EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000005029 (Gene tree)
Gene ID: -
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 22226 bases
Position: chrNHOQ01001678.1:14436753-14458978
Accession: ZDB-GENE-030114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000007472	tRNA-synt_1g	PF09334.11	1.4e-16	1	1
ENSGAFP00000007457	tRNA-synt_1g	PF09334.11	4e-16	1	1
ENSGAFP00000007472	Anticodon_1	PF08264.13	7.4e-15	1	1
ENSGAFP00000007457	Anticodon_1	PF08264.13	7.5e-15	1	1
ENSGAFP00000007472	tRNA-synt_1	PF00133.22	1.7e-39	1	2
ENSGAFP00000007472	tRNA-synt_1	PF00133.22	1.7e-39	2	2
ENSGAFP00000007457	tRNA-synt_1	PF00133.22	5.3e-38	1	2
ENSGAFP00000007457	tRNA-synt_1	PF00133.22	5.3e-38	2	2
ENSGAFP00000007472	tRNA-synt_1e	PF01406.19	1.5e-06	1	1
ENSGAFP00000007457	tRNA-synt_1e	PF01406.19	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000007552	-	3519	-	ENSGAFP00000007472	1172 (aa)	-	-
ENSGAFT00000007536	-	5382	-	ENSGAFP00000007457	1184 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000005029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000005029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000005029	larsb	100	78.125	ENSG00000133706	LARS	100	78.831	Homo_sapiens
ENSGAFG00000005029	larsb	100	92.917	ENSAPOG00000010585	larsb	100	93.036	Acanthochromis_polyacanthus
ENSGAFG00000005029	larsb	99	77.956	ENSAMEG00000017584	LARS	100	77.956	Ailuropoda_melanoleuca
ENSGAFG00000005029	larsb	100	90.641	ENSACIG00000014026	larsb	99	90.717	Amphilophus_citrinellus
ENSGAFG00000005029	larsb	100	92.905	ENSAOCG00000016931	larsb	100	92.905	Amphiprion_ocellaris
ENSGAFG00000005029	larsb	100	92.990	ENSAPEG00000017720	larsb	100	92.990	Amphiprion_percula
ENSGAFG00000005029	larsb	100	87.605	ENSATEG00000010441	larsb	99	87.426	Anabas_testudineus
ENSGAFG00000005029	larsb	97	77.309	ENSAPLG00000008145	LARS	100	78.390	Anas_platyrhynchos
ENSGAFG00000005029	larsb	99	77.261	ENSACAG00000013916	LARS	99	77.346	Anolis_carolinensis
ENSGAFG00000005029	larsb	100	69.679	ENSANAG00000014375	LARS	100	69.679	Aotus_nancymaae
ENSGAFG00000005029	larsb	100	92.736	ENSACLG00000010881	larsb	100	92.736	Astatotilapia_calliptera
ENSGAFG00000005029	larsb	100	87.173	ENSAMXG00000019979	larsb	100	87.004	Astyanax_mexicanus
ENSGAFG00000005029	larsb	100	77.618	ENSBTAG00000006765	LARS	100	77.618	Bos_taurus
ENSGAFG00000005029	larsb	99	55.453	WBGene00003073	lars-1	99	55.453	Caenorhabditis_elegans
ENSGAFG00000005029	larsb	100	78.125	ENSCJAG00000021314	LARS	100	78.831	Callithrix_jacchus
ENSGAFG00000005029	larsb	100	78.378	ENSCAFG00000006431	LARS	100	78.378	Canis_familiaris
ENSGAFG00000005029	larsb	100	77.825	ENSCAFG00020025009	LARS	100	77.825	Canis_lupus_dingo
ENSGAFG00000005029	larsb	100	77.787	ENSCHIG00000014949	LARS	100	77.703	Capra_hircus
ENSGAFG00000005029	larsb	100	77.618	ENSTSYG00000001253	LARS	100	77.618	Carlito_syrichta
