.542Scophthalmus_maximus
ENSGAFG00000005025rbfox3b9976.567ENSSMAG00000019052-9781.046Scophthalmus_maximus
ENSGAFG00000005025rbfox3b10076.685ENSSDUG00000015801-9977.528Seriola_dumerili
ENSGAFG00000005025rbfox3b8887.829ENSSDUG00000023183rbfox3b9787.829Seriola_dumerili
ENSGAFG00000005025rbfox3b10092.916ENSSLDG00000000149rbfox3b10092.916Seriola_lalandi_dorsalis
ENSGAFG00000005025rbfox3b10080.056ENSSLDG00000016098-9980.899Seriola_lalandi_dorsalis
ENSGAFG00000005025rbfox3b8682.060ENSSPUG00000011733RBFOX39781.639Sphenodon_punctatus
ENSGAFG00000005025rbfox3b7876.753ENSSPAG00000004898-8376.619Stegastes_partitus
ENSGAFG00000005025rbfox3b10090.113ENSSPAG00000017571rbfox3b10090.113Stegastes_partitus
ENSGAFG00000005025rbfox3b7880.882ENSSSCG00000039498RBFOX39669.497Sus_scrofa
ENSGAFG00000005025rbfox3b8886.943ENSTRUG00000004894rbfox3b9481.765Takifugu_rubripes
ENSGAFG00000005025rbfox3b8886.607ENSTNIG00000011278rbfox3b8486.607Tetraodon_nigroviridis
ENSGAFG00000005025rbfox3b7849.051ENSTBEG00000004296-8749.536Tupaia_belangeri
ENSGAFG00000005025rbfox3b7971.491ENSTTRG00000003676RBFOX38385.106Tursiops_truncatus
ENSGAFG00000005025rbfox3b8680.000ENSUAMG00000004668RBFOX39780.719Ursus_americanus
ENSGAFG00000005025rbfox3b9773.829ENSVVUG00000017864RBFOX39780.392Vulpes_vulpes
ENSGAFG00000005025rbfox3b8866.261ENSXETG00000020236rbfox38366.565Xenopus_tropicalis
ENSGAFG00000005025rbfox3b9893.539ENSXCOG00000018262rbfox3b10092.593Xiphophorus_couchianus
ENSGAFG00000005025rbfox3b10092.916ENSXMAG00000012939rbfox3b10092.916Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us