ENSGAFG00000005029	larsb	96	62.051	ENSCAPG00000015676	LARS	97	62.212	Cavia_aperea
ENSGAFG00000005029	larsb	100	76.351	ENSCPOG00000012329	LARS	100	76.351	Cavia_porcellus
ENSGAFG00000005029	larsb	99	78.493	ENSCCAG00000020789	LARS	99	78.577	Cebus_capucinus
ENSGAFG00000005029	larsb	97	78.329	ENSCATG00000033463	LARS	100	78.654	Cercocebus_atys
ENSGAFG00000005029	larsb	100	76.858	ENSCLAG00000011193	LARS	100	76.858	Chinchilla_lanigera
ENSGAFG00000005029	larsb	99	78.224	ENSCSAG00000012280	LARS	97	78.224	Chlorocebus_sabaeus
ENSGAFG00000005029	larsb	90	71.882	ENSCHOG00000009309	LARS	90	71.882	Choloepus_hoffmanni
ENSGAFG00000005029	larsb	100	78.523	ENSCPBG00000008415	LARS	99	80.179	Chrysemys_picta_bellii
ENSGAFG00000005029	larsb	99	63.912	ENSCING00000008535	-	99	63.238	Ciona_intestinalis
ENSGAFG00000005029	larsb	100	62.247	ENSCSAVG00000009040	-	100	67.869	Ciona_savignyi
ENSGAFG00000005029	larsb	100	78.209	ENSCANG00000031137	LARS	100	78.209	Colobus_angolensis_palliatus
ENSGAFG00000005029	larsb	93	72.066	ENSCGRG00001004647	Lars	99	72.066	Cricetulus_griseus_chok1gshd
ENSGAFG00000005029	larsb	100	73.671	ENSCGRG00000007284	Lars	100	73.671	Cricetulus_griseus_crigri
ENSGAFG00000005029	larsb	100	91.315	ENSCSEG00000014984	larsb	100	91.062	Cynoglossus_semilaevis
ENSGAFG00000005029	larsb	100	95.524	ENSCVAG00000014685	larsb	100	95.524	Cyprinodon_variegatus
ENSGAFG00000005029	larsb	68	87.484	ENSDARG00000019280	larsb	100	87.484	Danio_rerio
ENSGAFG00000005029	larsb	97	76.316	ENSDNOG00000017963	LARS	100	77.661	Dasypus_novemcinctus
ENSGAFG00000005029	larsb	100	72.789	ENSDORG00000014913	Lars	100	72.789	Dipodomys_ordii
ENSGAFG00000005029	larsb	99	58.054	FBgn0284253	LeuRS	99	58.473	Drosophila_melanogaster
ENSGAFG00000005029	larsb	94	63.106	ENSETEG00000003145	LARS	100	63.106	Echinops_telfairi
ENSGAFG00000005029	larsb	92	60.965	ENSEBUG00000014985	larsb	97	60.874	Eptatretus_burgeri
ENSGAFG00000005029	larsb	100	77.872	ENSEASG00005020569	LARS	100	78.145	Equus_asinus_asinus
ENSGAFG00000005029	larsb	100	77.787	ENSECAG00000008963	LARS	100	78.565	Equus_caballus
ENSGAFG00000005029	larsb	92	63.309	ENSEEUG00000014854	LARS	92	63.309	Erinaceus_europaeus
ENSGAFG00000005029	larsb	100	86.064	ENSELUG00000023311	larsb	100	86.064	Esox_lucius
ENSGAFG00000005029	larsb	100	77.400	ENSFCAG00000008715	LARS	100	79.794	Felis_catus
ENSGAFG00000005029	larsb	100	78.481	ENSFALG00000003209	LARS	93	78.312	Ficedula_albicollis
ENSGAFG00000005029	larsb	100	76.689	ENSFDAG00000020764	LARS	100	76.689	Fukomys_damarensis
ENSGAFG00000005029	larsb	91	94.239	ENSFHEG00000010437	larsb	100	94.239	Fundulus_heteroclitus
ENSGAFG00000005029	larsb	99	86.137	ENSGMOG00000013645	larsb	99	86.137	Gadus_morhua
ENSGAFG00000005029	larsb	100	78.535	ENSGALG00000007494	LARS	100	78.620	Gallus_gallus
ENSGAFG00000005029	larsb	99	88.409	ENSGACG00000020720	larsb	99	88.325	Gasterosteus_aculeatus
ENSGAFG00000005029	larsb	99	79.036	ENSGAGG00000002353	LARS	99	78.849	Gopherus_agassizii
ENSGAFG00000005029	larsb	100	78.041	ENSGGOG00000004103	LARS	100	78.041	Gorilla_gorilla
ENSGAFG00000005029	larsb	99	90.832	ENSHBUG00000003051	larsb	100	92.922	Haplochromis_burtoni
ENSGAFG00000005029	larsb	100	76.943	ENSHGLG00000006937	LARS	100	76.943	Heterocephalus_glaber_female
ENSGAFG00000005029	larsb	100	76.943	ENSHGLG00100002801	LARS	100	76.943	Heterocephalus_glaber_male
ENSGAFG00000005029	larsb	99	89.941	ENSHCOG00000003651	larsb	100	89.941	Hippocampus_comes
ENSGAFG00000005029	larsb	100	85.316	ENSIPUG00000010756	lars	100	85.236	Ictalurus_punctatus
ENSGAFG00000005029	larsb	100	77.872	ENSSTOG00000002356	LARS	100	77.872	Ictidomys_tridecemlineatus
ENSGAFG00000005029	larsb	100	76.689	ENSJJAG00000015265	Lars	100	76.689	Jaculus_jaculus
ENSGAFG00000005029	larsb	100	92.911	ENSKMAG00000009903	larsb	100	92.996	Kryptolebias_marmoratus
ENSGAFG00000005029	larsb	100	92.574	ENSLBEG00000025237	larsb	100	92.574	Labrus_bergylta
ENSGAFG00000005029	larsb	100	78.367	ENSLACG00000009321	LARS	100	78.620	Latimeria_chalumnae
ENSGAFG00000005029	larsb	99	82.826	ENSLOCG00000010442	larsb	99	82.657	Lepisosteus_oculatus
ENSGAFG00000005029	larsb	99	77.534	ENSLAFG00000000318	LARS	100	77.496	Loxodonta_africana
ENSGAFG00000005029	larsb	100	78.041	ENSMFAG00000038685	LARS	100	78.125	Macaca_fascicularis
ENSGAFG00000005029	larsb	100	78.125	ENSMMUG00000029787	LARS	100	78.209	Macaca_mulatta
ENSGAFG00000005029	larsb	100	75.701	ENSMNEG00000044014	LARS	100	75.616	Macaca_nemestrina
ENSGAFG00000005029	larsb	100	77.570	ENSMLEG00000037563	LARS	100	77.570	Mandrillus_leucophaeus
ENSGAFG00000005029	larsb	100	92.736	ENSMAMG00000021385	larsb	100	92.736	Mastacembelus_armatus
ENSGAFG00000005029	larsb	100	92.652	ENSMZEG00005002662	larsb	100	92.652	Maylandia_zebra
ENSGAFG00000005029	larsb	97	77.924	ENSMGAG00000009388	LARS	100	79.265	Meleagris_gallopavo
ENSGAFG00000005029	larsb	100	66.525	ENSMAUG00000003063	Lars	93	77.586	Mesocricetus_auratus
ENSGAFG00000005029	larsb	100	64.780	ENSMICG00000035435	-	100	64.780	Microcebus_murinus
ENSGAFG00000005029	larsb	100	78.209	ENSMICG00000035589	-	100	78.209	Microcebus_murinus
ENSGAFG00000005029	larsb	100	75.865	ENSMOCG00000002092	Lars	100	75.865	Microtus_ochrogaster
ENSGAFG00000005029	larsb	100	87.573	ENSMMOG00000013802	larsb	100	87.322	Mola_mola
ENSGAFG00000005029	larsb	99	72.851	ENSMODG00000010231	LARS	99	72.851	Monodelphis_domestica
ENSGAFG00000005029	larsb	99	89.403	ENSMALG00000018444	larsb	99	89.403	Monopterus_albus
ENSGAFG00000005029	larsb	100	76.203	MGP_CAROLIEiJ_G0022225	Lars	100	76.203	Mus_caroli
ENSGAFG00000005029	larsb	100	75.781	ENSMUSG00000024493	Lars	100	75.781	Mus_musculus
ENSGAFG00000005029	larsb	100	75.865	MGP_PahariEiJ_G0018958	Lars	100	75.865	Mus_pahari
ENSGAFG00000005029	larsb	100	76.118	MGP_SPRETEiJ_G0023135	Lars	100	76.118	Mus_spretus
ENSGAFG00000005029	larsb	100	78.209	ENSMPUG00000007844	LARS	100	78.209	Mustela_putorius_furo
ENSGAFG00000005029	larsb	99	77.346	ENSMLUG00000001125	LARS	100	77.346	Myotis_lucifugus
ENSGAFG00000005029	larsb	100	76.267	ENSNGAG00000011596	Lars	100	76.267	Nannospalax_galili
ENSGAFG00000005029	larsb	100	92.821	ENSNBRG00000005764	larsb	100	92.821	Neolamprologus_brichardi
ENSGAFG00000005029	larsb	100	77.145	ENSNLEG00000009816	LARS	100	77.145	Nomascus_leucogenys
ENSGAFG00000005029	larsb	53	80.180	ENSMEUG00000002332	-	60	74.216	Notamacropus_eugenii
ENSGAFG00000005029	larsb	79	80.108	ENSOPRG00000003076	LARS	83	80.108	Ochotona_princeps
ENSGAFG00000005029	larsb	99	75.021	ENSODEG00000004882	LARS	99	75.021	Octodon_degus
ENSGAFG00000005029	larsb	100	93.159	ENSONIG00000008493	larsb	100	93.159	Oreochromis_niloticus
ENSGAFG00000005029	larsb	99	75.526	ENSOANG00000005755	LARS	99	75.526	Ornithorhynchus_anatinus
ENSGAFG00000005029	larsb	100	77.618	ENSOCUG00000015684	LARS	100	77.618	Oryctolagus_cuniculus
ENSGAFG00000005029	larsb	100	92.230	ENSORLG00000001622	larsb	100	92.230	Oryzias_latipes
ENSGAFG00000005029	larsb	100	92.230	ENSORLG00020019950	larsb	100	92.230	Oryzias_latipes_hni
ENSGAFG00000005029	larsb	100	92.399	ENSORLG00015003895	larsb	100	92.399	Oryzias_latipes_hsok
ENSGAFG00000005029	larsb	100	92.483	ENSOMEG00000005677	larsb	100	92.483	Oryzias_melastigma
ENSGAFG00000005029	larsb	97	75.350	ENSOGAG00000008750	LARS	100	76.000	Otolemur_garnettii
ENSGAFG00000005029	larsb	99	77.599	ENSOARG00000002454	-	100	77.599	Ovis_aries
ENSGAFG00000005029	larsb	100	77.449	ENSOARG00000015911	-	99	77.534	Ovis_aries
ENSGAFG00000005029	larsb	99	78.088	ENSPPAG00000027964	LARS	99	78.088	Pan_paniscus
ENSGAFG00000005029	larsb	100	78.209	ENSPPRG00000023492	LARS	100	78.209	Panthera_pardus
ENSGAFG00000005029	larsb	100	78.041	ENSPTIG00000013110	LARS	100	78.041	Panthera_tigris_altaica
ENSGAFG00000005029	larsb	100	77.956	ENSPTRG00000017372	LARS	100	77.956	Pan_troglodytes
ENSGAFG00000005029	larsb	100	77.956	ENSPANG00000002663	LARS	100	77.872	Papio_anubis
ENSGAFG00000005029	larsb	98	84.629	ENSPKIG00000006650	larsb	100	80.896	Paramormyrops_kingsleyae
ENSGAFG00000005029	larsb	99	78.783	ENSPSIG00000015641	LARS	100	78.529	Pelodiscus_sinensis
ENSGAFG00000005029	larsb	68	92.500	ENSPMGG00000019556	LARS	100	92.500	Periophthalmus_magnuspinnatus
ENSGAFG00000005029	larsb	100	72.152	ENSPEMG00000010933	Lars	100	72.152	Peromyscus_maniculatus_bairdii
ENSGAFG00000005029	larsb	51	60.992	ENSPMAG00000005301	larsb	99	60.992	Petromyzon_marinus
ENSGAFG00000005029	larsb	100	76.098	ENSPCIG00000030572	LARS	100	76.098	Phascolarctos_cinereus
ENSGAFG00000005029	larsb	100	97.551	ENSPFOG00000002361	larsb	100	97.551	Poecilia_formosa
ENSGAFG00000005029	larsb	100	97.297	ENSPLAG00000016550	larsb	100	97.297	Poecilia_latipinna
ENSGAFG00000005029	larsb	100	97.466	ENSPMEG00000018422	larsb	100	97.466	Poecilia_mexicana
ENSGAFG00000005029	larsb	100	96.959	ENSPREG00000005668	larsb	100	96.959	Poecilia_reticulata
ENSGAFG00000005029	larsb	99	76.565	ENSPPYG00000015908	LARS	97	76.565	Pongo_abelii
ENSGAFG00000005029	larsb	86	65.290	ENSPCAG00000005621	LARS	96	64.798	Procavia_capensis
ENSGAFG00000005029	larsb	100	76.774	ENSPCOG00000019325	LARS	100	76.774	Propithecus_coquereli
ENSGAFG00000005029	larsb	96	70.140	ENSPVAG00000011237	LARS	99	70.490	Pteropus_vampyrus
ENSGAFG00000005029	larsb	100	92.652	ENSPNYG00000015254	larsb	100	92.652	Pundamilia_nyererei
ENSGAFG00000005029	larsb	100	85.726	ENSPNAG00000027191	larsb	100	85.726	Pygocentrus_nattereri
ENSGAFG00000005029	larsb	100	75.949	ENSRNOG00000018304	Lars	100	75.949	Rattus_norvegicus
ENSGAFG00000005029	larsb	94	77.110	ENSRBIG00000043198	LARS	100	76.555	Rhinopithecus_bieti
ENSGAFG00000005029	larsb	90	45.882	YPL160W	CDC60	99	45.882	Saccharomyces_cerevisiae
ENSGAFG00000005029	larsb	100	75.106	ENSSBOG00000026661	LARS	100	78.507	Saimiri_boliviensis_boliviensis
ENSGAFG00000005029	larsb	100	77.722	ENSSHAG00000006084	LARS	100	77.722	Sarcophilus_harrisii
ENSGAFG00000005029	larsb	97	85.052	ENSSFOG00015018117	larsb	90	85.052	Scleropages_formosus
ENSGAFG00000005029	larsb	88	92.042	ENSSMAG00000004078	larsb	97	91.946	Scophthalmus_maximus
ENSGAFG00000005029	larsb	100	92.905	ENSSDUG00000021142	larsb	100	92.905	Seriola_dumerili
ENSGAFG00000005029	larsb	100	92.905	ENSSLDG00000007054	larsb	100	92.905	Seriola_lalandi_dorsalis
ENSGAFG00000005029	larsb	85	70.000	ENSSARG00000013481	LARS	83	75.862	Sorex_araneus
ENSGAFG00000005029	larsb	100	77.909	ENSSPUG00000013805	LARS	99	78.228	Sphenodon_punctatus
ENSGAFG00000005029	larsb	100	93.243	ENSSPAG00000012124	larsb	100	93.243	Stegastes_partitus
ENSGAFG00000005029	larsb	100	74.493	ENSSSCG00000014411	LARS	100	74.493	Sus_scrofa
ENSGAFG00000005029	larsb	99	78.022	ENSTGUG00000000092	-	99	77.853	Taeniopygia_guttata
ENSGAFG00000005029	larsb	100	89.189	ENSTRUG00000005358	larsb	100	89.189	Takifugu_rubripes
ENSGAFG00000005029	larsb	99	85.450	ENSTNIG00000018214	larsb	100	85.366	Tetraodon_nigroviridis
ENSGAFG00000005029	larsb	91	75.889	ENSTBEG00000003757	LARS	94	75.889	Tupaia_belangeri
ENSGAFG00000005029	larsb	96	75.285	ENSTTRG00000016712	LARS	96	75.285	Tursiops_truncatus
ENSGAFG00000005029	larsb	94	79.122	ENSUAMG00000019907	LARS	99	79.122	Ursus_americanus
ENSGAFG00000005029	larsb	100	78.041	ENSUMAG00000010585	LARS	100	78.041	Ursus_maritimus
ENSGAFG00000005029	larsb	92	77.181	ENSVPAG00000000557	LARS	92	77.181	Vicugna_pacos
ENSGAFG00000005029	larsb	100	78.294	ENSVVUG00000021124	LARS	100	78.294	Vulpes_vulpes
ENSGAFG00000005029	larsb	100	79.258	ENSXETG00000002320	lars	100	79.089	Xenopus_tropicalis
ENSGAFG00000005029	larsb	100	97.466	ENSXMAG00000001454	larsb	100	97.466	Xiphophorus_maculatus